Clone LD44094 Report

Search the DGRC for LD44094

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:440
Well:94
Vector:pOT2
Associated Gene/TranscriptCG11248-RA
Protein status:LD44094.pep: gold
Preliminary Size:2907
Sequenced Size:2954

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11248 2001-01-01 Release 2 assignment
CG11248 2002-05-25 Blastp of sequenced clone
CG11248 2003-01-01 Sim4 clustering to Release 3
CG11248 2008-04-29 Release 5.5 accounting
CG11248 2008-08-15 Release 5.9 accounting
CG11248 2008-12-18 5.12 accounting

Clone Sequence Records

LD44094.complete Sequence

2954 bp (2954 high quality bases) assembled on 2002-05-25

GenBank Submission: AY118582

> LD44094.complete
ATTTCGCTTAAAATGTAGTTTTATCGTTAATTAGGAAAAGTTACCCACGG
TAAAAAAAAACAACCGTCAACAATTGTTCAGAAACATCAACTAGTACGAC
TCAGTGGACACCTCCGTGTGCTCGGTTATGGATTTGGACTGCGAGGGCGC
TACAGCTTTGGCTGACGACTCAGGGCACTTTAGCTGCACTAGCGATGATG
GAGTAGGAGATCCTGCTCAGAAACCGGCGCCGCAGCCTGAACCGGACCAA
TCGATTTTTCTGGTGCGGCAAGAGCTGCTTCGGACGCGCAGTGAGGTGCA
AAGGCTCTTAAAATCGGAGCAGTGGTACAAGCAGGAGCTTAAGTCCCAGA
AGCACAGCAGGCTACAGACGCTAGAACGATTGTACGCACAGGAACGGAAG
TATTTGATGGAGAACCAGAAGCTGCAGCAAGAATCGATCCGCCTGCACAC
ACAATGCGCCACTCTGGAGAAGCAGCAGGAGCAGGGCTCACCATTTTCCC
CTGGCTCATCGCCGTTTAAAGCAGACTCGGAGTCACACGACTCCTCTTTT
GAGGCCAAACAGCAGGAGGCGCGCCTACGGGATCAGCGTCAGTTGATCGA
CGTGCTCCGAAGGCAAAAGAAGATGCTTCTGGACGACATCCAGAGGATCA
GTCTGGAACACGATGAAAAACTTTCGCAGTTGCAGCAAACTGTTGTCGGC
ATGGAGCTGGAGAGCAAGCACGTGACTGGAAAATGCAAGCAACTACTTGA
CCTTAAAAGTCAAATGGAGCACCAGCTAGAGCTAAGAAGCACTACCCTAC
GCAGTGTCACCGCGGAGCGTGATCAGCTGCGCCAAGTCATTGCTGAGCTT
AACGAGACGCTGCAAACGCAGGAGCATCTGTTAGCGCTAAAGGAACAGGA
GTTCCTGGATTTGAAACAGTACTACCAACAAAAGCTGAAACGGGAGAGTA
GCATGGAAATTATGCACTCTTATAGCATGAAATTTCACGAAGAGATCAAC
AGAAAAACGAGTGAAATTGCCAGCCTTAAGAATTCTCTTAACGAGCTTCA
GGCCGAGCTGATGCTGATGTCTCACATGAAAGAGCAATGCGAGGAACAGC
AGCGTCAGCTTGAGCAACTGGAGTTCGCATTGCAGGCACAACTTTTGGAG
GAGACTCAACTTCGGCAAAGCAATGCTCTAAAACTGGAGCAGGTGGAAAA
TTTAACAATTTCTTTGGCTTCGTTACAACTAGATAAGGAAGGCTTAAAAG
AAAATTTAGGTGAGGCGCAAAAGACCTTGAAAAATCTACAGCAGAAGGTG
GACATTCTTCAAAAACAGTATGCCGAAATGTGCTCCTTGTGTCAAAAGAC
TAAACAGCAATTGGAACTGGAGAAAATCGAGATTGCCAAAATGAAGCAAA
ACGGTTCCTTAAAGGAAAGTGAGCTAATGGAGAAACTCAAAGATTATGCA
GCGCAGTGTGATGAGCTGAGAAAAGCGTTGGCCGAAGCAGAGTCCCGTAT
CGATGTCCAAATCAAAAAGACAGAGGGCTGGCAAGTGCAGTTGAAACACA
ACCAAGCGACCCAAACGGACCTCGAAGATCCGATTTTAGTTCAACGCATT
GAGACTTTGGAACAACAACTAGCGGATGTCAGGAGCCAAAAATTGCACAC
AGTTTCGCTGCTCCAAATACTGCTTCAACAGCAAGAAGCTAAAATCAAGA
GCACTAACGAAATGGAAGCAGACTGGCAACAACTGTTAGATGCTCTGCAA
GCTACTCAAAGCTTGGAGCAGGAAATGCGATCAGAACTACAGCATAAGAC
GGTTGAATTGGAGCACCTGAATGAATTGTTCGCTGGACAAAATGATGAAC
TGCAAAAGCTCCAGAAATTGAGCCAAGCGCAGGACGAGGAAAATCGACTA
GAGTTACAGCTTTTGAAGAAAACATTCCAAGAGAATCTGAAGATAAACTC
CGCTGCGTCGATTAACATGCAAAGGCTGCAAGGCCAGGTAAAGTCTTTGC
TAGATGAGAAGGAGGAAATTGCGCGAGAAGAACGCAAAGCAGTAGAGTGT
TTGCGATCTCTTGGTCACGTTCTTGAGATGGAAACAGGAAGGAGGCTACC
ACATATAAAAAGCTGGCCTCAGTTGGCCAAAATTCTTCGAAAGGAACTGC
GAAATGGGAGGGTTAACAATCGAAAGGCTGAAGAGCTTCCTGGGCTTAAA
ATGAAGCTGGCGGAGATCAGCGGAAGGCATCAGCAAGCTTTGTCAAAAAT
TAAGTGTCTGGAGCACACTTTGGTAATGGAGCGAGCGCGGTTTGAGGCCT
CGGACTCGGGCAAATCGACGGCTAGCAACACGCCCCAGGAACCCGCCCAT
GAAGTGGCTAATCTTATTGATGACTACAAGAAGCTCGTTCAGCAAACCGC
CAATGAAACATGTCGCCCTCGCAACAGCTTCATATTCGATCTGATTGAGC
GGAGTCAGCGATGCCAACCGAATTTGTGCCAATTAGGCGAGGGTATTTCC
GCCTGCCAGTCTGATATGAAGGAGCTAAGCAGGATTATTATTGCTGGTCG
GGAACGGAGGAGAGTGGAGCCCATGCCCTCCCTCATGGATGAACTTCGAG
CGGTGGCCGAGCACTCTTAGACGAGCATAATTTAGTTTTCAGTCAAATAC
TTATAAATTTCCTATTTAGTACCTATTTGTTTAGTCTCAAATTTTGTTTT
CCTAAAAGGGGCAATTAGTGAATTGAGTTTTTGTGCCTAGTCTCATAGGC
CTAATTTTCAATCAGATCCAACTTAGTTCAATTTATATAAATATTTATTT
TGTTGTCTTTTGTGTTCGTTATCTTTATTTATGTGTAACGCATTCTGTTA
GTTTCACCAATTCTATATACATACTAATTGCCAAACTATACCAATATTTT
TTTCTACAAGATATATAAACCATTGTTGGTTGCCACAAAAAAAAAAAAAA
AAAA

