BDGP Sequence Production Resources |
Search the DGRC for LD44003
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 440 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9467-RA |
Protein status: | LD44003.pep: gold |
Sequenced Size: | 3185 |
Gene | Date | Evidence |
---|---|---|
CG9467 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9467 | 2004-10-02 | Blastp of sequenced clone |
CG9467 | 2008-04-29 | Release 5.5 accounting |
CG9467 | 2008-08-15 | Release 5.9 accounting |
CG9467 | 2008-12-18 | 5.12 accounting |
3185 bp (3185 high quality bases) assembled on 2004-10-02
GenBank Submission: BT016086
> LD44003.complete AATTTGCCCATCCCTAGTTTCTACAGTGCAGTGCAACAAATAATAAATAA ATAAATAGCCTGGCACAAAGAGTTAATCGAATAAATTGCACCCCGCAGCG CACGTCAAGTGGGTTGGGTACCGAAATCGCGAGTTATCTGCTCCGCTGAC GCCGCTGCCACTGCTCCGCCATATCAGTTGCTGATTGGAGCGCTGGGAGC ACGGAAGCCACACAAATAGAGGCGCATTTAGAGCAATCCCCACCGTCCGC TGCTGCGGCAGCCCGCGGGTCATCGGATTGCCATGTCCCACTTCACGCAT GCCTCCAGCAGCGACCTGGTCAACCTCAATGTGGGTGGTCAGCGCTTTTC CACGTCGCGGCAAACGCTTACGTGGATCCCGGACACCTTCTTCACGGCTC TTCTCAGCGGACGCATCTCGAGTCTCAGAGACGAGCACAATGCCATCTTT ATTGATCGCGATCCGACGCTCTTCTCGATCATACTTAACTACTTAAGGAC CAAGGACATCGACATCAAGAACTGCGAAATACGCGCTCTGCGCCATGAGG CCGAGTACTATGGCATCACGCCGCTGACCAAGCGCCTGGCCCTCTGCGAA GACCTTAACCACTCGTCCTGCGGTGATTTGCTGTTCTACGGATTTCTGGC GGCGCCGCCCATGCCGTCAAACGAAGCTGTGGCTGCTACTAGCGTTGACG AGTCATTGCCCTCCACTTCGGCCAGTGCGATTGGCAGTCGTCCTGGGTCC ATGGTGCGCGTTCCCGAACCCTCACGCTCCTCACACTCGCGCAATTCATC ATGGGATCTGCGCCTTGGTCGCACAGGTAGCACTGGCAATGGTGCCAATC CCCCAGCTCCCATGTTGCACTCACGTAATCCCTCGATTGACTTTATGCGC CACTCTCGGAACTCCTCGGCCGATCTGAACAAAGTCTTTCGAAACGAAGT TGGCCTGGTATTCAGTCCCACGCAGAACTCAAACTGGGTGGACCCGTTGC GAGTGCAAATCATTAAGGCGCACCAAAATTGGATAGCAGTGGCTTACGCA CACTTTGTGACTTGCTACCGGGTGAAAGACTCCAACGGATGGCAGCAGGT GTTCACATCGCCCCACATCGACGCCACTATCGAAAGAATCGCCATCAACT CAAAGGTGAATACTTCCGCAGCAGAGCCACTGCCCAGCAAGATGGTGGCC ATTTCTTACGGCAGTCAGATAAGATTGTGGAGCATTCAGGAGGGCGGCCA GAAAACGGATGTGGGCACGTTTAATTTAAATGTGCGAGTGGAGTACCTGT TCTTTATCGGCAGTCAGCTGGTGGCCCTGTCATCTTCCGGCAAGATCGGC GTCTGGCATGCGATGACGCAGCACTGGCAGATTCAGGACCTAGTGCCCGT GCTCTCATTCGATTCCGCAGGCTCTTTTTTGCTGCTGGGCTGCAACAACG GCTCCATTTACTACATAGACATGCAGAAGTTCCCGCTCCGGATAAAGGAC AATGATTTACTGGTTACCGAGCTCTACAAAGATGTCACACTAGACCCTAT CACGGCCATCTCGGTCTACCTTACCCCAAAAACCTCGAGCATAAGTGGCA ATTGGATTGAAATTGCCTATGGCACAAAGTCGGGAGCGGTTCGAATCATT GTCCAGCATCCGGAGACAGCTGGCCATGGACCACACCTGTTCGAGACCTT CTTTGTGCACCAAAGCCCCGTAACGAAGGTGATGCTGTCGGAGAAATACC TCGTCTCCGTGTGCAGCGAATACCACCACGTGCGAACATGGCGTCTGACC CGCTTCCGGGGCATGCTCTCCACCCAGCCGGGATCCACGCCGGAAGCATC GTTCAAAATCGTGTCGCTGGAAGCTACCGATACGAGCTACAGCTATGCGG CTGGAAATGATTTTGGACCTTACGGTGACTACGACGACATGATATTTGTG