BDGP Sequence Production Resources |
Search the DGRC for LD44262
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 442 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6401-RA |
Protein status: | LD44262.pep: gold |
Preliminary Size: | 1712 |
Sequenced Size: | 1632 |
Gene | Date | Evidence |
---|---|---|
CG6401 | 2001-01-01 | Release 2 assignment |
CG6401 | 2002-06-12 | Blastp of sequenced clone |
CG6401 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6401 | 2008-04-29 | Release 5.5 accounting |
CG6401 | 2008-08-15 | Release 5.9 accounting |
CG6401 | 2008-12-18 | 5.12 accounting |
1632 bp (1632 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122191
> LD44262.complete TGCACACTGTTGTTTTTTGCTTGCCGATTTTTGTTTAACATATTGTATTT ATTTGTTTATATGTGGTATGTCAAATTACTGGAAGCCGCAGAACCCAAAG AGTGAAAAATGCGCATCTGCATGGTGTCGGACTTCTTCTATCCGAGCATC GGAGGGGTCGAGGAGCACGTCTACAACCTTTCGCAAATGTTGCTCAGCTT GGGTCACAAGATCGTCGTGCTGACCCACGCCTACGGAGACTGCAGTGGCA TTCGCTATGTGACTGGCTACCTGAAGGTCTACTATCTGCCCATTAAGGTG TGCTACAACCAGTGCATACTGCCCACCGCTGTTTGCAATGTGCCGATGTT GCGAGCGGTGCTACTTCGTGAGCGGGTGGAAGTGGTCCATGGCCACTCTG CCTTCAGTGCTCTGGCGCACGAGGCACTGATGGTGGGCTCCCTCCTGGGG CTAAAGACTGTCTTTACCGATCACAGCCTCTTTGGCTTTGCGGACTTGTC AGCCGCTCTAACCAACAATCTGCTGGAGGTCAACTTGGGCATGGTCAATC ACGCCATCTGTGTATCTCACATAGGGAAGGAGAACACTGTTCTACGCGCT CGAGTAGCTAAACATCGAGTTTCCGTCATTCCCAATGCAGTCGACACTGC CCTGTTTACTCCCGATCCTCAACAGCGTCCGAGCAATGATATAATCAACA TTGTAGTGGCCTCCCGTCTTGTCTACCGCAAAGGCATTGATTTGCTAGCT GGCATCATTCCACGGTTCAAAAACACTCCCAACATAAACTTTATCATTGT GGGCGATGGACCTAAGCGTGATCTGCTGGAGGAGATTCGCGAAAAGACCA ATATGCAGGAAAGGGTTCAAATGGTGGGCGCCGTGGAGCATAACAGGGTT CGCGATTTCCTGGTGCGTGGCCACATCTTTTTGAATACCTCACTGACTGA GGCCTACTGCATGGCCATCGTTGAGGCGGCTTCCTGTGGACTGCAGGTGG TGTCCACCAGTGTGGGCGGAATTCCCGAAGTGCTACCCAAGAGTCTTATA CTGCTGGCAGAGCCCGAAATTGATGCCATTTACGCAGCGATTCTAATTGC CATCGACCGTCATCGAAAGAGTTCCTTTAAGGTTAGTCCATCAGTTGGCA ATGGGCATTTGGCCTCGGACGCTAATGGAAAGGTTAAGCGGCGACGTCGC AGGAAAGTCGATACTCCTATCTCTCCTACACAACTGCCAGCAGTCTCTGC TCCTCCTGCGGATCAGAACAGCTCTACAGAGCCCGTAATGTGTCCATATA GATGTAATGAGTTGGTGGAAACGCTTTACAATTGGGAGGATGTTGCCCTT CGCACAGTAAAGGTGTACGATCGCGTTTTAAATGAACGCTCTTTCACCAC TAGCGAGCTGGTGTTTGCGGTGTGGCAGCACGGATCCTGGTTTCTGGTGT TCTTCGTTGTGGCCCACTTCTTAATGCGCTTGCTGGAGCTTTGGCGTCCT CGGAAACACGTAGAGATAGCGCAGGATGTACAACGTAGGGCCAGCTAGCA AACACCAAACGGATTCCATTCTTCCATCAACTAGCCAATTATATATTTAT GCGATAGATTTTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6401-RA | 1902 | CG6401-RA | 59..1674 | 1..1616 | 8080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13624985..13625904 | 1614..695 | 4600 | 100 | Minus |
chr2R | 21145070 | chr2R | 13626266..13626513 | 456..209 | 1240 | 100 | Minus |
chr2R | 21145070 | chr2R | 13625961..13626200 | 694..455 | 1200 | 100 | Minus |
chr2R | 21145070 | chr2R | 13626581..13626790 | 210..1 | 1050 | 100 | Minus |
chr2RHet | 3288813 | chr2RHet | 2213679..2213851 | 370..198 | 610 | 90.2 | Minus |
chr2RHet | 3288813 | chr2RHet | 2303724..2303896 | 370..198 | 610 | 90.2 | Minus |
chr2RHet | 3288813 | chr2RHet | 2213579..2213682 | 509..406 | 265 | 83.7 | Minus |
chr2RHet | 3288813 | chr2RHet | 2303624..2303727 | 509..406 | 265 | 83.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17737850..17738771 | 1616..695 | 4610 | 100 | Minus |
2R | 25286936 | 2R | 17739133..17739380 | 456..209 | 1240 | 100 | Minus |
2R | 25286936 | 2R | 17738828..17739067 | 694..455 | 1200 | 100 | Minus |
2R | 25286936 | 2R | 17739448..17739657 | 210..1 | 1050 | 100 | Minus |
2R | 25286936 | 2R | 3384077..3384249 | 198..370 | 610 | 90.2 | Plus |
2R | 25286936 | 2R | 3384246..3384349 | 406..509 | 265 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17739049..17739970 | 1616..695 | 4610 | 100 | Minus |
2R | 25260384 | 2R | 17740332..17740579 | 456..209 | 1240 | 100 | Minus |
2R | 25260384 | 2R | 17740027..17740266 | 694..455 | 1200 | 100 | Minus |
2R | 25260384 | 2R | 17740647..17740856 | 210..1 | 1050 | 100 | Minus |
2R | 25260384 | 2R | 3384077..3384249 | 198..370 | 610 | 90.1 | Plus |
2R | 25260384 | 2R | 3384246..3384349 | 406..509 | 265 | 83.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13624985..13625904 | 695..1614 | 100 | <- | Minus |
chr2R | 13625961..13626198 | 457..694 | 100 | <- | Minus |
chr2R | 13626266..13626511 | 211..456 | 100 | <- | Minus |
