BDGP Sequence Production Resources |
Search the DGRC for LD43819
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 438 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1416-RA |
Protein status: | LD43819.pep: gold |
Preliminary Size: | 1774 |
Sequenced Size: | 1594 |
Gene | Date | Evidence |
---|---|---|
CG1416 | 2001-01-01 | Release 2 assignment |
CG1416 | 2002-06-10 | Blastp of sequenced clone |
CG1416 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1416 | 2008-04-29 | Release 5.5 accounting |
CG1416 | 2008-08-15 | Release 5.9 accounting |
CG1416 | 2008-12-18 | 5.12 accounting |
1594 bp (1594 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121650
> LD43819.complete GTGGCAACGCTGCCAACATATGTGTGCACTGGCATCGATAATTTTTACAT CCCTATTTTGAACCGCAGAATTCTAGAAAATTCCACTCGCTGGCCATAGT AATTGTCCGAATTAGTTTAAGCTAAGACTGCCGGATCAAAAGTAAACCAA CATCTTCCATCTTTTCATAAAATTGAAGACAGTTTCATACAATTCTACAG TAAGAAAGCGATGGCCAAGTGGGGAGAAGGAGATCCGCGCTGGATTGTGG AGGAGCGGCCCGACGCCACCAACGTGAACAACTGGCACTGGACGGAAAAG AACGCCACGCCATGGTCCAAGGACCGCCTGCATCAGCTTTTTCAGGATTT CAAAATAGGGCAAAGCGACATTGAGTGTGCCGTGGACTCCGTGGACAAAT GCTCCGGGGAGGCCACCGTGAACAATCGCAAGGGCAAGCTCATATTTTTC TACGAGTGGGAGCTGGTGCTCAAGTGGTCTGGAAAGCTCCTAAAGAACAG CAAGCTGATCCACAAGGGCAAGTTAACCATTCCCAATCTCTCCGAGGAGA ACGAACTAGCCGACGTAGAGATCACGGTGACAATCGACGAGTCCAACGAC GAGTCGGAGACCCTGAAACAGTTCATGTACAACGTGGGACGAGACCGCGT GCGGCAGCAACTGGCTTCCTACATCCGAGAGTTGAAGGAGGAGTACTCCA AGAACCTTATCCTACCAAAGAAGGGCGACGAGGCCGGAGCGGGAAATACT GTGGCGAATTTTAAGGATGCCAACAATACCCGTAATGCAGCCCAAAATAT CGCTTTAAACTCCTCGGTGGCGGCTCCTAGGCTGAAGAACTCTGGCATCG GCTGTAAACTGGACGTTCGCACTCTCTCGATGACCGAAGAATTTCACTGC AGCGCCAATGACCTTTACAACGCTCTCACAAAGCCAGAAATGGTCACTGC CTTTACGAGGGCACCTGCCAAAGTAGATGCCGTGCGCGGTGGAGAATTTA TTCTTTACGGAGGCAATGTGCTCGGAAAATTCGAAGAGCTCGTCCCTGAA AAAAAAATACAGCAGAGCTGGCGTCTGAAAAACTGGACATCTGGTCACTA CTCAAACGTTGTCATAGAGCTGGAAGAAACTTCATCCAGCACAATGATGT CGCTCAAGCAGACCGGGATACCCGCGTCCGAATTTGATGCGATGAAGACA AACTGGTACCGATATTACTGGCATAGCATCAAACAGACCTTTGGATTCGG TACCTCAATATCTGATGCCTTATAAGAGGACGCTTCTAGTGCGGATTGCA CTGAATGATTGAGGGCTTGGTGTATGGCGGATTATCGAAGGATTATTATT TGTATTCAACCTAGAGTACTGCGAGAATTTCATTTCCAATCATAACTGTA ATTTCTGTTTATCCTTAGAGGCTTTTTCAAATCCTCTTAGGTATATCGAT CGAACTGGAAAGTCCGCGGCTCGCTAAAAAAACACATTACTTACAAAAAA TCGAATACAATTCAGGCATTCGACATTGATTTCACACATTGAGAAACAAT AAACAATAATTTAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1416-RA | 1743 | CG1416-RA | 96..1666 | 1..1571 | 7855 | 100 | Plus |
CG1416-RB | 1684 | CG1416-RB | 237..1607 | 201..1571 | 6855 | 100 | Plus |
CG1416-RC | 1465 | CG1416-RC | 99..1465 | 201..1567 | 6835 | 100 | Plus |
CG1416-RB | 1684 | CG1416-RB | 96..236 | 1..141 | 705 | 100 | Plus |
CG1416-RC | 1465 | CG1416-RC | 1..98 | 1..98 | 490 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21756977..21757615 | 357..995 | 3165 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 21759011..21759446 | 1132..1567 | 2180 | 100 | Plus |
chr2L | 23010047 | chr2L | 21756539..21756897 | 1..359 | 1795 | 100 | Plus |
chr2L | 23010047 | chr2L | 21757768..21757903 | 996..1131 | 665 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21758440..21759078 | 357..995 | 3195 | 100 | Plus |
2L | 23513712 | 2L | 21760480..21760919 | 1132..1571 | 2200 | 100 | Plus |
2L | 23513712 | 2L | 21758002..21758360 | 1..359 | 1795 | 100 | Plus |
2L | 23513712 | 2L | 21759231..21759366 | 996..1131 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21758440..21759078 | 357..995 | 3195 | 100 | Plus |
2L | 23513712 | 2L | 21760480..21760919 | 1132..1571 | 2200 | 100 | Plus |
2L | 23513712 | 2L | 21758002..21758360 | 1..359 | 1795 | 100 | Plus |
2L | 23513712 | 2L | 21759231..21759366 | 996..1131 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 644..746 | 493..597 | 113 | 63.9 | Plus |
flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 189..266 | 1489..1567 | 113 | 62 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21756539..21756896 | 1..358 | 100 | -> | Plus |
chr2L | 21756979..21757615 | 359..995 | 99 | -> | Plus |
chr2L | 21757768..21757903 | 996..1131 | 99 | -> | Plus |