LD44094.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG11248-RA 2998 CG11248-RA 57..2996 1..2941 14665 99.9 Plus
CG11248.a 3013 CG11248.a 190..3011 119..2941 14075 99.9 Plus
CG11248-RB 2927 CG11248-RB 105..2925 120..2941 14070 99.9 Plus
CG11248.a 3013 CG11248.a 63..182 1..120 600 100 Plus
CG11248-RB 2927 CG11248-RB 57..105 1..49 245 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:07:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 21669235..21671369 120..2254 10675 100 Plus
chr3L 24539361 chr3L 21671614..21672167 2382..2936 2725 99.8 Plus
chr3L 24539361 chr3L 21671429..21671559 2253..2383 655 100 Plus
chr3L 24539361 chr3L 21669040..21669159 1..120 600 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:39:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21680299..21682433 120..2254 10675 100 Plus
3L 28110227 3L 21682678..21683236 2382..2941 2750 99.8 Plus
3L 28110227 3L 21682493..21682623 2253..2383 655 100 Plus
3L 28110227 3L 21680104..21680223 1..120 600 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 21673399..21675533 120..2254 10675 100 Plus
3L 28103327 3L 21675778..21676336 2382..2941 2760 99.8 Plus
3L 28103327 3L 21675593..21675723 2253..2383 655 100 Plus
3L 28103327 3L 21673204..21673323 1..120 600 100 Plus
Blast to na_te.dros performed 2019-03-16 22:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy11 4428 gypsy11 GYPSY11 4428bp 3819..3967 2927..2782 151 60.3 Minus