CAAAAGGTGGTGCCCGAGACGGATCAGCTGTACGTACGCTTGGCCTCCAA CGGTGATCGGGTGTGCGTCATTAGATCCGTAGATAGCTCCACAATTTCGG CCTTCTGTGTGCTCGAGTGCGAGGTATCGTCCCGGTTCATACTCACCGGT CACTGCAACGGCGCTATTCAAATGTGGGACCTAACCACTGCACTGGCGCT GCTCTCCAAGGATGAGCCGCAGCAGAAAATCAATGGCGGACCCGACACCA ATGAGCTTCTCCGCCTACTTGACCAGTGTGAAATCAGCAATTCATCATGC ACAACACCTTGTATGTCACCGTGTCTATCAGCTATGGGCAACGGCTCTGG AATGGCCTCCTCCATAGCCCGCATGAAAGCCAGCAACATAGCCCTGCTAA ATCGGGAACCAGCAATGGCAATGGCCGTCCAAGCCGTCCAGCCGCCCGCT CAGGTCCAACCTGCTCTTCCAGAGGCTGTGGCGCCGGCAGCTGCTATCCC GATGGCTGACGACAACAACGAATGAGACGTGGAAGCGGCTGCTTGATTGG CGCTTGTCGGGCGCGTTTCATCGTTTACATTTCACAGGTATAGCTTAATC TTCGACTACCAGTTTATATTCCTGCAGTTCGTGGTGTGCGCCCTCATCTA CGTCTGGGTGACGCGACTCACCCGCGGTCCAGCCACTGGGCCGTGATGAA CTGCCAGCAGGCATTTACCCAATCAATTAATCTCCATTATATGTGCTCGA TGTGTTTGCAAATGCAATGTGTATCCCGTAAACCCATTTTTTGTGCTCCT CCAAACTTGGATCGTACAGTTAGTAATTTAAAAAAAAAACGTCTGTCTTT GTTCTAGTTAAAGTTATGAAAATTAGTTAAAACCATGTAAACCAGAGTAT AAGACTTCTGCAACCGATCATCTATAATTAGCACAACTCTCCTAAAGGGT GCTCCATCAGGACAGATACGAAATCGTTCGGCTTGGATAAGATTGGTTGC CTTAAGCAAAGAAAGTTCATTAAACAGCCAATCAGTTGATTGTCAACCTT GAAGATGATTACTTGTGATTAAAATCGATAGAGCGACTGCTTCAAATTCG AATCTGTCCTGTTGCATGCAATGCCACACATGAATATAATGATACGCCTT GTTGCAACCAGTAAACAGCTATACATATTCAATATAAATAAAGATAATTA TACACAAAGAGATATCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9467-RA | 3264 | CG9467-RA | 40..3209 | 1..3170 | 15850 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5626505..5626848 | 1..344 | 100 | Minus | |
chr3R | 5623605..5626426 | 345..3166 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 1..2193 | 283..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 1..2193 | 283..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 1..2193 | 283..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 1..2193 | 283..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 1..2193 | 283..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 40..3200 | 1..3161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 40..3205 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 15..3180 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 40..3200 | 1..3161 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9467-RA | 15..3180 | 1..3166 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9797769..9800590 | 345..3166 | 100 | <- | Minus |
3R | 9800669..9801012 | 1..344 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9797769..9800590 | 345..3166 | 100 | <- | Minus |
3R | 9800669..9801012 | 1..344 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9797769..9800590 | 345..3166 | 100 | <- | Minus |
