BDGP Sequence Production Resources |
Search the DGRC for LD43876
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 438 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | unc-119-RA |
Protein status: | LD43876.pep: gold |
Preliminary Size: | 1192 |
Sequenced Size: | 2030 |
Gene | Date | Evidence |
---|---|---|
CG1659 | 2002-05-30 | Blastp of sequenced clone |
unc-119 | 2008-04-29 | Release 5.5 accounting |
unc-119 | 2008-08-15 | Release 5.9 accounting |
unc-119 | 2008-12-18 | 5.12 accounting |
2030 bp (2030 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118580
> LD43876.complete CTGAGTAGTGCAAAAAAAGTGGGCAAAAAAGGTGCAATGTTTAGCGTTTA AGTGCGTTAAGTTGCTTTTGCGGACGACAACAACAACACCAGCAGCATTG CCGGTCAAATTGATCTAATTGATTTTCGGGCAGTGCCAACAGCAACTAAA ACCAAATTAATAAATGAATCCCTGCGCATACATAAACATATAAAAACACA CACACACACACATACATTCGCATAAAGGACGCGAACCGAAAAGGGAAAAA CAAACACAAAGGAAAAAAAAAGGAAAAAGGAGAGCGCAGCTTTTTCAGAA ATTGGGTCATTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGTTGCTGGTGA TTTTCAAACGAATTTCATTTGTTGCTGTCGTCGTCGGTTCGGTGTTGTTG TTGTTGTTGCTGTTGTTGCAATGGTCGTGGACGTTGTTGTCGCTGACAGC TAAATGTTATGGCAACACTTGCAACCTGAATTCGTGTGGTGAGGAGCGGA AAGCGAAAGGATAATAGGGTAGCGGAGACGAAGCCTTATATTTCCACCAG AAAATCCTGGCACAATTTATGACAACTCTACACTTGTGTGTGTTTGTGTT GAGTGAGACAGCGGAGTAGCTTCTTCAAATCAAAGGATACCACTGCAGCA GCCATCCAGCCAGGAGCCTTAAAAAAGCTGTTCAGCTTGAGAAATCCGAA ACGCAGACTATAGACAAATAATACCACCAGATTCATTCCGTGCACAATGA GCGTGGTGGGTAAGCAACTAAATCCGGTGCAATCCTCCGGTGCAGGCGCA GTGACAACGTCTTCCTCCGCGGCCGCAGGATCCTCTTCTTCGAACAGTGG AGTGGAGGCCAACGGCGGCAGTGGAGGATCGTCGGGAGCTGCAGCAGCGG GCGCTGGTGCCTCCGGTGATGCCAAACGGCCTGCGGAGTCTTCCAGCGTG ACTCCCGACGAGGTGCTCCATCTGACCAAGATCACGGACGACTATCTCTG CTCCGCCAATGCAAATGTGTTCGAGATTGATTTCACGCGGTTCAAGATTC GCGACCTGGAGAGCGGCGCTGTGCTCTTCGAGATCGCCAAACCGCCGAGT GAACAATATCCGGAAGGACTGTCCTCGGATGAAACCATGCTGGCGGCTGC CGAGAAATTGTCACTGGATGACACTGCCGATCCAAATGCCGGACGCTATG TGCGCTATCAGTTCACACCGGCATTTCTCAACCTCAAAACAGTGGGAGCC ACTGTGGAATTCACTGTGGGCAGCCAGCCGCTTAATAATTTTCGTATGAT CGAACGCCACTTCTTCCGCGATCGCCTGCTAAAGACGTTTGACTTTGAGT TCGGCTTTTGCTTTCCATTTTCGAAGAATACGGTTGAGCACATCTACGAG TTTCCTAACCTTCCACCCGACCTAGTTGCTGAGATGATATCGAGCCCCTT TGAGACGCGCTCGGACAGCTTTTACTTTGTGGGAAACCGACTCGTCATGC ACAACAAAGCCGACTACGCCTACGATGGCGGCAATATAGTCTAGAAACTC AACTATAATGGAACTGCAACTAGAGCAAAACTAATAACTAAAGAACTAGA AACTACAGAAGCTGTGAGACAAAATCAATGACTTGTCACACACACACACA CACGAAACACCCACTCAATGTCAACAATCACACTCACAAACACATCGAAT CGAATCGAGGAATATTATCACAGCCATTTTAGCCTTAGCACACCAAAGTT TTACCCACCATTCCTGTTTGATGTATTTAGCATCAAGATATGATCTCCTG CAAACGGAAACTAACACACAAACACAACAACAACACACTGAAGCACGCGG ATTGTGTTCATTTATCAATGATTTCCACTTTGACTATATAATTTTAAGTG CTATGTGATTTCCCTTGATTTATATATGTATTTGTACACACTTATTTAAT CCTAATAAGTAAGGACACTCCACACACACACCCAACAAGAAACAACAAAT ACATATATATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
unc-119-RA | 2687 | unc-119-RA | 274..2287 | 1..2014 | 10070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7181676..7182327 | 1252..601 | 3260 | 100 | Minus |
chrX | 22417052 | chrX | 7180611..7181198 | 2010..1423 | 2940 | 100 | Minus |
chrX | 22417052 | chrX | 7182720..7183208 | 489..1 | 2445 | 100 | Minus |
chrX | 22417052 | chrX | 7181437..7181609 | 1425..1253 | 865 | 100 | Minus |
chrX | 22417052 | chrX | 7182497..7182609 | 601..489 | 565 | 100 | Minus |
chr2R | 21145070 | chr2R | 10601724..10601766 | 311..353 | 185 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7289745..7290396 | 1252..601 | 3260 | 100 | Minus |