LD44094.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:08:48 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 21669040..21669159 1..120 100 -> Plus
chr3L 21669236..21671369 121..2254 100 -> Plus
chr3L 21671431..21671559 2255..2383 100 -> Plus
chr3L 21671616..21672167 2384..2936 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:26:53 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 1..2493 128..2620 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:37:30 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 1..2493 128..2620 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:10:34 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RB 1..2493 128..2620 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:29:08 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 1..2493 128..2620 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:34:20 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RB 1..2493 128..2620 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:10:01 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 1..2935 1..2936 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:37:30 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 1..2935 1..2936 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:10:34 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 55..2989 1..2936 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:29:08 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 1..2935 1..2936 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:34:20 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
CG11248-RA 55..2989 1..2936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:08:48 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21680104..21680223 1..120 100 -> Plus
3L 21680300..21682433 121..2254 100 -> Plus
3L 21682495..21682623 2255..2383 100 -> Plus
3L 21682680..21683231 2384..2936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:08:48 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21680104..21680223 1..120 100 -> Plus
3L 21680300..21682433 121..2254 100 -> Plus
3L 21682495..21682623 2255..2383 100 -> Plus
3L 21682680..21683231 2384..2936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:08:48 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21680104..21680223 1..120 100 -> Plus
3L 21680300..21682433 121..2254 100 -> Plus
3L 21682495..21682623 2255..2383 100 -> Plus
3L 21682680..21683231 2384..2936 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:10:34 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21673204..21673323 1..120 100 -> Plus
arm_3L 21673400..21675533 121..2254 100 -> Plus
arm_3L 21675595..21675723 2255..2383 100 -> Plus
arm_3L 21675780..21676331 2384..2936 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:01:44 Download gff for LD44094.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21673400..21675533 121..2254 100 -> Plus
3L 21675595..21675723 2255..2383 100 -> Plus
3L 21675780..21676331 2384..2936 99   Plus
3L 21673204..21673323 1..120 100 -> Plus

LD44094.pep Sequence

Translation from 127 to 2619

> LD44094.pep
MDLDCEGATALADDSGHFSCTSDDGVGDPAQKPAPQPEPDQSIFLVRQEL
LRTRSEVQRLLKSEQWYKQELKSQKHSRLQTLERLYAQERKYLMENQKLQ
QESIRLHTQCATLEKQQEQGSPFSPGSSPFKADSESHDSSFEAKQQEARL
RDQRQLIDVLRRQKKMLLDDIQRISLEHDEKLSQLQQTVVGMELESKHVT
GKCKQLLDLKSQMEHQLELRSTTLRSVTAERDQLRQVIAELNETLQTQEH
LLALKEQEFLDLKQYYQQKLKRESSMEIMHSYSMKFHEEINRKTSEIASL
KNSLNELQAELMLMSHMKEQCEEQQRQLEQLEFALQAQLLEETQLRQSNA
LKLEQVENLTISLASLQLDKEGLKENLGEAQKTLKNLQQKVDILQKQYAE
MCSLCQKTKQQLELEKIEIAKMKQNGSLKESELMEKLKDYAAQCDELRKA
LAEAESRIDVQIKKTEGWQVQLKHNQATQTDLEDPILVQRIETLEQQLAD
VRSQKLHTVSLLQILLQQQEAKIKSTNEMEADWQQLLDALQATQSLEQEM
RSELQHKTVELEHLNELFAGQNDELQKLQKLSQAQDEENRLELQLLKKTF
QENLKINSAASINMQRLQGQVKSLLDEKEEIAREERKAVECLRSLGHVLE
METGRRLPHIKSWPQLAKILRKELRNGRVNNRKAEELPGLKMKLAEISGR
HQQALSKIKCLEHTLVMERARFEASDSGKSTASNTPQEPAHEVANLIDDY
KKLVQQTANETCRPRNSFIFDLIERSQRCQPNLCQLGEGISACQSDMKEL
SRIIIAGRERRRVEPMPSLMDELRAVAEHS*

