BDGP Sequence Production Resources |
Search the DGRC for LD43883
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 438 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | Hpr1-RA |
Protein status: | LD43883.pep: gold |
Preliminary Size: | 1362 |
Sequenced Size: | 2296 |
Gene | Date | Evidence |
---|---|---|
CG2031 | 2001-01-01 | Release 2 assignment |
CG2031 | 2002-06-12 | Blastp of sequenced clone |
CG2031 | 2003-01-01 | Sim4 clustering to Release 3 |
Hpr1 | 2008-04-29 | Release 5.5 accounting |
Hpr1 | 2008-08-15 | Release 5.9 accounting |
Hpr1 | 2008-12-18 | 5.12 accounting |
2296 bp (2296 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122188
> LD43883.complete TGATGTTTTGATTGAAAAAACAAATTAGTTTATTGTTTTTATCTGTTGTC GCCAAAAATATTATTTAAATCAATATGAGCACCGCCGTAGAAGTGGCTAA CACGGCTCCGGAGAAGTTGGCCAACTACTTTGCGCTACAGTCGGCGTTTG AGAAAGCCCTTGAATTGGCCATCACCGACGGCAAAGTGGAGCTGTTGGTC AAGGAGTACAATAGATTCCCGGCCAACACCGAGCACGACAAGCGCTTACC CATGGACCACGCGTTCCGCGTGCTCCTGATGAAGCGGCTGGACGAAGATG TGAGTCGCATTGGAGAGCTTGTACGCCTCTCCGTGGAAGCCACGCGGGCC GAGATTGTGTCCAACACCATACCCGTGGTTCTGCTGATCGACACCTTCGA CGTGGTCACTCTGGACAAGTGCCAGAAGATATTTCAGTTTGTCGAGGATA TGGTGGAGGTGTGGAAGGAGGAGATCTTCTTTTCCTCATGCAAGAACAAC ATTCTACGCATGTGCAACGACCTGCTGCGTCGACTTTCGCGCACCCAGAA CACCGTCTTCTGTGGCCGCATCCAGCTTTTCCTCTCAAAGTTCTTTCCCT TTTCGGAGCGGTCTGGCCTCAACATCGTCTCCGAATTCAACCTGGACAAC TTTACGGAGTACGGTCTGGACAGCAAAGACCACGACGAAAGCGACAACAA GGAGCTGGAGGATACCGCTGAGGACATCCCCCTAAAGATCGACTACGACC TGTACTGCAAGTTTTGGTCGCTGCAGGACTTTTTCCGAAATCCCAACCAG TGTTACAATAAGCCGCAGTGGAAGATGTTCCAGATGCACGCTGACAACAT ACTACAGTCCTTCTCGAGCTTCAAGCTGGAAGACGTGCGCCAAAGTAGCA ACGAAAATGCGAGCGGTACTGACCAAGCAATGGATGTGGACGAGGAGGCA GTAGACACCACGGCGGTGTCTTCCGTCATCAAGGCGAATCACTTCTTCGC CAAGTTTCTAACCAATCCCAAGCTTTTGGCTCTGCAGCTCTCCGACGCTA ATTTTCGACGTGCTGTTCTGGTGCAGTTTCTAATTCTATTTCAGTACCTG CAAGTCAGTGTAAAGTTTAAAAGTGATACTCAAACCTTGACTGCAGACCA GGCGGACTTTATCAAGGAAACAGAGTCGCGTGTTTATAAGTTGCTAGAGG AGACACCACCGTACGGTAAGCGGTTTTCACGGACAGTGTATCACATGCTG GCCCGCGAAGAGATGTGGAACAACTGGAAGAACGAAGGCTGCAAGGAATT CAAGAAGCCCGAGGAACCAACTCTCAGCGAAGAGGACTCGAAGCCAACTC CCAATAAAAGACCGCGCCGTCCATTGGGCGATGCACTGCGCGATGCTTCC CGCAGCGGCAAGTTTTATTTGGGAAATGACAACCTAACACGTTTGTGGAA CTACTCTCCAGATAACTTGCAGGCCTGCAAAAGTGAACAGCGAAACTTCC TACCGCTGCTGGAGACATATTTAGAAACGCCGCACGAAAAGGTTGATCCC GCTTTTGAGTGGCGAGCTCTGCGCTTGCTTGCCCGCCAAACACCGCACTT CTTTACGTCGCTCTCTCAGCCATCGAGCAAGATCTCCGATTATCTTGAGC AAGTGCGCAAACGTCTCATCCGGGACAAAGAGCCCAAACCTGCTGCCCTT TTATCGAACAACTCTTCTGAGAACAATTTTGGCCTGTCGGTCAACAACGT TCATACGGAGGGCGAGCAGGATGCTACGGTCGCCCTTCAGGACGGTGAAC CAGAGCAGGATCTTGAAGTAGAGGACAACGAACCTGTGGTGGAAGAGGTG GATGAGGTACCGGCGCACGAGAAACCCCTTATGGTTACCAAAGAGCATAT CGAAGAGGTGGCGCCCCTTATAGGCGAGCCATGGATGAAGGTGGGAAAGA AGATTGGCTTCACCAACGATGAACTTCTCTTCTTTCAAATGGAGCATCCT ACGGCGAACGTGGCCTGCGTTAAGATGCTGACAAACTGGATATCCGATGA CGACGACGCCACCCTGGAAAACTGGGCGTACATGCTAGAGGGATTGGAGA TGAATAAGGCCGCCGAAGCGGTGAAGGCGATTATTGAGCGCGAAAAATCT GGATCCACTGCCGCCTTCTGCCTCCGGTAACGACGATGAGGTGCTCTCTG ATTAGCATCATCCCCATGCCGATCCCACCCTAGTTATTATAATTTCGTTT CAATCATAAAACTTCTTTATCACAAGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1644441..1645291 | 2277..1427 | 4255 | 100 | Minus |
chr3R | 27901430 | chr3R | 1646151..1646840 | 836..147 | 3435 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 1645346..1645650 | 1426..1122 | 1525 | 100 | Minus |
