BDGP Sequence Production Resources |
Search the DGRC for LD44124
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 441 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | Arfip-RA |
Protein status: | LD44124.pep: gold |
Preliminary Size: | 2167 |
Sequenced Size: | 1999 |
Gene | Date | Evidence |
---|---|---|
CG17184 | 2001-01-01 | Release 2 assignment |
CG17184 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17184 | 2003-02-24 | Blastp of sequenced clone |
CG17184 | 2008-04-29 | Release 5.5 accounting |
CG17184 | 2008-08-15 | Release 5.9 accounting |
CG17184 | 2008-12-18 | 5.12 accounting |
1999 bp (1999 high quality bases) assembled on 2003-02-24
GenBank Submission: BT004867
> LD44124.complete TTTGATGAACTTTATGCGGAATTTTAGGGATTTGAGAATTTTGACGAGTC CAGGCAGGGGTTACTAAAGTCTCGACTCGCCCAGCGTGCGCCATCGATTT CGGCGTGGAAATCGAAGTGAAACCTCCAGCGCCGTTGCCCGAGAAACACA CACACAGACACCTAATCGGGCACACCCCCACACAAAACGGGCAGACAGGA GGATTTTCCGCTGGCAATTACTCGGTGAGACGGGCGGTTAACTTAACGAC GGCCATAGCTATGACGGACCGCGAGCGCAGCATTCACGAAATGCTGAAGG ATGCGCCCTCGCTGAACGACAGCTGCGGAGCGGTGCACACGGGCACCGAA GGCGGCAGCGGGATCCTTGGAAGCGCCAGCAGCCACAGCATCGCCGGCGG AGGAGGTGGTGGCGGCAACGTTGGAGTTGGTGTCGGCGGCCCCTTTGGCG CCCCCAGCAGCCTGCCACTAAGAAACCATTCAGCACCCACCACACCCATG TCGCCCAGTAGTCCACCATCCGGTAACGGCATCCTGAGCCCCACGGACAG CGGGAGCGGCAGCATTATACGCACTAGCGCCTCCAAGATCGACAGTCTCA AGAACTGGAGTATATCGACGTACAAGTGTACGCGACAGATAATGCTGGAG AAGTTGGGCAAGTCGCAGCGGACCGTGGACTCGGAACTGGAGGCCCAGAT AGAGCAGTTGCGCGAGACGCAGCGCAAGTATCTGTCCATCTTGAGGCTAA CGCGGGCCTTTAGTTCGCACTTCCAGCACGTGGTCGTCACACAGCACGCC CTGGCCGACTCCTTCGCCGATCTGGCCCAGAAGAACCCCGAGCTGCAGAA AGAGTTCACGTGCAATTCGGAGACGCAGCGCAATCTCACCAAGAACGGCG AGCTGCTGCTTAATGCGCTCAACTTCTTTATTTCGTCGGTGAACACACTG TGCAACAAGACGATCGACGATACGCTGCTGACGATACGACAGTACGAAAC GGCCAGAATCGAATTCGATGCCTACCGCATGGATTTGGAGAACACCAAGC CGGAGCTGACGCCCTCGGCCGTCGCTCTTGAGGAGACCCAGCGCAGCTAT GCGCAGCACAAGGAGCAATATGAGAAGCTGCGCTCGGACGTGGCCGTCAA AATGCAATTTCTCGACGAGAATCGCATTAAAGTGATGCACAAGCAATTGA TTCTGCTGCACAATGCCATCGCTGCCTACTTCTCGGGCAATGCCATGGCA CTGGAGAGCACTCTGAAGCAGTTCAACATAAAGCTTAAGTCACCCAATGC CGTCACTGGATCCTGGCTGGAGCAGTAGATCGAGTAGACGCAGTTCGTCC CTTTCACTCGCGAAGCACTTAGGCGCGTATATTGGAGGAGATCGGGACAC GTCGTCCACCTCCACTCATTTGCTGAACGAGCACGCTCTCTAAAAGAAAA AGGAAAAGATCGGTGGCAGAGATGATTCAGTATGCGATGCAGTGGACAGA AACACTGCATGGCGAACCATAACAATATTTTCGTGCTAAGTTTAAGTCGA ATTCCTAAGCCGTAAGCAGAAAGTGAGAGTGGTAGGTGTATGTTATTTAT ATATTTTTCCAACCGCTTTCCATTGTATGTAACTCGCTGTACTACTCACA TTTCCACAGCTGGTACGCTGACGTTCCTTTAACTTGTTTGTGTTTCCAAA TTTTCGTTCGATTATCATCATATTGTTGTCCTCCGCGCTTGTAAAACATA TATAACAAAGTGTACTCGGTGCAATATGAGTGTTTTAGTTTTAGATATTC TAGAATGTGTGTATAAATCCTTTGTAATTCACCCAAAACGAATAATCCAT AACGAATCGAAACTGTTTTTGCGAGCTTGCATAATTTGAAATCATTGTTT TACTAGTCATCGTATTATTTACACTAAAATGAAGTCTATATATATATAAA AATATATAAATAAAAACTATTTAATTACACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17184-RA | 2084 | CG17184-RA | 104..2084 | 1..1981 | 9905 | 100 | Plus |
CG17184-RB | 2176 | CG17184-RB | 196..2176 | 1..1981 | 9905 | 100 | Plus |