LD44094.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25163-PA 837 GF25163-PA 3..837 8..830 2918 71.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:31:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16216-PA 838 GG16216-PA 1..838 1..830 3747 87.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:31:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16369-PA 806 GH16369-PA 1..806 1..830 1813 52.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG11248-PC 830 CG11248-PC 1..830 1..830 4153 100 Plus
CG11248-PA 830 CG11248-PA 1..830 1..830 4153 100 Plus
CG11248-PB 830 CG11248-PB 1..830 1..830 4153 100 Plus
zip-PH 1964 CG15792-PH 960..1775 56..786 306 21.7 Plus
zip-PG 1971 CG15792-PG 952..1767 56..786 306 21.7 Plus
zip-PE 1971 CG15792-PE 952..1767 56..786 306 21.7 Plus
zip-PC 1971 CG15792-PC 952..1767 56..786 306 21.7 Plus
zip-PF 1979 CG15792-PF 960..1775 56..786 306 21.7 Plus
zip-PB 2011 CG15792-PB 992..1807 56..786 306 21.7 Plus
zip-PD 2016 CG15792-PD 997..1812 56..786 306 21.7 Plus
zip-PI 2024 CG15792-PI 1005..1820 56..786 306 21.7 Plus
zip-PA 2056 CG15792-PA 1037..1852 56..786 306 21.7 Plus
CLIP-190-PN 1598 CG5020-PN 602..1316 47..804 256 22 Plus
CLIP-190-PR 1601 CG5020-PR 605..1319 47..804 256 22 Plus
CLIP-190-PP 1623 CG5020-PP 627..1341 47..804 256 22 Plus
CLIP-190-PC 1652 CG5020-PC 656..1370 47..804 256 22 Plus
CLIP-190-PS 1653 CG5020-PS 657..1371 47..804 256 22 Plus
CLIP-190-PM 1668 CG5020-PM 672..1386 47..804 256 22 Plus
CLIP-190-PB 1689 CG5020-PB 693..1407 47..804 256 22 Plus
CLIP-190-PA 1690 CG5020-PA 694..1408 47..804 256 22 Plus
mud-PK 1912 CG12047-PK 1025..1762 40..774 238 21.2 Plus
lva-PD 2779 CG6450-PD 760..1300 73..643 238 22.8 Plus
lva-PD 2779 CG6450-PD 910..1617 32..826 238 20.8 Plus
lva-PC 2779 CG6450-PC 760..1300 73..643 238 22.8 Plus
lva-PC 2779 CG6450-PC 910..1617 32..826 238 20.8 Plus
Rok-PC 1374 CG9774-PC 494..1113 49..613 231 23.3 Plus
Rok-PD 1381 CG9774-PD 485..1104 49..613 231 23.3 Plus
Rok-PB 1381 CG9774-PB 494..1113 49..613 231 23.3 Plus
Rok-PA 1390 CG9774-PA 494..1113 49..613 231 23.3 Plus
mud-PK 1912 CG12047-PK 884..1540 145..768 229 21 Plus
mud-PL 2501 CG12047-PL 884..1498 145..768 229 21.4 Plus
zip-PH 1964 CG15792-PH 850..1510 50..713 226 20.8 Plus
zip-PG 1971 CG15792-PG 842..1502 50..713 226 20.8 Plus
zip-PE 1971 CG15792-PE 842..1502 50..713 226 20.8 Plus
zip-PC 1971 CG15792-PC 842..1502 50..713 226 20.8 Plus
zip-PF 1979 CG15792-PF 850..1510 50..713 226 20.8 Plus
zip-PB 2011 CG15792-PB 882..1542 50..713 226 20.8 Plus
zip-PD 2016 CG15792-PD 887..1547 50..713 226 20.8 Plus
zip-PI 2024 CG15792-PI 895..1555 50..713 226 20.8 Plus
zip-PA 2056 CG15792-PA 927..1587 50..713 226 20.8 Plus
mud-PL 2501 CG12047-PL 1065..1861 52..742 220 20.2 Plus
lva-PD 2779 CG6450-PD 231..791 144..676 219 22.5 Plus
lva-PC 2779 CG6450-PC 231..791 144..676 219 22.5 Plus
GCC185-PB 1135 CG3532-PB 213..849 76..657 219 21.5 Plus
mud-PG 1933 CG12047-PG 884..1575 145..828 219 21 Plus
mud-PI 2113 CG12047-PI 884..1575 145..828 219 21 Plus
mud-PJ 2165 CG12047-PJ 884..1575 145..828 219 21 Plus
mud-PF 2394 CG12047-PF 884..1575 145..828 219 21 Plus
mud-PH 2567 CG12047-PH 884..1575 145..828 219 21 Plus
