Clone LD44281 Report

Search the DGRC for LD44281

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:442
Well:81
Vector:pOT2
Associated Gene/Transcriptsrp-RD
Protein status:LD44281.pep: gold
Preliminary Size:4461
Sequenced Size:3811

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3992 2004-02-02 Blastp of sequenced clone
srp 2008-04-29 Release 5.5 accounting
srp 2008-08-15 Release 5.9 accounting
srp 2008-12-18 5.12 accounting

Clone Sequence Records

LD44281.complete Sequence

3811 bp (3811 high quality bases) assembled on 2004-02-02

GenBank Submission: BT011543

> LD44281.complete
CGGGTCTGGTCGGGTCCACTCCCAACCGAACCCATCCCGTGCCATCCCAT
CCTATCGATTGCATCCGGCACACCGGTGCGGATTCGTGGGTCGTGTCCCG
GCGATTATCACCGTGATCTGTTGGGCGTGAAACCGAAGAAAACCCTTTGA
GCGTGGAAAAATGTGAGGAAAGTTGCGCCGGCGCAAGGGAAATCCTTCAA
ACGTGTGTTTAACCACAAAAGCGACGTGAGTTTAACCAACATAATCGACG
GTTGGGCGCCCGGAAAAGCCACCACCCGCCTCCTCATCGTTCCCCGAAAG
AGTTGTGATCCGTCGGCGTGACCTGTGTGACACTTTCATTTGCCGGGTTA
ACGCCCCCTCAAAGTCCGGACAGTATCGAAACCGAAAATTTAACGCTTGC
TTAGCGCCTGAGATCGCCAGATGCCCAGATGTCCGCGGCTCGGTCATCAT
CGATGAAAACCACATGGGCCGAACGAACGCCCCTCATAATGAGCGCAACG
GATCCGAGCACTCGATTCTGGACCTAGCCACAATGGATTTTCAATCGCTG
TCGGAATATGCATGGGAATCTGGCCATGGACAACTTGATTTTGTGTGTAC
TTTTTTGCGGTCGCTGGTAGTCGACAGTCAACCAACCACAATAACAGCGA
CCACAACAACACCAATCGAGCAACAGTAGAGGCCGCCCCAGCTACAACAA
CAACACGTTCCGGCATGGCCTCTACCTCGGCCTGCCCCCACCCACCCCTT
CTTCAACTTTCCGCGCCTGTTGTTGCTGCTGATGTAGTGAGAGGCGGAGC
AACGCAGCACAAAGCGGAGGCAGTAAGTGCGATAAGGCAGGCATTAGGCG
CAAGCACAAGCGAATAGTAAGCGAAGGAAGAGAGGAGCCAAAGAGAGGGA
TCCACAAAAAGAGAAAGACTCTGTTTATGCTGGCTCGTTGCTTACTCAGA
CTGCCAATGGCATTCAGTACGGCATGCAGTCCCCCAACCAAACACAAGCC
CATCTCCAGCAGCAGCACCATCAGCAGCAGCAGCAACAACATCAGCAACA
CCAGCAGCAGCAACTGCAGCAGCAGCAGCAGCAACATCACCACAATCAAC
ACCAGCACCACAACTCCAGCAGCAGCAGTCCGGGGCCAGCGGGTCTGCAC
CACTCGAGCTCCTCGGCGGCCACGGCGGCAGCGGTGGCTGCGGCAACGGC
GGCGGTCAATGGACACAACAGCTCCTTGGAGGACGGCTACGGATCGCCAA
GGAGCAGCCACAGTGGCGGCGGGGGCGGTGGTACTCTGCCAGCCTTCCAG
CGGATCGCATACCCCAACAGTGGCTCCGTGGAACGTTACGCTCCGATAAC
CAATTATCGCGGTCAGAACGATACCTGGTTCGATCCGTTAAGCTACGCCA
CCTCCTCTTCCGGGCAGGCGCAGTTGGGCGTCGGTGTTGGAGCCGGAGTG
GTCTCGAATGTGATACGGAATGGGCGGGCCATTTCGGCTGCTAATGCAGC
AGCTGCAGCCGCCGCGGATGGAACCACTGGACGCGTAGATCCTGGAACCT
TTCTCTCCGCCTCGGCATCGTTGTCAGCAATGGCCGCTGAATCAGGCGGG