X | 23542271 | X | 7288676..7289267 | 2014..1423 | 2960 | 100 | Minus |
X | 23542271 | X | 7290789..7291277 | 489..1 | 2445 | 100 | Minus |
X | 23542271 | X | 7289506..7289678 | 1425..1253 | 865 | 100 | Minus |
X | 23542271 | X | 7290566..7290678 | 601..489 | 565 | 100 | Minus |
2R | 25286936 | 2R | 14714433..14714475 | 311..353 | 185 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7297843..7298494 | 1252..601 | 3260 | 100 | Minus |
X | 23527363 | X | 7296774..7297365 | 2014..1423 | 2960 | 100 | Minus |
X | 23527363 | X | 7298887..7299375 | 489..1 | 2445 | 100 | Minus |
X | 23527363 | X | 7297604..7297776 | 1425..1253 | 865 | 100 | Minus |
X | 23527363 | X | 7298664..7298776 | 601..489 | 565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6712..6849 | 446..312 | 232 | 65.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6727..6829 | 419..311 | 225 | 70.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6788..6921 | 445..312 | 219 | 65.4 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1054..1166 | 430..310 | 200 | 67.2 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2396 | 397..311 | 181 | 70 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2785..2822 | 348..311 | 154 | 89.5 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1143 | 399..312 | 154 | 67.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6796 | 400..311 | 149 | 67 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6775 | 354..311 | 148 | 81.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2490..2635 | 445..312 | 144 | 60.3 | Minus |
rover | 7318 | rover ROVER 7318bp | 973..1077 | 1957..1853 | 137 | 63.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2320..2362 | 354..312 | 134 | 79.1 | Minus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7950..7988 | 354..316 | 132 | 82.1 | Minus |
TART-C | 11124 | TART-C TARTC 11124bp | 9394..9432 | 354..316 | 132 | 82.1 | Minus |
roo | 9092 | roo DM_ROO 9092bp | 1095..1131 | 348..312 | 131 | 83.8 | Minus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3264..3334 | 380..312 | 124 | 67.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6417..6597 | 464..291 | 123 | 57.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7180652..7181195 | 1426..1969 | 100 | <- | Minus |
chrX | 7181437..7181609 | 1253..1425 | 100 | <- | Minus |
chrX | 7181676..7182326 | 602..1252 | 100 | <- | Minus |
chrX | 7182497..7182608 | 490..601 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 1..798 | 747..1544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 1..798 | 747..1544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 1..798 | 747..1544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 1..798 | 747..1544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 1..798 | 747..1544 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 28..2037 | 1..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 28..2037 | 1..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 22..2031 | 1..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 28..2037 | 1..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
unc-119-RA | 22..2031 | 1..2010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7289506..7289678 | 1253..1425 | 100 | <- | Minus |
