BDGP Sequence Production Resources |
Search the DGRC for LD43863
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 438 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4497-RA |
Protein status: | LD43863.pep: gold |
Preliminary Size: | 2704 |
Sequenced Size: | 2581 |
Gene | Date | Evidence |
---|---|---|
CG4497 | 2001-01-01 | Release 2 assignment |
CG4497 | 2002-06-17 | Blastp of sequenced clone |
CG4497 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4497 | 2008-04-29 | Release 5.5 accounting |
CG4497 | 2008-08-15 | Release 5.9 accounting |
CG4497 | 2008-12-18 | 5.12 accounting |
2581 bp (2581 high quality bases) assembled on 2002-06-17
GenBank Submission: AY128449
> LD43863.complete TCAACACTATAAAAAAACTAAACTGGTAGCTGAAAATTACAATCACAGGA CATAATTTTATAAACGCCAATGGAATCGGAGACGAAAGCGAGCGCCGAGG AGAAGCAGCAGGAGAACCCCTCGACAGTGCCCATGGACACGCTGGATCCG CCGCCACCGTGTGGCAGCTCCAAGACCCTCAAACGCTGCCTCAGTGTGCC AATAATCCGGACTCCGCCGGCGGGCAAATCGGGAAAGACGCCGATGACCA CACGCGCAGCCGCAGCGGCTGCTCTGGCGGCCAAGGAGCACGAGCAGACG CCCAAGAAGAGCCAACAGGTGGTGGATATCCAAATGCCGAATGCCCCATC CATCGATTGCTTCGGCAAGAACATACACATACGATCGCAGCCCAATTCCA GGGAGGTTTCACCGGCTCCCGTCTTCAATATATTCACACCTCGAGCCAGA AGGTATTCGGCCAGCTATAGTCCACTGACCACGGCAGCCAATGGAGCCAC TCTCTGTCTCACGCCTCGAGTTTCGCAGCTGCGGCAGGAGGAATGCGCAG ATCTAAACAGCCGGGAGGTTAACCATGAGCGGGAAGTTCATCGGGAAATA CAAATTTCGCAGAGCTGGGAGGATCTCACGCTGGTGGCCGAGAACTGGTC GTGCAAATCGGACGAGTTCTCCAATCCCCTGCAGGTCAGCCTGCCACCCA CCGGCACCACCAGCTGCTCCAGTCCCAGTCCCACAAACAATCGCGCGGGC ATGAGATTACCATACTCCCCGTCGCCGACGAGACGTACTTTCGCCACCAG GCGGTCGATGTCTCCCATAGCCATGAGGCCATCCCAGCTGGGACCCGTGA AGAGAAAATTTGAGCTGGACGATAACCCCACTCAGGGCAGCAACTGGAGC GTGTACTCACCTCCGCCTGTGAAGAAGATATTCACGGAAAGTCGCGGCTC CTCACCGGTGTGCCAATCGCCCTCGTCGGTGTGTCCCAGTCCCGATTCCG GAACCTTTGACGGCCGCCTCACGCCCAAGTTGTTCATCTCGAAGCTGTGC ACAAGCAATTCGGTGAGCGGAAATGGGATAAATAACAATAGCAGCAGCTC GGGATGTCCGTCGCCTGTTTCCGCCTCGCCCGGAGGTGTTGGCAGCGGTC CCAATCTGGAGGCAGCCATGTGCCTCGTTTCCGGCGGCAGTCAGAGCCAA AGCATCGACGAGGGTATCTCGATACCCGAATCGGAGACGCACTCCTGCCG CAGTCGCACCTCTTCCATAGTGTCCACCGCATCGTCCAGTACGCAGGTGC TGGTCAACGACCTGGTGGATGATGCCACTCTGATGGACGATGCCAAAAGT GAGACCTCATCGATCGGTGGATGCTCCACCATTAGCATAGAGTCATCCTC CTGCGATAGTGGTGCCAAGACGGCTGCCACTTTCCTGAATCGCCTGGTGG TTGATTCCGATGGCGGTGGTTCGCCGCTGGCCCAAAAGAGCTTCTACATT AACAAGCAGGGATTGTCGGGCGCCAAGAAGTTTGTGGTCAATCACGAGCG AACGGGAGCCGTCAGCAAAGATGTGCCGCAAAAGCTTTAAGAACATACAC AGATTAACTTAGTTTAGGGGTCGATTTTAGGAAATTCTAAGAAATGCTTA TAATCTCAGGAGCCAAAAGTTAATCATTGCTGCACTTTAGCTGATTTGTT TTGAATGCTTTAGAAAATATTTTCGAATAAAATTGCATAGCTTGATCATT TTTAAGTTCTAAAACTCAACCAAAGGTTTTGTTATAAAAACCACAAGCAA TATTTTTTTAGAAAGAAAATTGAATTAAGAATACCTTTGGTGTAATATGT AAAGGATTAAAAATGGTTTAAAATGTATATTTCCCGTAGTGTTCAAAACA AATCTTCGTGGAAGAGACAAAAGATAAATTAGTGGTACTTTGATTTTTGT