GATTTCTATAAACCCAACTCATTTAATGTGGGCGGCGGTGGCCGTAGTAA
GGCTAACACGAGTGGTGCCGCCAGCTCCTACTCCTGTCCAGGCTCGAATG
CAACCTCGGCGGCGACTTCGGCGGTGGCGTCGGGAACGGCAGCAACTGCA
GCGACGACGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAG
CGCCTCAAAGCGAGCCGGACTTTCCTGCTCCAACTGCCACACCACCCACA
CTTCGTTGTGGCGCCGCAATCCCGCCGGAGAGCCCGTCTGCAATGCATGC
GGCCTGTACTATAAGCTCCACAGTGTCCCACGGCCACTGACCATGAAAAA
GGACACCATTCAGAAACGCAAGCGCAAGCCGAAAGGAACGAAGAGCGAGA
AGTCCAAGTCAAAGTCAAAGAACGCTTTGAATGCCATCATGGAAAGTGGT
TCATTGGTGACCAATTGCCATAACGTTGGTGTCGTCCTGGACAGCAGCCA
GATGGATGTCAATGACGATATGAAACCACAGCTCGATCTGAAACCATACA
ACTCATACTCATCGCAGCCGCAGCAACAGCTTCCACAGTACCAGCAGCAG
CAGCAGCTGCTAATGGCTGATCAGCACTCATCGGCGGCCAGCTCGCCCCA
TAGCATGGGTTCCACCTCATTGTCGCCATCAGCCATGTCACATCAGCATC
AGACTCATCCACATCAGCAGCAACAGCAGCAGCTCTGTTCCGGGCTGGAC
ATGTCGCCCAACTCAAACTACCAAATGTCGCCGCTCAACATGCAGCAGCA
TCAGCAGCAGCAATCGTGCAGCATGCAGCACTCACCCAGCACACCCACAT
CCATCTTCAACACCCCATCGCCAACTCACCAGCTCCACAATAACAATAAC
AACAACAACAACAGCTCGATCTTCAACAACAACAACAACAACAATAGTAG
TAGCAATGAGAATAACAACAAACTTATACAGAAATATCTGCAAGCTCAGC
AACTGAGCAGCAGCAGCAACAGCGGCTCCACCAGCGACCACCAGTTGCTG
GCCCAACTGCTGCCGAACTCCATTACGGCGGCAGCAGCAGCAGCAGCGGC
GGCGGCAGCGGCGGCGATCAAGACGGAGGCCTTGTCGCTCACCTCCCAGG
CCAACTGCTCCACAGCGTCGGCGGGACTTATGGTCACCTCAACACCGACC
ACGGCATCGAGCACATTATCGTCCCTGAGTCACAGCAACATTATTAGTCT
GCAGAATCCGTATCACCAGGCCGGAATGACGCTGTGCAAGCCCACGAGAC
CTTCCCCACCCTACTACCTGACTCCGGAGGAGGATGAGCAGCCCGCTCTC
ATCAAGATGGAAGAGATGGATCAGTCGCAACAGCAACAACAGCAGCAGCA
GCATCAGCAGCAGCAACATGGAGAGATAATGCTCAGCCGATCGGCCTCGC
TGGACGAGCACTACGAACTGGCCGCCTTCCAGAGACATCAGCAGCAGCAG
CAACAGCTGCAGCAGCAGACTGCCGCCCTCTTGGGTCAACATGAGCAGCA
TGTGACCAACTATGCGATGCATAAGTTCGGCGTTGACCGGGAAACAGTGG
TGAAGATGGAGTAGGCGCGACACGCTGTATGTCGCACGACCAAAGATTCT
GTTGTTACATTAATCTCATAGCTCCAAAGAATTTATAGCCTGTATACCAA
GAGCAGTTCTCAAAGAACACTCATCTATCTAAAATCTATCGAATCATTAG
TTGTACATACGGTCTAAATCGATTGATACTTACATTTTCGTCGAATTTTA
ATGGTCCACTACTCGAAATTTGTTATGAAATACTAGTTTAATTGTTAGCA
AAATGCCAACAGCATAAAATCGATTCAGAAACTAGGCTAAGAATGTTCAT
TTAAAATTTTGTTATCAAATCGAATACCTTTTGAGATTTCCTACAATCAA
ATTCCACTTAGATATTAGCCACAAATCATAGTTAAGTCAACCAAAAAAAG
GCAAATGAAAACGAAAAAGAATAACAATCGAAGTAACCAATAATCTCATG
CAATTAGCTATTAATTTATATATTTTTTATAGCATTATTATATATTTAAT
GCAATTTAAGTTTTAGTCTGGTATATTTTTTAACATCATATTTGCAATAT
TAATTTTATTTCTCTTGAGTTAATAAAAGACAATTGTCCCTGAAAAAAAA
AAAAAAAAAAA