cmet-PE 2186 CG6392-PE 1456..2047 98..700 218 23.8 Plus
CLIP-190-PR 1601 CG5020-PR 236..826 171..753 214 20.4 Plus
Rok-PC 1374 CG9774-PC 614..1131 47..599 214 22 Plus
Rok-PD 1381 CG9774-PD 605..1122 47..599 214 22 Plus
Rok-PA 1390 CG9774-PA 614..1131 47..599 214 22 Plus
CG18304-PC 1813 CG18304-PC 902..1469 162..723 214 20.4 Plus
CG18304-PB 1819 CG18304-PB 908..1475 162..723 214 20.4 Plus
CG18304-PA 1895 CG18304-PA 984..1551 162..723 214 20.4 Plus
CG18304-PD 1901 CG18304-PD 990..1557 162..723 214 20.4 Plus
CLIP-190-PN 1598 CG5020-PN 674..1413 31..746 213 21.2 Plus
CLIP-190-PR 1601 CG5020-PR 677..1416 31..746 213 21.2 Plus
CLIP-190-PP 1623 CG5020-PP 699..1438 31..746 213 21.2 Plus
CLIP-190-PC 1652 CG5020-PC 728..1467 31..746 213 21.2 Plus
CLIP-190-PS 1653 CG5020-PS 303..878 171..753 213 20.5 Plus
CLIP-190-PS 1653 CG5020-PS 729..1468 31..746 213 21.2 Plus
CLIP-190-PM 1668 CG5020-PM 744..1483 31..746 213 21.2 Plus
CLIP-190-PB 1689 CG5020-PB 765..1504 31..746 213 21.2 Plus
CLIP-190-PA 1690 CG5020-PA 766..1505 31..746 213 21.2 Plus
lva-PD 2779 CG6450-PD 522..1291 22..759 213 20.6 Plus
lva-PD 2779 CG6450-PD 1105..1728 69..703 213 22.3 Plus
lva-PC 2779 CG6450-PC 522..1291 22..759 213 20.6 Plus
lva-PC 2779 CG6450-PC 1105..1728 69..703 213 22.3 Plus
Golgin245-PA 1489 CG3493-PA 541..1173 40..641 213 21.4 Plus
mud-PK 1912 CG12047-PK 1186..1866 46..708 212 19.4 Plus
Rok-PB 1381 CG9774-PB 614..1118 47..587 212 21.6 Plus
Golgin245-PA 1489 CG3493-PA 144..782 81..707 210 21.6 Plus
CLIP-190-PN 1598 CG5020-PN 272..823 210..753 209 20.6 Plus
CLIP-190-PP 1623 CG5020-PP 297..848 210..753 209 20.6 Plus
CLIP-190-PC 1652 CG5020-PC 326..877 210..753 209 20.6 Plus
CLIP-190-PM 1668 CG5020-PM 342..893 210..753 209 20.6 Plus
CLIP-190-PB 1689 CG5020-PB 363..914 210..753 209 20.6 Plus
CLIP-190-PA 1690 CG5020-PA 364..915 210..753 209 20.6 Plus
GCC185-PB 1135 CG3532-PB 10..693 36..724 206 21.5 Plus
zip-PH 1964 CG15792-PH 1106..1873 23..756 205 21 Plus
zip-PG 1971 CG15792-PG 1098..1865 23..756 205 21 Plus
zip-PE 1971 CG15792-PE 1098..1865 23..756 205 21 Plus
zip-PC 1971 CG15792-PC 1098..1865 23..756 205 21 Plus
zip-PF 1979 CG15792-PF 1106..1873 23..756 205 21 Plus
zip-PB 2011 CG15792-PB 1138..1905 23..756 205 21 Plus
zip-PD 2016 CG15792-PD 1143..1910 23..756 205 21 Plus
zip-PI 2024 CG15792-PI 1151..1918 23..756 205 21 Plus
zip-PA 2056 CG15792-PA 1183..1950 23..756 205 21 Plus
sti-PA 1854 CG10522-PA 570..1239 61..733 203 20.7 Plus
sti-PB 1858 CG10522-PB 574..1243 61..733 203 20.7 Plus
mira-PC 805 CG12249-PC 148..752 231..802 202 22.4 Plus
CLIP-190-PN 1598 CG5020-PN 278..1012 48..818 201 20.8 Plus
CLIP-190-PP 1623 CG5020-PP 303..1037 48..818 201 20.8 Plus
CLIP-190-PC 1652 CG5020-PC 332..1066 48..818 201 20.8 Plus
CLIP-190-PM 1668 CG5020-PM 348..1082 48..818 201 20.8 Plus
CLIP-190-PB 1689 CG5020-PB 369..1103 48..818 201 20.8 Plus
CLIP-190-PA 1690 CG5020-PA 370..1104 48..818 201 20.8 Plus
mira-PB 799 CG12249-PB 148..746 231..802 201 22.1 Plus
Gmap-PA 1398 CG33206-PA 125..882 14..643 199 21 Plus
lva-PD 2779 CG6450-PD 1750..2463 7..760 196 20.6 Plus
lva-PC 2779 CG6450-PC 1750..2463 7..760 196 20.6 Plus