3R | 9800669..9801012 | 1..344 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5623491..5626312 | 345..3166 | 100 | <- | Minus |
arm_3R | 5626391..5626734 | 1..344 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9538600..9541421 | 345..3166 | 100 | <- | Minus |
3R | 9541500..9541843 | 1..344 | 100 | Minus |
Translation from 282 to 2474
> LD44003.pep MSHFTHASSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRD EHNAIFIDRDPTLFSIILNYLRTKDIDIKNCEIRALRHEAEYYGITPLTK RLALCEDLNHSSCGDLLFYGFLAAPPMPSNEAVAATSVDESLPSTSASAI GSRPGSMVRVPEPSRSSHSRNSSWDLRLGRTGSTGNGANPPAPMLHSRNP SIDFMRHSRNSSADLNKVFRNEVGLVFSPTQNSNWVDPLRVQIIKAHQNW IAVAYAHFVTCYRVKDSNGWQQVFTSPHIDATIERIAINSKVNTSAAEPL PSKMVAISYGSQIRLWSIQEGGQKTDVGTFNLNVRVEYLFFIGSQLVALS SSGKIGVWHAMTQHWQIQDLVPVLSFDSAGSFLLLGCNNGSIYYIDMQKF PLRIKDNDLLVTELYKDVTLDPITAISVYLTPKTSSISGNWIEIAYGTKS GAVRIIVQHPETAGHGPHLFETFFVHQSPVTKVMLSEKYLVSVCSEYHHV RTWRLTRFRGMLSTQPGSTPEASFKIVSLEATDTSYSYAAGNDFGPYGDY DDMIFVQKVVPETDQLYVRLASNGDRVCVIRSVDSSTISAFCVLECEVSS RFILTGHCNGAIQMWDLTTALALLSKDEPQQKINGGPDTNELLRLLDQCE ISNSSCTTPCMSPCLSAMGNGSGMASSIARMKASNIALLNREPAMAMAVQ AVQPPAQVQPALPEAVAPAAAIPMADDNNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17150-PA | 739 | GF17150-PA | 1..711 | 1..713 | 3518 | 92.7 | Plus |
Dana\GF21506-PA | 297 | GF21506-PA | 13..104 | 9..98 | 167 | 45.7 | Plus |
Dana\GF20912-PA | 266 | GF20912-PA | 80..174 | 13..105 | 162 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17322-PA | 727 | GG17322-PA | 1..727 | 1..730 | 3789 | 96.8 | Plus |
Dere\GG10865-PA | 301 | GG10865-PA | 17..108 | 9..98 | 161 | 44.6 | Plus |
Dere\GG12864-PA | 208 | GG12864-PA | 24..118 | 13..105 | 159 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14231-PA | 810 | GH14231-PA | 1..736 | 1..699 | 3129 | 82.1 | Plus |
Dgri\GH23729-PA | 297 | GH23729-PA | 13..104 | 9..98 | 164 | 44.6 | Plus |
Dgri\GH20158-PA | 297 | GH20158-PA | 13..104 | 9..98 | 164 | 44.6 | Plus |
Dgri\GH17955-PA | 210 | GH17955-PA | 24..118 | 13..105 | 157 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9467-PA | 730 | CG9467-PA | 1..730 | 1..730 | 3801 | 100 | Plus |
CG10465-PA | 301 | CG10465-PA | 17..108 | 9..98 | 158 | 46.7 | Plus |
inc-PC | 211 | CG32810-PC | 24..118 | 13..105 | 152 | 38.9 | Plus |
inc-PD | 211 | CG32810-PD | 24..118 | 13..105 | 152 | 38.9 | Plus |
inc-PB | 211 | CG32810-PB | 24..118 | 13..105 | 152 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22137-PA | 787 | GI22137-PA | 1..713 | 1..692 | 3202 | 85.1 | Plus |
Dmoj\GI20668-PA | 297 | GI20668-PA | 13..104 | 9..98 | 163 | 44.6 | Plus |
Dmoj\GI16490-PA | 210 | GI16490-PA | 24..118 | 13..105 | 160 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23225-PA | 395 | GL23225-PA | 1..354 | 1..354 | 1686 | 90.2 | Plus |