LD44281.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:04:16
Subject Length Description Subject Range Query Range Score Percent Strand
srp-RD 3848 srp-RD 53..3847 1..3795 18975 100 Plus
srp.d 3278 srp.d 68..3277 586..3795 16050 100 Plus
srp-RA 4495 srp-RA 1618..4494 919..3795 14385 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11827009..11828684 2117..3792 8380 100 Plus
chr3R 27901430 chr3R 11810809..11811395 1..587 2935 100 Plus
chr3R 27901430 chr3R 11823924..11824371 919..1366 2240 100 Plus
chr3R 27901430 chr3R 11817715..11818046 587..918 1660 100 Plus
chr3R 27901430 chr3R 11825792..11826009 1581..1798 1090 100 Plus
chr3R 27901430 chr3R 11824441..11824657 1364..1580 1070 99.5 Plus
chr3R 27901430 chr3R 11826354..11826519 1798..1963 830 100 Plus
chr3R 27901430 chr3R 11826770..11826926 1961..2117 785 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:39:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:35:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16002406..16004084 2117..3795 8395 100 Plus
3R 32079331 3R 15986201..15986787 1..587 2935 100 Plus
3R 32079331 3R 15999326..15999773 919..1366 2240 100 Plus
3R 32079331 3R 15993119..15993450 587..918 1660 100 Plus
3R 32079331 3R 16001189..16001406 1581..1798 1090 100 Plus
3R 32079331 3R 15999843..16000059 1364..1580 1085 100 Plus
3R 32079331 3R 16001751..16001916 1798..1963 830 100 Plus
3R 32079331 3R 16002167..16002323 1961..2117 785 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15743237..15744915 2117..3795 8395 100 Plus
3R 31820162 3R 15727032..15727618 1..587 2935 100 Plus
3R 31820162 3R 15740157..15740604 919..1366 2240 100 Plus
3R 31820162 3R 15733950..15734281 587..918 1660 100 Plus
3R 31820162 3R 15742020..15742237 1581..1798 1090 100 Plus
3R 31820162 3R 15740674..15740890 1364..1580 1085 100 Plus
3R 31820162 3R 15742582..15742747 1798..1963 830 100 Plus
3R 31820162 3R 15742998..15743154 1961..2117 785 100 Plus
2R 25260384 2R 23653131..23653216 1006..1091 250 86 Plus
X 23527363 X 5619579..5619680 1010..1111 195 79.4 Plus
3L 28103327 3L 22076033..22076101 1043..1111 195 85.5 Plus
Blast to na_te.dros performed 2019-03-15 18:35:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2938 2506..3150 353 55.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6681..6899 2492..2709 309 64.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6691..6946 2462..2717 309 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2309..2539 2462..2695 306 63 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2666 2257..2640 305 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2422..2979 2124..2657 290 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2880 2165..2730 271 55.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2344..2938 2124..2707 271 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2354..2932 2164..2723 269 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6927 2426..2630 269 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2712..2955 985..1222 268 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2250..2534 2369..2644 266 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2373..2845 2277..2720 260 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6914 2503..2709 241 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..7106 2393..2730 207 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6914 2165..2333 204 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6886 2539..2717 198 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..7091 2291..2638 198 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6697..6955 2273..2547 197 60.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..7092 2276..2658 184 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6728..6865 2579..2711 183 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6775..7181 2290..2697 180 55.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6890 2164..2333 175 59.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..7055 2165..2461 175 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6839 2597..2712 171 65.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2324..2466 2578..2709 165 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6711..7074 2181..2555 162 55 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2442 2579..2709 152 61.1 Plus
roo 9092 roo DM_ROO 9092bp 966..1163 2487..2685 146 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6416..6572 2485..2644 143 59.5 Plus
roo 9092 roo DM_ROO 9092bp 1061..1165 2524..2637 143 64 Plus
roo 9092 roo DM_ROO 9092bp 1081..1124 2290..2333 139 79.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2627..2989 2164..2513 136 54.1 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 5612..5666 2277..2333 135 75.4 Plus
TART-C 11124 TART-C TARTC 11124bp 7067..7121 2277..2333 135 75.4 Plus
roo 9092 roo DM_ROO 9092bp 1059..1157 2540..2641 133 61.8 Plus
roo 9092 roo DM_ROO 9092bp 1102..1145 2290..2333 130 77.3 Plus
Stalker4 7359 Stalker4 STALKER4 7359bp 6361..6495 3772..3641 128 58.4 Minus
Stalker 7256 Stalker STALKER 7256bp 6255..6389 3772..3641 128 58.4 Minus
Tirant 8526 Tirant TIRANT 8526bp 2414..2526 578..682 124 60.2 Plus
1360 3409 1360 1360 3409bp 883..937 3443..3497 122 69.1 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 960..1012 2282..2334 121 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1526..1591 2578..2642 120 66.7 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 7943..8022 2294..2372 118 65.9 Plus
TART-C 11124 TART-C TARTC 11124bp 9387..9466 2294..2372 118 65.9 Plus
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 5306..5399 3774..3681 118 63.9 Minus