CG14701-RA | 517 | CG14701-RA | 395..517 | 1984..1862 | 615 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7058012..7058711 | 1981..1282 | 3380 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 7059499..7060024 | 1006..481 | 2615 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 7060085..7060567 | 483..1 | 2415 | 100 | Minus |
chr3R | 27901430 | chr3R | 7058985..7059155 | 1175..1005 | 855 | 100 | Minus |
chr3R | 27901430 | chr3R | 7058800..7058907 | 1283..1176 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11232426..11233128 | 1984..1282 | 3515 | 100 | Minus |
3R | 32079331 | 3R | 11233922..11234447 | 1006..481 | 2630 | 100 | Minus |
3R | 32079331 | 3R | 11234508..11234990 | 483..1 | 2415 | 100 | Minus |
3R | 32079331 | 3R | 11233402..11233572 | 1175..1005 | 855 | 100 | Minus |
3R | 32079331 | 3R | 11233217..11233324 | 1283..1176 | 540 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 10973257..10973959 | 1984..1282 | 3515 | 100 | Minus |
3R | 31820162 | 3R | 10974753..10975278 | 1006..481 | 2630 | 100 | Minus |
3R | 31820162 | 3R | 10975339..10975821 | 483..1 | 2415 | 100 | Minus |
3R | 31820162 | 3R | 10974233..10974403 | 1175..1005 | 855 | 100 | Minus |
3R | 31820162 | 3R | 10974048..10974155 | 1283..1176 | 540 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7058800..7058907 | 1176..1283 | 100 | <- | Minus |
chr3R | 7058985..7059153 | 1007..1175 | 100 | <- | Minus |
chr3R | 7058060..7058709 | 1284..1933 | 98 | <- | Minus |
chr3R | 7059499..7060021 | 484..1006 | 99 | <- | Minus |
chr3R | 7060085..7060127 | 441..483 | 100 | == | Minus |
chr3R | 7060227..7060567 | 1..341 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17184-RA | 1..1068 | 261..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17184-RA | 1..1068 | 261..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arfip-RA | 1..1068 | 261..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17184-RA | 1..1068 | 261..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arfip-RA | 1..1068 | 261..1328 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17184-RA | 39..2019 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17184-RA | 54..2034 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arfip-RA | 24..2004 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17184-RA | 39..2019 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arfip-RA | 24..2004 | 1..1981 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11232429..11233126 | 1284..1981 | 100 | <- | Minus |
3R | 11233217..11233324 | 1176..1283 | 100 | <- | Minus |
3R | 11233402..11233570 | 1007..1175 | 100 | <- | Minus |
3R | 11233922..11234444 | 484..1006 | 100 | <- | Minus |
3R | 11234508..11234990 | 1..483 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11232429..11233126 | 1284..1981 | 100 | <- | Minus |
3R | 11233217..11233324 | 1176..1283 | 100 | <- | Minus |
3R | 11233402..11233570 | 1007..1175 | 100 | <- | Minus |
3R | 11233922..11234444 | 484..1006 | 100 | <- | Minus |
3R | 11234508..11234990 | 1..483 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11232429..11233126 | 1284..1981 | 100 | <- | Minus |
3R | 11233217..11233324 | 1176..1283 | 100 | <- | Minus |