Dper\GL23226-PA | 359 | GL23226-PA | 1..303 | 397..695 | 1529 | 93.4 | Plus |
Dper\GL11047-PA | 297 | GL11047-PA | 13..104 | 9..98 | 163 | 44.6 | Plus |
Dper\GL14263-PA | 210 | GL14263-PA | 24..121 | 13..110 | 159 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21809-PA | 751 | GA21809-PA | 1..699 | 1..695 | 3465 | 92.2 | Plus |
Dpse\GA17157-PA | 210 | GA17157-PA | 24..121 | 13..110 | 159 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26209-PA | 730 | GM26209-PA | 1..730 | 1..730 | 3913 | 99.3 | Plus |
Dsec\GM11095-PA | 301 | GM11095-PA | 17..108 | 9..98 | 161 | 44.6 | Plus |
Dsec\GM19148-PA | 211 | GM19148-PA | 24..118 | 13..105 | 159 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10363-PA | 301 | GD10363-PA | 17..108 | 9..98 | 161 | 44.6 | Plus |
Dsim\GD24718-PA | 211 | GD24718-PA | 24..118 | 13..105 | 159 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24256-PA | 795 | GJ24256-PA | 1..720 | 1..694 | 3217 | 85.1 | Plus |
Dvir\GJ16035-PA | 210 | GJ16035-PA | 24..118 | 13..105 | 164 | 38.9 | Plus |
Dvir\GJ20417-PA | 297 | GJ20417-PA | 13..104 | 9..98 | 164 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14512-PA | 756 | GK14512-PA | 1..702 | 1..695 | 3379 | 89.6 | Plus |
Dwil\GK14663-PA | 210 | GK14663-PA | 24..118 | 13..105 | 161 | 38.9 | Plus |
Dwil\GK21368-PA | 388 | GK21368-PA | 104..198 | 9..105 | 161 | 42.4 | Plus |
Translation from 282 to 2474
> LD44003.hyp MSHFTHASSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRD EHNAIFIDRDPTLFSIILNYLRTKDIDIKNCEIRALRHEAEYYGITPLTK RLALCEDLNHSSCGDLLFYGFLAAPPMPSNEAVAATSVDESLPSTSASAI GSRPGSMVRVPEPSRSSHSRNSSWDLRLGRTGSTGNGANPPAPMLHSRNP SIDFMRHSRNSSADLNKVFRNEVGLVFSPTQNSNWVDPLRVQIIKAHQNW IAVAYAHFVTCYRVKDSNGWQQVFTSPHIDATIERIAINSKVNTSAAEPL PSKMVAISYGSQIRLWSIQEGGQKTDVGTFNLNVRVEYLFFIGSQLVALS SSGKIGVWHAMTQHWQIQDLVPVLSFDSAGSFLLLGCNNGSIYYIDMQKF PLRIKDNDLLVTELYKDVTLDPITAISVYLTPKTSSISGNWIEIAYGTKS GAVRIIVQHPETAGHGPHLFETFFVHQSPVTKVMLSEKYLVSVCSEYHHV RTWRLTRFRGMLSTQPGSTPEASFKIVSLEATDTSYSYAAGNDFGPYGDY DDMIFVQKVVPETDQLYVRLASNGDRVCVIRSVDSSTISAFCVLECEVSS RFILTGHCNGAIQMWDLTTALALLSKDEPQQKINGGPDTNELLRLLDQCE ISNSSCTTPCMSPCLSAMGNGSGMASSIARMKASNIALLNREPAMAMAVQ AVQPPAQVQPALPEAVAPAAAIPMADDNNE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9467-PA | 730 | CG9467-PA | 1..730 | 1..730 | 3801 | 100 | Plus |
CG10465-PA | 301 | CG10465-PA | 17..108 | 9..98 | 158 | 46.7 | Plus |
inc-PC | 211 | CG32810-PC | 24..118 | 13..105 | 152 | 38.9 | Plus |
inc-PD | 211 | CG32810-PD | 24..118 | 13..105 | 152 | 38.9 | Plus |
inc-PB | 211 | CG32810-PB | 24..118 | 13..105 | 152 | 38.9 | Plus |