LD44281.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:36:51 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11810809..11811395 1..587 93 -> Plus
chr3R 11817716..11817760 588..632 100 == Plus
chr3R 11817834..11818046 706..918 100 -> Plus
chr3R 11823924..11824011 919..1006 100 == Plus
chr3R 11824092..11824371 1087..1366 85 -> Plus
chr3R 11824444..11824657 1367..1580 99 -> Plus
chr3R 11825792..11825917 1581..1706 100 == Plus
chr3R 11825971..11826009 1760..1798 100 -> Plus
chr3R 11826355..11826519 1799..1963 100 -> Plus
chr3R 11826773..11826926 1964..2117 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:37:32 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RA 1493..3795 912..3214 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:40:10 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RA 1493..3795 912..3214 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:08:33 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RA 1493..3795 912..3214 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:28:59 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RA 1493..3795 912..3214 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:10 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RA 1493..3795 912..3214 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:37:31 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RD 1..3792 1..3792 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:40:10 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RD 1..3792 1..3792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:08:33 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RD 50..3841 1..3792 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:28:59 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RD 1..3792 1..3792 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:10 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
srp-RD 50..3841 1..3792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:36:51 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15986201..15986787 1..587 100 -> Plus
3R 15993120..15993450 588..918 100 -> Plus
3R 15999326..15999773 919..1366 100 -> Plus
3R 15999846..16000059 1367..1580 100 -> Plus
3R 16001189..16001406 1581..1798 100 -> Plus
3R 16001752..16001916 1799..1963 100 -> Plus
3R 16002170..16002323 1964..2117 100 -> Plus
3R 16002407..16004081 2118..3792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:36:51 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15986201..15986787 1..587 100 -> Plus
3R 15993120..15993450 588..918 100 -> Plus
3R 15999326..15999773 919..1366 100 -> Plus
3R 15999846..16000059 1367..1580 100 -> Plus
3R 16001189..16001406 1581..1798 100 -> Plus
3R 16001752..16001916 1799..1963 100 -> Plus
3R 16002170..16002323 1964..2117 100 -> Plus
3R 16002407..16004081 2118..3792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:36:51 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15986201..15986787 1..587 100 -> Plus
3R 15993120..15993450 588..918 100 -> Plus
3R 15999326..15999773 919..1366 100 -> Plus
3R 15999846..16000059 1367..1580 100 -> Plus
3R 16001189..16001406 1581..1798 100 -> Plus
3R 16001752..16001916 1799..1963 100 -> Plus
3R 16002170..16002323 1964..2117 100 -> Plus
3R 16002407..16004081 2118..3792 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:08:33 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11811923..11812509 1..587 100 -> Plus
arm_3R 11818842..11819172 588..918 100 -> Plus
arm_3R 11825048..11825495 919..1366 100 -> Plus
arm_3R 11825568..11825781 1367..1580 100 -> Plus
arm_3R 11826911..11827128 1581..1798 100 -> Plus
arm_3R 11827474..11827638 1799..1963 100 -> Plus
arm_3R 11827892..11828045 1964..2117 100 -> Plus
arm_3R 11828129..11829803 2118..3792 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:01:23 Download gff for LD44281.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15743238..15744912 2118..3792 100   Plus
3R 15727032..15727618 1..587 100 -> Plus
3R 15733951..15734281 588..918 100 -> Plus
3R 15740157..15740604 919..1366 100 -> Plus
3R 15740677..15740890 1367..1580 100 -> Plus
3R 15742020..15742237 1581..1798 100 -> Plus
3R 15742583..15742747 1799..1963 100 -> Plus
3R 15743001..15743154 1964..2117 100 -> Plus