TTAAGAAAATCGACCCGAAATAACCAATTACACACACACGCTTAAGTTGA GAGTTTCAAAAGATCCTCCGACTTGCTTAACTTTAGATCGTAGCTTTGTT GTACATAGTTAAGTTGTTTGTCTGAAGTTCTAAACCATCTTGCATATCAT TTAACGCTGCGCACTTCCCTTCACCCCTAGAATCAATCGGTTTTAATATG TTAGCCTAAGGTTCACTATACTATATATAGCCAGAGTTTATTGCCTCGAT CTTTGTGTTATAGAATGTTTTCCCATTTCCAATGTTTCGGTTAATAATCG ACGTACATTAGTTTTGTTTTTAGTCGCCACCTCACCCCTTAGATATTAGG AAGAAAACCCCAATTTTGCCAAATATGTTTATTCTATGCTTATGTGTAAT AATATATCCAGCATTATATTGCCTATAATGTGATCCAATTTAGCGCGGAT ATCTGCGCGTATCCCACAAAAACCTTACTGATATAGTAACGCATATATTA TATAGATTTACGATCCGATTCTAATTATCGTAAGCGAATTTACATAGTTT CAAGAAAAAAAGTTATACTTAAAAAGGATCCAAAAAGAAATACACATTTT TTCAATTGATCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 7189447..7191068 | 2561..940 | 8065 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 7191503..7192384 | 941..60 | 4410 | 100 | Minus |
chr2L | 23010047 | chr2L | 7193356..7193418 | 63..1 | 300 | 98.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 7189447..7191066 | 942..2561 | 99 | <- | Minus |
chr2L | 7191503..7192384 | 60..941 | 100 | <- | Minus |
chr2L | 7193360..7193418 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 1..1521 | 70..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RB | 1..1521 | 70..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 1..1521 | 70..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 1..1521 | 70..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 1..1521 | 70..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 5..1594 | 1..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RB | 181..2741 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 6..2566 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 5..1594 | 1..1590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4497-RA | 6..2566 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7192492..7193373 | 60..941 | 100 | <- | Minus |
2L | 7194350..7194408 | 1..59 | 100 | Minus | |
2L | 7190431..7192050 | 942..2561 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7192492..7193373 | 60..941 | 100 | <- | Minus |
2L | 7194350..7194408 | 1..59 | 100 | Minus | |
2L | 7190431..7192050 | 942..2561 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7192492..7193373 | 60..941 | 100 | <- | Minus |
2L | 7194350..7194408 | 1..59 | 100 | Minus | |
2L | 7190431..7192050 | 942..2561 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 7190431..7192050 | 942..2561 | 100 | <- | Minus |
arm_2L | 7192492..7193373 | 60..941 | 100 | <- | Minus |
arm_2L | 7194350..7194408 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7190431..7192050 | 942..2561 | 100 | <- | Minus |
2L | 7192492..7193373 | 60..941 | 100 | <- | Minus |
2L | 7194350..7194408 | 1..59 | 100 | Minus |
