BDGP Sequence Production Resources |
Search the DGRC for LD44495
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 444 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | spt4-RA |
Protein status: | LD44495.pep: gold |
Preliminary Size: | 2580 |
Sequenced Size: | 2316 |
Gene | Date | Evidence |
---|---|---|
CG12372 | 2001-01-01 | Release 2 assignment |
CG12372 | 2001-11-29 | Blastp of sequenced clone |
spt4 | 2008-04-29 | Release 5.5 accounting |
spt4 | 2008-08-15 | Release 5.9 accounting |
spt4 | 2008-12-18 | 5.12 accounting |
2316 bp (2316 high quality bases) assembled on 2001-11-29
GenBank Submission: AY075424
> LD44495.complete TGGCTTGGTTTTGCACGGATTTTGTATTTTTAGTTTTAAACCCATAATTG ATAAGTAAATATGGCCTTTGACGCGATACCCAAGGATCTGCGAGGACTTC GCGCCTGCCTCGTTTGCTCCCTAGTGAAGAGTTTTGATCAATTTGAGACT GATGGCTGTGAAAACTGCGAGGAGTTCCTGCGAATGAAAAACAACAAGGA CAATGTCTATGATCACACTAGCAACAACTTTGACGGAATTATTGCCCTAA CTACGCCCACCGACTCCTGGGTGGCCAAGTGGCAAAGATTGTCCCGCTTT ACTCGTGGTATCTATGCCATTTCTGTATCCGGAACACTGCCGCAGTCTAC CTTACGTGACATGAAGAATCGTGGAATTGTCTACAAATCTCGGGACAGAA GTCAACGATAAACAAACAGATTGCCGTACAAAATACATGTATAAATCTTT ATTCTTTAATTTATAACAAAACCACGAATACATACAATAGCAATACAAAA CGAAACCGCATCAGTCATCCAGCGAACTAACGCGCAATCCCTCGCCGCCG GCAGTCGTAACATGAACACCAAAACCCGCCGATTCGAGCTCCTCTTTAAG CTTCCAGTAGACCTCGTTGCACTCGTAGTTCTCTGGAAGCAGAACGATGA CATAGCCACCTGCGCCGGCGCCCGTCAGCTTTGAAAAGAAGCCACGCTTA AAAGCGATGGTGAAGATTTGCTCCAGTTTCGGGTGCGACACTCCGATAGC CTTCAACAGATCATTGTTGATCTGGAACAGGCGTTCAAGTTGCTCGAATT TCGAGCTATCGTCTTGGGCGTTGCCAAAGCTTTCGTAGAGTGGAACGGCG GCGGCAACAAGCTCCTCGCAAGCCTGCCAAATGGCCTCGATGAGCTGCGG AAAGGCATCTCCCAGATGACGAACCTTGGCCACAATGTCGGCGGTGCTGC GACTCACACGACTGTCCACCAGCAGGATGTTTAGTGGTTTCTGGATCTTC AGCGACTGGAAGCCCTGGCCCTTGACATACCGCAACATTCCGCCGTAGGT GCATACAGTGTTGTCCAGACCCGAGGGCGTGCCATGATTAACACGCTCCG ATTCATAAGCCCAGGACGAGATCAACGCCTGGTTTGCCTCCGACAAGTAG CTGTCTCTATCAAAGTGTCCGGCCAAAATGAGAAATGTCGTGGCCAAAGC TGCTCCGAAAGAGGCGGAACTGCCCAAACCCGCACCCACGGTTAGCTGGC TGTCTACCTGCACCTGGAAACCGGTTTGCAGCGTCAGTTTCTTGTCGCCG GGTGCGGAGAGTACAGCGCCGGCCAGCAAATAGTATATGGAGATGAATGC CCGCTGGGTGTGCTGCTTCGGTGCATTGCCTCCGGATCGTTCAAGTTGTT TGGACACCTCTGCGCGGACGGCTTCCAACAGATTGGCCGTGCTATCTGAT GGGTATTTACTCCTAAATTCAGCCAAAAATCCATTGAACTCCGGCAACTG GATCTCCAGTGTGCAGTTAAGGGCCTCCAGTTGAAAACTTGCCACCTGGC TGTCCTCCAGCTGCCGAAATCTCAGAGTAGTGCCCAAACCCACTACGGCG GCGAGGGCGGGACGATGATAGACCACGGCGTGTTCGCCATGGAGTATGAC CTTGCCCGGAGAATGGACCTGGAACTTGAGCATTGTTCTTGATGATCTCC GTGTATTGTGTGTTCTGTATTCCGTTTGGCTATGGCTTTATCGGTTTATC AGCTGTTTCGAATTGTAATGCTAATGCCTTTCGAGTGGACGACCTGCGAC AAGTAGTTAAACTTTTATGGCTGTATTTCTTTATGTAACTTATGCATTTA GTGGATCATTTGCGTTGTTTATTCGGTAACTCCTATTTCTGGCTGCCGAT TCCTGTGCTTTCCCTTTCACTTTCTTTGTGCGACTGGCGTTTTTCGGCTT GTTCGTCTCTTCGATCGGAAAGCGCAACCATCAGCAAAACGAACAACAGG TTTTTGCGGCTAGTGTTTGCTGTTGTTGTATCGCTCGTGTATATGTATGT GTGTTGTTGGTTTTTTTTTATTCGGTACTACTATTGGGCTTTCACTTTCT CCCACTCTTCGGGTGTGTAGGATTTCTGGGAGAATGCATGGATTTCTTTC AGTTCTTCGGCAAGCGTTGAGTTAACTAATCTATGCTTCTGGAGAAGGGT CTTGCCGCTGAAGGCTGGCGATACGATTACGGCGCTGAACTTGCCGCCAC AGCCGTCTGATTCGTCCGTAACACTCACGTACTCCGTCTGAATTAAAAAA AAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spt4-RA | 2430 | spt4-RA | 133..2422 | 1..2290 | 11450 | 100 | Plus |