LD44281.pep Sequence

Translation from 973 to 3213

> LD44281.pep
MQSPNQTQAHLQQQHHQQQQQQHQQHQQQQLQQQQQQHHHNQHQHHNSSS
SSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSLEDGYGSPRSSHSGGG
GGGTLPAFQRIAYPNSGSVERYAPITNYRGQNDTWFDPLSYATSSSGQAQ
LGVGVGAGVVSNVIRNGRAISAANAAAAAAADGTTGRVDPGTFLSASASL
SAMAAESGGDFYKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSA
VASGTAATAATTLDEHVSRANSRRLSASKRAGLSCSNCHTTHTSLWRRNP
AGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSKN
ALNAIMESGSLVTNCHNVGVVLDSSQMDVNDDMKPQLDLKPYNSYSSQPQ
QQLPQYQQQQQLLMADQHSSAASSPHSMGSTSLSPSAMSHQHQTHPHQQQ
QQQLCSGLDMSPNSNYQMSPLNMQQHQQQQSCSMQHSPSTPTSIFNTPSP
THQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKLIQKYLQAQQLSSSSNS
GSTSDHQLLAQLLPNSITAAAAAAAAAAAAAIKTEALSLTSQANCSTASA
GLMVTSTPTTASSTLSSLSHSNIISLQNPYHQAGMTLCKPTRPSPPYYLT
PEEDEQPALIKMEEMDQSQQQQQQQQHQQQQHGEIMLSRSASLDEHYELA
AFQRHQQQQQQLQQQTAALLGQHEQHVTNYAMHKFGVDRETVVKME*