Translation from 69 to 1589
> LD43863.hyp MESETKASAEEKQQENPSTVPMDTLDPPPPCGSSKTLKRCLSVPIIRTPP AGKSGKTPMTTRAAAAAALAAKEHEQTPKKSQQVVDIQMPNAPSIDCFGK NIHIRSQPNSREVSPAPVFNIFTPRARRYSASYSPLTTAANGATLCLTPR VSQLRQEECADLNSREVNHEREVHREIQISQSWEDLTLVAENWSCKSDEF SNPLQVSLPPTGTTSCSSPSPTNNRAGMRLPYSPSPTRRTFATRRSMSPI AMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVKKIFTESRGSSPVCQS PSSVCPSPDSGTFDGRLTPKLFISKLCTSNSVSGNGINNNSSSSGCPSPV SASPGGVGSGPNLEAAMCLVSGGSQSQSIDEGISIPESETHSCRSRTSSI VSTASSSTQVLVNDLVDDATLMDDAKSETSSIGGCSTISIESSSCDSGAK TAATFLNRLVVDSDGGGSPLAQKSFYINKQGLSGAKKFVVNHERTGAVSK DVPQKL*
Translation from 69 to 1589
> LD43863.pep MESETKASAEEKQQENPSTVPMDTLDPPPPCGSSKTLKRCLSVPIIRTPP AGKSGKTPMTTRAAAAAALAAKEHEQTPKKSQQVVDIQMPNAPSIDCFGK NIHIRSQPNSREVSPAPVFNIFTPRARRYSASYSPLTTAANGATLCLTPR VSQLRQEECADLNSREVNHEREVHREIQISQSWEDLTLVAENWSCKSDEF SNPLQVSLPPTGTTSCSSPSPTNNRAGMRLPYSPSPTRRTFATRRSMSPI AMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVKKIFTESRGSSPVCQS PSSVCPSPDSGTFDGRLTPKLFISKLCTSNSVSGNGINNNSSSSGCPSPV SASPGGVGSGPNLEAAMCLVSGGSQSQSIDEGISIPESETHSCRSRTSSI VSTASSSTQVLVNDLVDDATLMDDAKSETSSIGGCSTISIESSSCDSGAK TAATFLNRLVVDSDGGGSPLAQKSFYINKQGLSGAKKFVVNHERTGAVSK DVPQKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24428-PA | 509 | GF24428-PA | 1..509 | 1..506 | 2167 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23548-PA | 506 | GG23548-PA | 1..506 | 1..506 | 2609 | 98.2 | Plus |
Dere\GG10879-PA | 220 | GG10879-PA | 10..194 | 102..286 | 950 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13160-PA | 514 | GH13160-PA | 1..514 | 22..506 | 1595 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4497-PB | 506 | CG4497-PB | 1..506 | 1..506 | 2618 | 100 | Plus |
CG4497-PA | 506 | CG4497-PA | 1..506 | 1..506 | 2618 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17800-PA | 544 | GI17800-PA | 17..544 | 2..506 | 1616 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16229-PA | 403 | GL16229-PA | 1..229 | 1..224 | 833 | 76.6 | Plus |
Dper\GL16229-PA | 403 | GL16229-PA | 264..403 | 367..506 | 531 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18223-PA | 516 | GA18223-PA | 1..516 | 1..506 | 1834 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13618-PA | 506 | GM13618-PA | 1..506 | 1..506 | 2633 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22509-PA | 506 | GD22509-PA | 1..506 | 1..506 | 2623 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17624-PA | 545 | GJ17624-PA | 36..545 | 20..506 | 1581 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24735-PA | 546 | GK24735-PA | 1..546 | 1..506 | 1617 | 69.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18373-PA | 506 | GE18373-PA | 1..506 | 1..506 | 2610 | 98.4 | Plus |