Gmap-PA 1398 CG33206-PA 227..894 31..636 196 21.5 Plus
mira-PA 829 CG12249-PA 148..776 231..802 196 22.1 Plus
Gmap-PC 1208 CG33206-PC 37..704 31..636 196 21.5 Plus
Gmap-PB 1208 CG33206-PB 37..704 31..636 196 21.5 Plus
asl-PA 994 CG2919-PA 384..962 46..608 195 20.4 Plus
Root-PF 2048 CG6129-PF 566..1318 49..797 195 21.8 Plus
Root-PE 2048 CG6129-PE 566..1318 49..797 195 21.8 Plus
mud-PK 1912 CG12047-PK 1228..1876 46..666 191 19 Plus
lva-PD 2779 CG6450-PD 58..631 168..738 189 22.5 Plus
lva-PC 2779 CG6450-PC 58..631 168..738 189 22.5 Plus
cmet-PE 2186 CG6392-PE 1000..1619 194..801 189 22 Plus
Gmap-PA 1398 CG33206-PA 328..922 12..640 186 20.2 Plus
Gmap-PC 1208 CG33206-PC 138..732 12..640 186 20.2 Plus
Gmap-PB 1208 CG33206-PB 138..732 12..640 186 20.2 Plus
mira-PA 829 CG12249-PA 19..690 5..643 185 22.1 Plus
CLIP-190-PN 1598 CG5020-PN 962..1505 40..581 184 19.8 Plus
CLIP-190-PR 1601 CG5020-PR 965..1508 40..581 184 19.8 Plus
CLIP-190-PP 1623 CG5020-PP 987..1530 40..581 184 19.8 Plus
CLIP-190-PC 1652 CG5020-PC 1016..1559 40..581 184 19.8 Plus
CLIP-190-PS 1653 CG5020-PS 1017..1560 40..581 184 19.8 Plus
CLIP-190-PM 1668 CG5020-PM 1032..1575 40..581 184 19.8 Plus
CLIP-190-PB 1689 CG5020-PB 1053..1596 40..581 184 19.8 Plus
CLIP-190-PA 1690 CG5020-PA 1054..1597 40..581 184 19.8 Plus
lva-PD 2779 CG6450-PD 1656..2412 47..786 184 20 Plus
lva-PC 2779 CG6450-PC 1656..2412 47..786 184 20 Plus
Gmap-PC 1208 CG33206-PC 6..654 70..728 179 20.8 Plus
Gmap-PB 1208 CG33206-PB 6..654 70..728 179 20.8 Plus
Root-PF 2048 CG6129-PF 1129..1836 47..712 178 20.6 Plus
Root-PE 2048 CG6129-PE 1129..1836 47..712 178 20.6 Plus
lva-PD 2779 CG6450-PD 1881..2536 21..609 177 20.5 Plus
lva-PC 2779 CG6450-PC 1881..2536 21..609 177 20.5 Plus
lva-PD 2779 CG6450-PD 2105..2541 97..578 173 21.9 Plus
lva-PC 2779 CG6450-PC 2105..2541 97..578 173 21.9 Plus
asl-PA 994 CG2919-PA 129..825 46..729 172 19 Plus
Root-PF 2048 CG6129-PF 980..1718 48..813 171 18.2 Plus
Root-PE 2048 CG6129-PE 980..1718 48..813 171 18.2 Plus
CG18304-PA 1895 CG18304-PA 731..1473 120..758 169 20.3 Plus
CG18304-PD 1901 CG18304-PD 737..1479 120..758 169 20.3 Plus
cmet-PE 2186 CG6392-PE 701..1431 46..759 168 18.8 Plus
GCC185-PB 1135 CG3532-PB 449..1055 49..630 167 20.5 Plus
GCC185-PB 1135 CG3532-PB 22..579 288..800 164 21 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:31:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11560-PA 802 GI11560-PA 1..802 1..830 1753 52.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:31:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24855-PA 624 GL24855-PA 25..624 229..830 1869 66.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10864-PA 854 GA10864-PA 1..854 1..830 2718 67.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22398-PA 840 GM22398-PA 1..840 1..830 3923 91.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11240-PA 791 GJ11240-PA 1..789 1..828 1912 55.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17057-PA 804 GK17057-PA 1..804 1..830 2307 58.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23030-PA 832 GE23030-PA 1..832 1..830 3749 87.8 Plus
Dyak\GE19785-PA 777 GE19785-PA 1..777 1..830 3434 82.4 Plus