LD44281.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11857-PA 1271 GF11857-PA 533..1271 1..746 1205 57.2 Plus
Dana\GF11891-PA 551 GF11891-PA 222..314 272..357 282 58.1 Plus
Dana\GF16170-PA 703 GF16170-PA 520..587 273..334 259 70.6 Plus
Dana\GF11880-PA 710 GF11880-PA 503..561 279..337 254 67.8 Plus
Dana\GF15767-PA 810 GF15767-PA 632..741 252..361 228 43.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16969-PA 1244 GG16969-PA 572..1244 53..746 2141 87.5 Plus
Dere\GG17473-PA 487 GG17473-PA 304..371 273..334 258 70.6 Plus
Dere\GG16970-PA 749 GG16970-PA 540..598 279..337 254 67.8 Plus
Dere\GG10108-PA 838 GG10108-PA 687..790 282..381 229 41.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18757-PA 978 GH18757-PA 272..978 47..746 1080 52.2 Plus
Dgri\GH18759-PA 528 GH18759-PA 202..267 272..337 277 69.7 Plus
Dgri\GH18758-PA 749 GH18758-PA 519..577 279..337 251 67.8 Plus
Dgri\GH13551-PA 911 GH13551-PA 744..855 282..398 236 41.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
srp-PF 746 CG3992-PF 1..746 1..746 3862 100 Plus
srp-PD 746 CG3992-PD 1..746 1..746 3862 100 Plus
srp-PA 1264 CG3992-PA 519..1264 1..746 3862 100 Plus
srp-PE 731 CG3992-PE 1..731 1..746 3462 91.8 Plus
srp-PB 1249 CG3992-PB 519..1249 1..746 3462 91.8 Plus
srp-PG 469 CG3992-PG 1..424 1..430 1994 91.2 Plus
pnr-PC 537 CG3978-PC 42..481 116..586 354 28.5 Plus
grn-PB 699 CG9656-PB 272..593 22..345 352 35.4 Plus
grn-PC 712 CG9656-PC 272..593 22..345 352 35.4 Plus
pnr-PA 540 CG3978-PA 42..484 116..586 340 28.3 Plus
pnr-PD 488 CG3978-PD 9..432 140..586 338 28.3 Plus
pnr-PB 488 CG3978-PB 9..432 140..586 338 28.3 Plus
GATAe-PC 731 CG10278-PC 211..716 6..470 337 26.8 Plus
GATAe-PB 731 CG10278-PB 211..716 6..470 337 26.8 Plus
GATAe-PA 746 CG10278-PA 226..731 6..470 337 26.8 Plus
grn-PA 486 CG9656-PA 312..380 276..345 261 71.4 Plus
Alh-PF 1165 CG1070-PF 82..789 12..715 261 21 Plus
sr-PA 1186 CG7847-PA 166..858 1..722 231 22.7 Plus
sr-PD 1271 CG7847-PD 166..858 1..722 231 22.7 Plus
GATAd-PC 842 CG5034-PC 660..796 255..385 227 36.5 Plus
GATAd-PB 842 CG5034-PB 660..796 255..385 227 36.5 Plus
GATAd-PA 842 CG5034-PA 660..796 255..385 227 36.5 Plus
Smr-PF 3601 CG4013-PF 201..651 2..491 225 24.3 Plus
Smr-PE 3601 CG4013-PE 201..651 2..491 225 24.3 Plus
Smr-PD 3601 CG4013-PD 201..651 2..491 225 24.3 Plus
Smr-PG 3607 CG4013-PG 207..657 2..491 225 24.3 Plus
Smr-PF 3601 CG4013-PF 5..372 324..701 213 24 Plus
Smr-PE 3601 CG4013-PE 5..372 324..701 213 24 Plus
Smr-PD 3601 CG4013-PD 5..372 324..701 213 24 Plus
ovo-PA 975 CG6824-PA 392..675 6..263 211 31.4 Plus
ovo-PD 1028 CG6824-PD 445..728 6..263 211 31.4 Plus
Smr-PG 3607 CG4013-PG 5..378 324..701 207 23.7 Plus
Pdp1-PJ 633 CG17888-PJ 158..387 2..272 199 29.9 Plus
Pdp1-PD 647 CG17888-PD 158..387 2..272 199 29.9 Plus
CG32767-PG 1280 CG32767-PG 705..1114 245..738 199 23.6 Plus
CG32767-PH 1281 CG32767-PH 705..1115 245..738 197 23.5 Plus
CG32767-PF 1281 CG32767-PF 705..1115 245..738 197 23.5 Plus
CG32767-PE 1281 CG32767-PE 705..1115 245..738 197 23.5 Plus
CG32767-PD 1281 CG32767-PD 705..1115 245..738 197 23.5 Plus
CG32767-PC 1281 CG32767-PC 705..1115 245..738 197 23.5 Plus
kis-PF 5191 CG3696-PF 302..955 2..622 194 22.4 Plus
kis-PE 5252 CG3696-PE 302..955 2..622 194 22.4 Plus
kis-PA 5322 CG3696-PA 302..955 2..622 194 22.4 Plus
kis-PD 5343 CG3696-PD 302..955 2..622 194 22.4 Plus
kis-PC 5517 CG3696-PC 302..955 2..622 194 22.4 Plus
Tlk-PG 1489 CG34412-PG 24..349 372..726 193 24.1 Plus
ovo-PC 1222 CG6824-PC 817..916 6..104 192 46.6 Plus
ovo-PE 1351 CG6824-PE 946..1045 6..104 192 46.6 Plus
ovo-PB 1351 CG6824-PB 946..1045 6..104 192 46.6 Plus