chr3R | 27901430 | chr3R | 1645707..1645994 | 1123..836 | 1440 | 100 | Minus |
chr3R | 27901430 | chr3R | 1646902..1647053 | 152..1 | 760 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5818790..5819644 | 2281..1427 | 4275 | 100 | Minus |
3R | 32079331 | 3R | 5820504..5821193 | 836..147 | 3435 | 99.9 | Minus |
3R | 32079331 | 3R | 5819699..5820003 | 1426..1122 | 1525 | 100 | Minus |
3R | 32079331 | 3R | 5820060..5820347 | 1123..836 | 1440 | 100 | Minus |
3R | 32079331 | 3R | 5821255..5821406 | 152..1 | 760 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5559621..5560475 | 2281..1427 | 4275 | 100 | Minus |
3R | 31820162 | 3R | 5561335..5562024 | 836..147 | 3435 | 99.8 | Minus |
3R | 31820162 | 3R | 5560530..5560834 | 1426..1122 | 1525 | 100 | Minus |
3R | 31820162 | 3R | 5560891..5561178 | 1123..836 | 1440 | 100 | Minus |
3R | 31820162 | 3R | 5562086..5562237 | 152..1 | 760 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1644441..1645291 | 1427..2277 | 100 | <- | Minus |
chr3R | 1645346..1645648 | 1124..1426 | 100 | <- | Minus |
chr3R | 1645707..1645993 | 837..1123 | 100 | <- | Minus |
chr3R | 1646151..1646834 | 153..836 | 100 | <- | Minus |
chr3R | 1646902..1647053 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 1..2106 | 75..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 1..2106 | 75..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 1..2106 | 75..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 1..2106 | 75..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 1..2106 | 75..2180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 22..2298 | 1..2277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 22..2298 | 1..2277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 35..2311 | 1..2277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 22..2298 | 1..2277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hpr1-RA | 35..2311 | 1..2277 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5818794..5819644 | 1427..2277 | 100 | <- | Minus |
3R | 5819699..5820001 | 1124..1426 | 100 | <- | Minus |
3R | 5820060..5820346 | 837..1123 | 100 | <- | Minus |
3R | 5820504..5821187 | 153..836 | 100 | <- | Minus |
3R | 5821255..5821406 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5818794..5819644 | 1427..2277 | 100 | <- | Minus |
3R | 5819699..5820001 | 1124..1426 | 100 | <- | Minus |
3R | 5820060..5820346 | 837..1123 | 100 | <- | Minus |
3R | 5820504..5821187 | 153..836 | 100 | <- | Minus |
3R | 5821255..5821406 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5818794..5819644 | 1427..2277 | 100 | <- | Minus |
3R | 5819699..5820001 | 1124..1426 | 100 | <- | Minus |
3R | 5820060..5820346 | 837..1123 | 100 | <- | Minus |
3R | 5820504..5821187 | 153..836 | 100 | <- | Minus |
3R | 5821255..5821406 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1644516..1645366 | 1427..2277 | 100 | <- | Minus |
arm_3R | 1645421..1645723 | 1124..1426 | 100 | <- | Minus |
arm_3R | 1645782..1646068 | 837..1123 | 100 | <- | Minus |
arm_3R | 1646226..1646909 | 153..836 | 100 | <- | Minus |