LD44094.hyp Sequence

Translation from 127 to 2619

> LD44094.hyp
MDLDCEGATALADDSGHFSCTSDDGVGDPAQKPAPQPEPDQSIFLVRQEL
LRTRSEVQRLLKSEQWYKQELKSQKHSRLQTLERLYAQERKYLMENQKLQ
QESIRLHTQCATLEKQQEQGSPFSPGSSPFKADSESHDSSFEAKQQEARL
RDQRQLIDVLRRQKKMLLDDIQRISLEHDEKLSQLQQTVVGMELESKHVT
GKCKQLLDLKSQMEHQLELRSTTLRSVTAERDQLRQVIAELNETLQTQEH
LLALKEQEFLDLKQYYQQKLKRESSMEIMHSYSMKFHEEINRKTSEIASL
KNSLNELQAELMLMSHMKEQCEEQQRQLEQLEFALQAQLLEETQLRQSNA
LKLEQVENLTISLASLQLDKEGLKENLGEAQKTLKNLQQKVDILQKQYAE
MCSLCQKTKQQLELEKIEIAKMKQNGSLKESELMEKLKDYAAQCDELRKA
LAEAESRIDVQIKKTEGWQVQLKHNQATQTDLEDPILVQRIETLEQQLAD
VRSQKLHTVSLLQILLQQQEAKIKSTNEMEADWQQLLDALQATQSLEQEM
RSELQHKTVELEHLNELFAGQNDELQKLQKLSQAQDEENRLELQLLKKTF
QENLKINSAASINMQRLQGQVKSLLDEKEEIAREERKAVECLRSLGHVLE
METGRRLPHIKSWPQLAKILRKELRNGRVNNRKAEELPGLKMKLAEISGR
HQQALSKIKCLEHTLVMERARFEASDSGKSTASNTPQEPAHEVANLIDDY
KKLVQQTANETCRPRNSFIFDLIERSQRCQPNLCQLGEGISACQSDMKEL
SRIIIAGRERRRVEPMPSLMDELRAVAEHS*

LD44094.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:20:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG11248-PC 830 CG11248-PC 1..830 1..830 4153 100 Plus
CG11248-PA 830 CG11248-PA 1..830 1..830 4153 100 Plus
CG11248-PB 830 CG11248-PB 1..830 1..830 4153 100 Plus
zip-PH 1964 CG15792-PH 960..1775 56..786 306 21.7 Plus
zip-PG 1971 CG15792-PG 952..1767 56..786 306 21.7 Plus
zip-PH 1964 CG15792-PH 850..1510 50..713 226 20.8 Plus
zip-PH 1964 CG15792-PH 1106..1873 23..756 205 21 Plus