BtbVII-PF 907 CG43365-PF 179..504 2..294 191 25.3 Plus
sr-PE 906 CG7847-PE 23..578 178..722 190 23.2 Plus
sr-PB 906 CG7847-PB 23..578 178..722 190 23.2 Plus
Eip74EF-PA 829 CG32180-PA 302..606 430..715 187 28.4 Plus
Eip74EF-PE 844 CG32180-PE 317..621 430..715 187 28.4 Plus
Eip74EF-PC 868 CG32180-PC 341..645 430..715 187 28.4 Plus
Eip74EF-PA 829 CG32180-PA 570..702 2..120 170 39.1 Plus
Eip74EF-PE 844 CG32180-PE 585..717 2..120 170 39.1 Plus
Eip74EF-PC 868 CG32180-PC 609..741 2..120 170 39.1 Plus
Tlk-PG 1489 CG34412-PG 321..741 10..430 167 23.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:41:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22647-PA 1005 GI22647-PA 224..1005 1..746 1090 52.3 Plus
Dmoj\GI24284-PA 378 GI24284-PA 195..262 273..334 258 70.6 Plus
Dmoj\GI22648-PA 750 GI22648-PA 521..579 279..337 254 67.8 Plus
Dmoj\GI18290-PA 469 GI18290-PA 405..459 282..336 213 60 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12212-PA 1126 GL12212-PA 584..939 49..394 640 55.4 Plus
Dper\GL23278-PA 705 GL23278-PA 522..589 273..334 260 70.6 Plus
Dper\GL12213-PA 760 GL12213-PA 536..621 279..364 256 52.3 Plus
Dper\GL19159-PA 803 GL19159-PA 653..718 282..347 223 54.5 Plus
Dper\GL12212-PA 1126 GL12212-PA 1026..1126 644..746 176 51.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26230-PA 1316 GA26230-PA 561..1316 23..746 893 53.4 Plus
Dpse\GA26230-PB 1295 GA26230-PB 591..1295 53..746 795 50.4 Plus
Dpse\GA21945-PA 699 GA21945-PA 516..583 273..334 260 70.6 Plus
Dpse\GA21945-PB 488 GA21945-PB 305..372 273..334 259 70.6 Plus
Dpse\GA10213-PA 759 GA10213-PA 539..597 279..337 256 69.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24275-PA 1238 GM24275-PA 510..1238 4..737 3634 95.8 Plus
Dsec\GM26366-PA 703 GM26366-PA 520..587 273..334 262 70.6 Plus
Dsec\GM24276-PA 733 GM24276-PA 524..584 279..339 255 67.2 Plus
Dsec\GM18170-PA 844 GM18170-PA 693..796 282..381 230 41.3 Plus
Dsec\GM24279-PA 494 GM24279-PA 210..401 272..503 224 32.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19064-PA 696 GD19064-PA 499..678 203..382 964 97.2 Plus
Dsim\GD19065-PA 83 GD19065-PA 1..83 662..746 413 97.6 Plus
Dsim\GD20889-PA 292 GD20889-PA 118..176 276..334 266 76.3 Plus
Dsim\GD19066-PA 736 GD19066-PA 523..581 279..337 255 67.8 Plus
Dsim\GD23678-PA 844 GD23678-PA 693..796 282..381 230 41.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:42:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23376-PA 1236 GJ23376-PA 474..1236 48..746 1032 50.9 Plus
Dvir\GJ23377-PA 771 GJ23377-PA 552..610 279..337 265 71.2 Plus
Dvir\GJ23061-PA 686 GJ23061-PA 503..570 273..334 261 70.6 Plus
Dvir\GJ18119-PA 860 GJ18119-PA 689..760 275..349 227 54.7 Plus
Dvir\GJ23378-PA 520 GJ23378-PA 203..362 272..476 189 32.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22843-PA 1047 GK22843-PA 571..815 122..378 541 60.1 Plus
Dwil\GK13255-PA 550 GK13255-PA 80..275 155..341 261 38.5 Plus
Dwil\GK12883-PA 491 GK12883-PA 309..376 273..334 258 70.6 Plus
Dwil\GK13254-PA 746 GK13254-PA 519..604 279..361 256 52.3 Plus
Dwil\GK18561-PA 858 GK18561-PA 696..765 282..351 224 52.9 Plus
Dwil\GK22843-PA 1047 GK22843-PA 833..1047 454..746 192 39.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:42:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24357-PA 1272 GE24357-PA 576..1272 53..746 2153 89.9 Plus
Dyak\GE24873-PA 707 GE24873-PA 524..591 273..334 262 70.6 Plus
Dyak\GE24358-PA 738 GE24358-PA 529..587 279..337 253 67.8 Plus
Dyak\GE18923-PA 838 GE18923-PA 687..790 282..381 229 41.3 Plus
Dyak\GE14693-PA 176 GE14693-PA 81..176 528..659 192 44.7 Plus