chr2L | 21759011..21759433 | 1132..1554 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RC | 1..1065 | 211..1275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RC | 1..1065 | 211..1275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1065 | 211..1275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RC | 1..1065 | 211..1275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1065 | 211..1275 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1567 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1567 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1559 | 9..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1567 | 1..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1416-RA | 1..1559 | 9..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21758002..21758359 | 1..358 | 100 | -> | Plus |
2L | 21758442..21759078 | 359..995 | 100 | -> | Plus |
2L | 21759231..21759366 | 996..1131 | 100 | -> | Plus |
2L | 21760480..21760915 | 1132..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21758002..21758359 | 1..358 | 100 | -> | Plus |
2L | 21758442..21759078 | 359..995 | 100 | -> | Plus |
2L | 21759231..21759366 | 996..1131 | 100 | -> | Plus |
2L | 21760480..21760915 | 1132..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21758002..21758359 | 1..358 | 100 | -> | Plus |
2L | 21758442..21759078 | 359..995 | 100 | -> | Plus |
2L | 21759231..21759366 | 996..1131 | 100 | -> | Plus |
2L | 21760480..21760915 | 1132..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21758002..21758359 | 1..358 | 100 | -> | Plus |
arm_2L | 21758442..21759078 | 359..995 | 100 | -> | Plus |
arm_2L | 21759231..21759366 | 996..1131 | 100 | -> | Plus |
arm_2L | 21760480..21760915 | 1132..1567 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21758002..21758359 | 1..358 | 100 | -> | Plus |
2L | 21758442..21759078 | 359..995 | 100 | -> | Plus |
2L | 21759231..21759366 | 996..1131 | 100 | -> | Plus |
2L | 21760480..21760915 | 1132..1567 | 100 | Plus |
Translation from 210 to 1274
> LD43819.pep MAKWGEGDPRWIVEERPDATNVNNWHWTEKNATPWSKDRLHQLFQDFKIG QSDIECAVDSVDKCSGEATVNNRKGKLIFFYEWELVLKWSGKLLKNSKLI HKGKLTIPNLSEENELADVEITVTIDESNDESETLKQFMYNVGRDRVRQQ LASYIRELKEEYSKNLILPKKGDEAGAGNTVANFKDANNTRNAAQNIALN SSVAAPRLKNSGIGCKLDVRTLSMTEEFHCSANDLYNALTKPEMVTAFTR APAKVDAVRGGEFILYGGNVLGKFEELVPEKKIQQSWRLKNWTSGHYSNV VIELEETSSSTMMSLKQTGIPASEFDAMKTNWYRYYWHSIKQTFGFGTSI SDAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21442-PA | 356 | GF21442-PA | 1..356 | 1..354 | 1691 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21345-PA | 354 | GG21345-PA | 1..354 | 1..354 | 1813 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10442-PA | 361 | GH10442-PA | 1..361 | 1..354 | 1515 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1416-PC | 354 | CG1416-PC | 1..354 | 1..354 | 1870 | 100 | Plus |
CG1416-PB | 354 | CG1416-PB | 1..354 | 1..354 | 1870 | 100 | Plus |
CG1416-PA | 354 | CG1416-PA | 1..354 | 1..354 | 1870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17698-PA | 361 | GI17698-PA | 1..355 | 1..349 | 1456 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25651-PA | 357 | GL25651-PA | 1..357 | 1..354 | 1556 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12794-PA | 357 | GA12794-PA | 1..357 | 1..354 | 1556 | 81.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16143-PA | 354 | GM16143-PA | 1..354 | 1..354 | 1823 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24332-PA | 354 | GD24332-PA | 1..354 | 1..354 | 1841 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11322-PA | 358 | GJ11322-PA | 1..358 | 1..354 | 1544 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18713-PA | 356 | GK18713-PA | 1..356 | 1..354 | 1575 | 81.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12927-PA | 350 | GE12927-PA | 1..350 | 1..354 | 1787 | 94.1 | Plus |
Translation from 210 to 1274
> LD43819.hyp MAKWGEGDPRWIVEERPDATNVNNWHWTEKNATPWSKDRLHQLFQDFKIG QSDIECAVDSVDKCSGEATVNNRKGKLIFFYEWELVLKWSGKLLKNSKLI HKGKLTIPNLSEENELADVEITVTIDESNDESETLKQFMYNVGRDRVRQQ LASYIRELKEEYSKNLILPKKGDEAGAGNTVANFKDANNTRNAAQNIALN SSVAAPRLKNSGIGCKLDVRTLSMTEEFHCSANDLYNALTKPEMVTAFTR APAKVDAVRGGEFILYGGNVLGKFEELVPEKKIQQSWRLKNWTSGHYSNV VIELEETSSSTMMSLKQTGIPASEFDAMKTNWYRYYWHSIKQTFGFGTSI SDAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1416-PC | 354 | CG1416-PC | 1..354 | 1..354 | 1870 | 100 | Plus |
CG1416-PB | 354 | CG1416-PB | 1..354 | 1..354 | 1870 | 100 | Plus |
CG1416-PA | 354 | CG1416-PA | 1..354 | 1..354 | 1870 | 100 | Plus |