arm_3R | 1646977..1647128 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5559625..5560475 | 1427..2277 | 100 | <- | Minus |
3R | 5560530..5560832 | 1124..1426 | 100 | <- | Minus |
3R | 5560891..5561177 | 837..1123 | 100 | <- | Minus |
3R | 5561335..5562018 | 153..836 | 100 | <- | Minus |
3R | 5562086..5562237 | 1..152 | 100 | Minus |
Translation from 74 to 2179
> LD43883.pep MSTAVEVANTAPEKLANYFALQSAFEKALELAITDGKVELLVKEYNRFPA NTEHDKRLPMDHAFRVLLMKRLDEDVSRIGELVRLSVEATRAEIVSNTIP VVLLIDTFDVVTLDKCQKIFQFVEDMVEVWKEEIFFSSCKNNILRMCNDL LRRLSRTQNTVFCGRIQLFLSKFFPFSERSGLNIVSEFNLDNFTEYGLDS KDHDESDNKELEDTAEDIPLKIDYDLYCKFWSLQDFFRNPNQCYNKPQWK MFQMHADNILQSFSSFKLEDVRQSSNENASGTDQAMDVDEEAVDTTAVSS VIKANHFFAKFLTNPKLLALQLSDANFRRAVLVQFLILFQYLQVSVKFKS DTQTLTADQADFIKETESRVYKLLEETPPYGKRFSRTVYHMLAREEMWNN WKNEGCKEFKKPEEPTLSEEDSKPTPNKRPRRPLGDALRDASRSGKFYLG NDNLTRLWNYSPDNLQACKSEQRNFLPLLETYLETPHEKVDPAFEWRALR LLARQTPHFFTSLSQPSSKISDYLEQVRKRLIRDKEPKPAALLSNNSSEN NFGLSVNNVHTEGEQDATVALQDGEPEQDLEVEDNEPVVEEVDEVPAHEK PLMVTKEHIEEVAPLIGEPWMKVGKKIGFTNDELLFFQMEHPTANVACVK MLTNWISDDDDATLENWAYMLEGLEMNKAAEAVKAIIEREKSGSTAAFCL R*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18644-PA | 713 | GF18644-PA | 1..693 | 1..696 | 3104 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10810-PA | 713 | GG10810-PA | 1..697 | 1..697 | 3504 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17514-PA | 717 | GH17514-PA | 1..694 | 1..691 | 2928 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hpr1-PA | 701 | CG2031-PA | 1..701 | 1..701 | 3650 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10383-PA | 730 | GI10383-PA | 1..708 | 1..695 | 2816 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23216-PA | 718 | GL23216-PA | 1..697 | 1..696 | 3017 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15194-PA | 718 | GA15194-PA | 1..697 | 1..696 | 3017 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10588-PA | 701 | GM10588-PA | 1..701 | 1..701 | 3675 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19579-PA | 701 | GD19579-PA | 1..701 | 1..701 | 3677 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22844-PA | 720 | GJ22844-PA | 1..700 | 1..695 | 2853 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22628-PA | 710 | GK22628-PA | 4..692 | 3..691 | 2648 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24134-PA | 713 | GE24134-PA | 1..697 | 1..697 | 3496 | 94.4 | Plus |
Translation from 74 to 2179
> LD43883.hyp MSTAVEVANTAPEKLANYFALQSAFEKALELAITDGKVELLVKEYNRFPA NTEHDKRLPMDHAFRVLLMKRLDEDVSRIGELVRLSVEATRAEIVSNTIP VVLLIDTFDVVTLDKCQKIFQFVEDMVEVWKEEIFFSSCKNNILRMCNDL LRRLSRTQNTVFCGRIQLFLSKFFPFSERSGLNIVSEFNLDNFTEYGLDS KDHDESDNKELEDTAEDIPLKIDYDLYCKFWSLQDFFRNPNQCYNKPQWK MFQMHADNILQSFSSFKLEDVRQSSNENASGTDQAMDVDEEAVDTTAVSS VIKANHFFAKFLTNPKLLALQLSDANFRRAVLVQFLILFQYLQVSVKFKS DTQTLTADQADFIKETESRVYKLLEETPPYGKRFSRTVYHMLAREEMWNN WKNEGCKEFKKPEEPTLSEEDSKPTPNKRPRRPLGDALRDASRSGKFYLG NDNLTRLWNYSPDNLQACKSEQRNFLPLLETYLETPHEKVDPAFEWRALR LLARQTPHFFTSLSQPSSKISDYLEQVRKRLIRDKEPKPAALLSNNSSEN NFGLSVNNVHTEGEQDATVALQDGEPEQDLEVEDNEPVVEEVDEVPAHEK PLMVTKEHIEEVAPLIGEPWMKVGKKIGFTNDELLFFQMEHPTANVACVK MLTNWISDDDDATLENWAYMLEGLEMNKAAEAVKAIIEREKSGSTAAFCL R*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hpr1-PA | 701 | CG2031-PA | 1..701 | 1..701 | 3650 | 100 | Plus |