X | 7288680..7289264 | 1426..2010 | 100 | <- | Minus |
X | 7289745..7290395 | 602..1252 | 100 | <- | Minus |
X | 7290566..7290677 | 490..601 | 100 | <- | Minus |
X | 7290789..7291277 | 1..489 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7289506..7289678 | 1253..1425 | 100 | <- | Minus |
X | 7288680..7289264 | 1426..2010 | 100 | <- | Minus |
X | 7289745..7290395 | 602..1252 | 100 | <- | Minus |
X | 7290566..7290677 | 490..601 | 100 | <- | Minus |
X | 7290789..7291277 | 1..489 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7289506..7289678 | 1253..1425 | 100 | <- | Minus |
X | 7288680..7289264 | 1426..2010 | 100 | <- | Minus |
X | 7289745..7290395 | 602..1252 | 100 | <- | Minus |
X | 7290566..7290677 | 490..601 | 100 | <- | Minus |
X | 7290789..7291277 | 1..489 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7184599..7184710 | 490..601 | 100 | <- | Minus |
arm_X | 7182713..7183297 | 1426..2010 | 100 | <- | Minus |
arm_X | 7183539..7183711 | 1253..1425 | 100 | <- | Minus |
arm_X | 7183778..7184428 | 602..1252 | 100 | <- | Minus |
arm_X | 7184822..7185310 | 1..489 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7296778..7297362 | 1426..2010 | 100 | <- | Minus |
X | 7297604..7297776 | 1253..1425 | 100 | <- | Minus |
X | 7297843..7298493 | 602..1252 | 100 | <- | Minus |
X | 7298664..7298775 | 490..601 | 100 | <- | Minus |
X | 7298887..7299375 | 1..489 | 100 | Minus |
Translation from 746 to 1543
> LD43876.pep MSVVGKQLNPVQSSGAGAVTTSSSAAAGSSSSNSGVEANGGSGGSSGAAA AGAGASGDAKRPAESSSVTPDEVLHLTKITDDYLCSANANVFEIDFTRFK IRDLESGAVLFEIAKPPSEQYPEGLSSDETMLAAAEKLSLDDTADPNAGR YVRYQFTPAFLNLKTVGATVEFTVGSQPLNNFRMIERHFFRDRLLKTFDF EFGFCFPFSKNTVEHIYEFPNLPPDLVAEMISSPFETRSDSFYFVGNRLV MHNKADYAYDGGNIV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21136-PA | 269 | GF21136-PA | 1..269 | 1..265 | 1069 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17629-PA | 266 | GG17629-PA | 1..266 | 1..265 | 1122 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24699-PA | 259 | GH24699-PA | 1..259 | 1..265 | 1046 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
unc-119-PC | 265 | CG1659-PC | 1..265 | 1..265 | 1359 | 100 | Plus |
unc-119-PA | 265 | CG1659-PA | 1..265 | 1..265 | 1359 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14666-PA | 270 | GI14666-PA | 1..267 | 1..262 | 1017 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14630-PA | 270 | GL14630-PA | 1..270 | 1..265 | 1032 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14080-PA | 270 | GA14080-PA | 1..270 | 1..265 | 1032 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17473-PA | 265 | GM17473-PA | 1..265 | 1..265 | 1173 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14739-PA | 261 | GJ14739-PA | 1..261 | 1..265 | 1041 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16385-PA | 275 | GK16385-PA | 1..275 | 1..265 | 1035 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17531-PA | 266 | GE17531-PA | 1..266 | 1..265 | 1133 | 90.2 | Plus |
Translation from 746 to 1543
> LD43876.hyp MSVVGKQLNPVQSSGAGAVTTSSSAAAGSSSSNSGVEANGGSGGSSGAAA AGAGASGDAKRPAESSSVTPDEVLHLTKITDDYLCSANANVFEIDFTRFK IRDLESGAVLFEIAKPPSEQYPEGLSSDETMLAAAEKLSLDDTADPNAGR YVRYQFTPAFLNLKTVGATVEFTVGSQPLNNFRMIERHFFRDRLLKTFDF EFGFCFPFSKNTVEHIYEFPNLPPDLVAEMISSPFETRSDSFYFVGNRLV MHNKADYAYDGGNIV*