chr2R | 13626581..13626790 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1440 | 109..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1440 | 109..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1440 | 109..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1440 | 109..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1440 | 109..1548 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1614 | 1..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1614 | 1..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 29..1642 | 1..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 1..1614 | 1..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6401-RA | 29..1642 | 1..1614 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17737852..17738771 | 695..1614 | 100 | <- | Minus |
2R | 17738828..17739065 | 457..694 | 100 | <- | Minus |
2R | 17739133..17739378 | 211..456 | 100 | <- | Minus |
2R | 17739448..17739657 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17737852..17738771 | 695..1614 | 100 | <- | Minus |
2R | 17738828..17739065 | 457..694 | 100 | <- | Minus |
2R | 17739133..17739378 | 211..456 | 100 | <- | Minus |
2R | 17739448..17739657 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17737852..17738771 | 695..1614 | 100 | <- | Minus |
2R | 17738828..17739065 | 457..694 | 100 | <- | Minus |
2R | 17739133..17739378 | 211..456 | 100 | <- | Minus |
2R | 17739448..17739657 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13625357..13626276 | 695..1614 | 100 | <- | Minus |
arm_2R | 13626333..13626570 | 457..694 | 100 | <- | Minus |
arm_2R | 13626638..13626883 | 211..456 | 100 | <- | Minus |
arm_2R | 13626953..13627162 | 1..210 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17739051..17739970 | 695..1614 | 100 | <- | Minus |
2R | 17740027..17740264 | 457..694 | 100 | <- | Minus |
2R | 17740332..17740577 | 211..456 | 100 | <- | Minus |
2R | 17740647..17740856 | 1..210 | 100 | Minus |
Translation from 108 to 1547
> LD44262.hyp MRICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRY VTGYLKVYYLPIKVCYNQCILPTAVCNVPMLRAVLLRERVEVVHGHSAFS ALAHEALMVGSLLGLKTVFTDHSLFGFADLSAALTNNLLEVNLGMVNHAI CVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTPDPQQRPSNDIINIVV ASRLVYRKGIDLLAGIIPRFKNTPNINFIIVGDGPKRDLLEEIREKTNMQ ERVQMVGAVEHNRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVST SVGGIPEVLPKSLILLAEPEIDAIYAAILIAIDRHRKSSFKVSPSVGNGH LASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQNSSTEPVMCPYRCN ELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQHGSWFLVFFV VAHFLMRLLELWRPRKHVEIAQDVQRRAS*
Translation from 108 to 1547
> LD44262.pep MRICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRY VTGYLKVYYLPIKVCYNQCILPTAVCNVPMLRAVLLRERVEVVHGHSAFS ALAHEALMVGSLLGLKTVFTDHSLFGFADLSAALTNNLLEVNLGMVNHAI CVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTPDPQQRPSNDIINIVV ASRLVYRKGIDLLAGIIPRFKNTPNINFIIVGDGPKRDLLEEIREKTNMQ ERVQMVGAVEHNRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVST SVGGIPEVLPKSLILLAEPEIDAIYAAILIAIDRHRKSSFKVSPSVGNGH LASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQNSSTEPVMCPYRCN ELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQHGSWFLVFFV VAHFLMRLLELWRPRKHVEIAQDVQRRAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13228-PA | 476 | GF13228-PA | 1..476 | 1..479 | 2102 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21024-PA | 479 | GG21024-PA | 1..479 | 1..479 | 2271 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22654-PA | 470 | GH22654-PA | 1..468 | 1..477 | 1914 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-A-PB | 479 | CG6401-PB | 1..479 | 1..479 | 2464 | 100 | Plus |
PIG-A-PA | 479 | CG6401-PA | 1..479 | 1..479 | 2464 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21166-PA | 471 | GI21166-PA | 1..471 | 1..479 | 1957 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17279-PA | 481 | GL17279-PA | 1..481 | 1..479 | 2094 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19564-PA | 481 | GA19564-PA | 1..481 | 1..479 | 2085 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19954-PA | 479 | GM19954-PA | 1..479 | 1..479 | 2339 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25445-PA | 479 | GD25445-PA | 1..479 | 1..479 | 2463 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21019-PA | 472 | GJ21019-PA | 1..472 | 1..479 | 2032 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19467-PA | 489 | GK19467-PA | 1..485 | 1..475 | 2028 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13967-PA | 479 | GE13967-PA | 1..479 | 1..479 | 2290 | 93.7 | Plus |