BDGP Sequence Production Resources |
Search the DGRC for LD44187
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 441 |
Well: | 87 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3995-RA |
Protein status: | LD44187.pep: gold |
Preliminary Size: | 1293 |
Sequenced Size: | 1202 |
Gene | Date | Evidence |
---|---|---|
CG3995 | 2001-01-01 | Release 2 assignment |
CG3995 | 2002-06-13 | Blastp of sequenced clone |
CG3995 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3995 | 2008-04-29 | Release 5.5 accounting |
CG3995 | 2008-08-15 | Release 5.9 accounting |
CG3995 | 2008-12-18 | 5.12 accounting |
1202 bp (1202 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122189
> LD44187.complete GAACTACGAGCCTGTTTCCTTTTCCAAAACAACTTAGTCGAAATGAAGCG GAAAACGAGCGAGATCTGGTGCTTTTTCCGGGCGGTGGACGACACGTTTG CGGTGTGTAATATCTGCAAGGCGAAGCTCTCTTACAAGACGACCACCACG AATCTAAGCAAGCACATGAACAGGATGCACCCCACATCGGGACTCAACCG GAACTCCAAGTACAAATTCCAGCCGCAGACCACCATCGCCATCGACCGGA ACAAAGCCAAGCCGCGCAACTCAACGCAAGAGCTGATATTGTTAGAATTC GTGAAGAAACATCCGCGTCTGCTTCAGAATCCGACGTGGGAAACACGGGG CAATCTGGAGTCGCTGTGGGAGGAACTGTCATCCGAACTTAATAGCCACG GTCCGCCGCGAAAAGATATAGCCACCTGGAGAAGGGCCTTAAAGGACTGG AAGAGGTTTATCCTGAGAAAGGTGGAAAAGAATGAGATGCAGAACATGCC TTTTGGCACCAGTCTTACTTCGTCGGAGGAAACAATAGCCACACTGTGTA GATTAAACGAGGATGTAAGTCAGATTATTATGAAGGTCTCCGACGATGAA ATGCATGAGAATTCCACCACGGAATTTGATGTGGACGAAGTAGAGGATGT GGTCCCGGAAGAAGATGGTGGCGCCCTTCAGACTTCCGCCGAGTACGTTT ACGAACCGGAGGAGAACAAAACGGACATTGACCCGCTTTACCTGCAATCT AACAAACGGGCCGCATTGGCCAGCAGTCGACTGGCGGAGGAGGAGACCAC ACTGCTTGACAAGATTAGCAATAACCTAGAAATGGTGCACGATACCGCCA ACAGCGTTCAACTTGCACTCAATGAATTTTTTGTCCTGTACAAGCAGAAG CTGTACGAGGACAAGCGACATCACTTGGCAATTGAACAGTTAATGGCTGA GAAAATAGAACTGAAAAAGAAACTATTGGAAATCGAGCAAAAAAAGCTGT CGCTCAAATAACGGGATATGCACAAAATTAAGTAATATCTTGGTAGTCTT AATAACCTAATCTTTAAATAATCTAAGTTATTCAATATTTTGATTAATTT TATCACATTTCTTTTAGCTTGGCCCAAGCCCACTTAATATACAAATTTAA TTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 3635..3676 | 954..995 | 111 | 73.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12866391..12867085 | 436..1130 | 100 | <- | Minus |
chr3R | 12867142..12867576 | 1..435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..969 | 43..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..969 | 43..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..969 | 43..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..969 | 43..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..969 | 43..1011 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..1153 | 1..1154 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..1153 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 33..1185 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 1..1153 | 1..1154 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3995-RA | 33..1185 | 1..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17041895..17042613 | 436..1154 | 99 | <- | Minus |
3R | 17042670..17043104 | 1..435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17041895..17042613 | 436..1154 | 99 | <- | Minus |
3R | 17042670..17043104 | 1..435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17041895..17042613 | 436..1154 | 99 | <- | Minus |