3R | 11233402..11233570 | 1007..1175 | 100 | <- | Minus |
3R | 11233922..11234444 | 484..1006 | 100 | <- | Minus |
3R | 11234508..11234990 | 1..483 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7058151..7058848 | 1284..1981 | 100 | <- | Minus |
arm_3R | 7058939..7059046 | 1176..1283 | 100 | <- | Minus |
arm_3R | 7059124..7059292 | 1007..1175 | 100 | <- | Minus |
arm_3R | 7059644..7060166 | 484..1006 | 100 | <- | Minus |
arm_3R | 7060230..7060712 | 1..483 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10973260..10973957 | 1284..1981 | 100 | <- | Minus |
3R | 10974048..10974155 | 1176..1283 | 100 | <- | Minus |
3R | 10974233..10974401 | 1007..1175 | 100 | <- | Minus |
3R | 10974753..10975275 | 484..1006 | 100 | <- | Minus |
3R | 10975339..10975821 | 1..483 | 100 | Minus |
Translation from 260 to 1327
> LD44124.hyp MTDRERSIHEMLKDAPSLNDSCGAVHTGTEGGSGILGSASSHSIAGGGGG GGNVGVGVGGPFGAPSSLPLRNHSAPTTPMSPSSPPSGNGILSPTDSGSG SIIRTSASKIDSLKNWSISTYKCTRQIMLEKLGKSQRTVDSELEAQIEQL RETQRKYLSILRLTRAFSSHFQHVVVTQHALADSFADLAQKNPELQKEFT CNSETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYETARI EFDAYRMDLENTKPELTPSAVALEETQRSYAQHKEQYEKLRSDVAVKMQF LDENRIKVMHKQLILLHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTG SWLEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Arfip-PA | 355 | CG17184-PA | 1..355 | 1..355 | 1809 | 100 | Plus |
Translation from 260 to 1327
> LD44124.pep MTDRERSIHEMLKDAPSLNDSCGAVHTGTEGGSGILGSASSHSIAGGGGG GGNVGVGVGGPFGAPSSLPLRNHSAPTTPMSPSSPPSGNGILSPTDSGSG SIIRTSASKIDSLKNWSISTYKCTRQIMLEKLGKSQRTVDSELEAQIEQL RETQRKYLSILRLTRAFSSHFQHVVVTQHALADSFADLAQKNPELQKEFT CNSETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYETARI EFDAYRMDLENTKPELTPSAVALEETQRSYAQHKEQYEKLRSDVAVKMQF LDENRIKVMHKQLILLHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTG SWLEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18250-PA | 350 | GF18250-PA | 1..350 | 1..355 | 1617 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17231-PA | 354 | GG17231-PA | 1..354 | 1..355 | 1843 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17348-PA | 356 | GH17348-PA | 1..356 | 1..355 | 1511 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Arfip-PA | 355 | CG17184-PA | 1..355 | 1..355 | 1809 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23886-PA | 351 | GI23886-PA | 1..351 | 1..355 | 1545 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12025-PA | 362 | GL12025-PA | 1..362 | 1..355 | 1650 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14372-PA | 362 | GA14372-PA | 1..362 | 1..355 | 1650 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26111-PA | 355 | GM26111-PA | 1..355 | 1..355 | 1869 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18741-PA | 357 | GD18741-PA | 1..357 | 1..355 | 1864 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23979-PA | 346 | GJ23979-PA | 1..346 | 1..355 | 1590 | 84.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11946-PA | 354 | GK11946-PA | 1..354 | 1..355 | 1533 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24633-PA | 354 | GE24633-PA | 1..354 | 1..355 | 1844 | 97.5 | Plus |