LD44281.hyp Sequence

Translation from 973 to 3213

> LD44281.hyp
MQSPNQTQAHLQQQHHQQQQQQHQQHQQQQLQQQQQQHHHNQHQHHNSSS
SSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSLEDGYGSPRSSHSGGG
GGGTLPAFQRIAYPNSGSVERYAPITNYRGQNDTWFDPLSYATSSSGQAQ
LGVGVGAGVVSNVIRNGRAISAANAAAAAAADGTTGRVDPGTFLSASASL
SAMAAESGGDFYKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSA
VASGTAATAATTLDEHVSRANSRRLSASKRAGLSCSNCHTTHTSLWRRNP
AGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSKN
ALNAIMESGSLVTNCHNVGVVLDSSQMDVNDDMKPQLDLKPYNSYSSQPQ
QQLPQYQQQQQLLMADQHSSAASSPHSMGSTSLSPSAMSHQHQTHPHQQQ
QQQLCSGLDMSPNSNYQMSPLNMQQHQQQQSCSMQHSPSTPTSIFNTPSP
THQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKLIQKYLQAQQLSSSSNS
GSTSDHQLLAQLLPNSITAAAAAAAAAAAAAIKTEALSLTSQANCSTASA
GLMVTSTPTTASSTLSSLSHSNIISLQNPYHQAGMTLCKPTRPSPPYYLT
PEEDEQPALIKMEEMDQSQQQQQQQQHQQQQHGEIMLSRSASLDEHYELA
AFQRHQQQQQQLQQQTAALLGQHEQHVTNYAMHKFGVDRETVVKME*

LD44281.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
srp-PF 746 CG3992-PF 1..746 1..746 3862 100 Plus
srp-PD 746 CG3992-PD 1..746 1..746 3862 100 Plus
srp-PA 1264 CG3992-PA 519..1264 1..746 3862 100 Plus
srp-PE 731 CG3992-PE 1..731 1..746 3462 91.8 Plus
srp-PB 1249 CG3992-PB 519..1249 1..746 3462 91.8 Plus