3R | 17042670..17043104 | 1..435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12867617..12868335 | 436..1154 | 99 | <- | Minus |
arm_3R | 12868392..12868826 | 1..435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16782726..16783444 | 436..1154 | 99 | <- | Minus |
3R | 16783501..16783935 | 1..435 | 100 | Minus |
Translation from 0 to 1010
> LD44187.hyp ELRACFLFQNNLVEMKRKTSEIWCFFRAVDDTFAVCNICKAKLSYKTTTT NLSKHMNRMHPTSGLNRNSKYKFQPQTTIAIDRNKAKPRNSTQELILLEF VKKHPRLLQNPTWETRGNLESLWEELSSELNSHGPPRKDIATWRRALKDW KRFILRKVEKNEMQNMPFGTSLTSSEETIATLCRLNEDVSQIIMKVSDDE MHENSTTEFDVDEVEDVVPEEDGGALQTSAEYVYEPEENKTDIDPLYLQS NKRAALASSRLAEEETTLLDKISNNLEMVHDTANSVQLALNEFFVLYKQK LYEDKRHHLAIEQLMAEKIELKKKLLEIEQKKLSLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3995-PA | 322 | CG3995-PA | 1..322 | 15..336 | 1663 | 100 | Plus |
CG30428-PA | 263 | CG30428-PA | 3..256 | 87..315 | 187 | 25.6 | Plus |
CG30428-PB | 247 | CG30428-PB | 1..240 | 101..315 | 163 | 25 | Plus |
Translation from 42 to 1010
> LD44187.pep MKRKTSEIWCFFRAVDDTFAVCNICKAKLSYKTTTTNLSKHMNRMHPTSG LNRNSKYKFQPQTTIAIDRNKAKPRNSTQELILLEFVKKHPRLLQNPTWE TRGNLESLWEELSSELNSHGPPRKDIATWRRALKDWKRFILRKVEKNEMQ NMPFGTSLTSSEETIATLCRLNEDVSQIIMKVSDDEMHENSTTEFDVDEV EDVVPEEDGGALQTSAEYVYEPEENKTDIDPLYLQSNKRAALASSRLAEE ETTLLDKISNNLEMVHDTANSVQLALNEFFVLYKQKLYEDKRHHLAIEQL MAEKIELKKKLLEIEQKKLSLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17912-PA | 323 | GF17912-PA | 1..323 | 1..322 | 1319 | 78.2 | Plus |
Dana\GF13363-PA | 294 | GF13363-PA | 2..110 | 72..184 | 166 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16795-PA | 322 | GG16795-PA | 1..322 | 1..322 | 1600 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19556-PA | 319 | GH19556-PA | 1..319 | 1..322 | 919 | 61.7 | Plus |
Dgri\GH22659-PA | 384 | GH22659-PA | 119..227 | 71..173 | 178 | 34.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3995-PA | 322 | CG3995-PA | 1..322 | 1..322 | 1663 | 100 | Plus |
CG30428-PA | 263 | CG30428-PA | 3..256 | 73..301 | 187 | 25.6 | Plus |
CG30428-PB | 247 | CG30428-PB | 1..240 | 87..301 | 163 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23852-PA | 323 | GI23852-PA | 1..323 | 1..322 | 1115 | 64.8 | Plus |
Dmoj\GI21172-PA | 281 | GI21172-PA | 14..131 | 68..179 | 175 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22988-PA | 319 | GL22988-PA | 1..319 | 1..322 | 1200 | 69.8 | Plus |
Dper\GL22369-PA | 318 | GL22369-PA | 92..208 | 68..178 | 151 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17831-PA | 319 | GA17831-PA | 1..319 | 1..322 | 1208 | 69.8 | Plus |
Dpse\GA15840-PB | 251 | GA15840-PB | 1..92 | 87..171 | 150 | 32.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15390-PA | 322 | GM15390-PA | 1..322 | 1..322 | 1689 | 98.4 | Plus |
Dsec\GM11929-PA | 274 | GM11929-PA | 10..117 | 71..171 | 180 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20256-PA | 322 | GD20256-PA | 1..322 | 1..322 | 1678 | 97.8 | Plus |
Dsim\GD11923-PA | 233 | GD11923-PA | 1..107 | 72..171 | 174 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10567-PA | 321 | GJ10567-PA | 1..321 | 1..322 | 1114 | 64.3 | Plus |
Dvir\GJ21029-PA | 273 | GJ21029-PA | 2..117 | 70..179 | 173 | 33.9 | Plus |
Dvir\GJ15844-PA | 333 | GJ15844-PA | 53..175 | 61..175 | 149 | 31.7 | Plus |