CG33672-RA | 1999 | CG33672-RA | 129..1999 | 2290..420 | 9355 | 100 | Minus |
CG33671-RA | 1999 | CG33671-RA | 129..1999 | 2290..420 | 9355 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8521294..8523289 | 293..2290 | 9895 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 8521063..8521227 | 128..292 | 825 | 100 | Plus |
chr2R | 21145070 | chr2R | 8520875..8521003 | 1..129 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12634036..12636033 | 293..2290 | 9990 | 100 | Plus |
2R | 25286936 | 2R | 12633805..12633969 | 128..292 | 825 | 100 | Plus |
2R | 25286936 | 2R | 12633617..12633745 | 1..129 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12635235..12637232 | 293..2290 | 9990 | 100 | Plus |
2R | 25260384 | 2R | 12635004..12635168 | 128..292 | 825 | 100 | Plus |
2R | 25260384 | 2R | 12634816..12634944 | 1..129 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1412..1481 | 2078..2011 | 119 | 67.1 | Minus |
Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 490..572 | 378..463 | 116 | 62.8 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 491..573 | 378..463 | 116 | 62.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8520875..8521003 | 1..129 | 100 | -> | Plus |
chr2R | 8521065..8521227 | 130..292 | 100 | -> | Plus |
chr2R | 8521294..8523293 | 293..2294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..351 | 61..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..351 | 61..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..351 | 61..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..351 | 61..411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..2294 | 1..2294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..2294 | 1..2294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33672-RA | 104..1976 | 423..2294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
spt4-RA | 1..2294 | 1..2294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG33671-RA | 104..1976 | 423..2294 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12633807..12633969 | 130..292 | 100 | -> | Plus |
2R | 12634036..12636037 | 293..2294 | 99 | Plus | |
2R | 12633617..12633745 | 1..129 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12633807..12633969 | 130..292 | 100 | -> | Plus |
2R | 12634036..12636037 | 293..2294 | 99 | Plus | |
2R | 12633617..12633745 | 1..129 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12633807..12633969 | 130..292 | 100 | -> | Plus |
2R | 12634036..12636037 | 293..2294 | 99 | Plus | |
2R | 12633617..12633745 | 1..129 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8521122..8521250 | 1..129 | 100 | -> | Plus |
arm_2R | 8521312..8521474 | 130..292 | 100 | -> | Plus |
arm_2R | 8521541..8523542 | 293..2294 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12635235..12637236 | 293..2294 | 99 | Plus | |
2R | 12634816..12634944 | 1..129 | 100 | -> | Plus |
2R | 12635006..12635168 | 130..292 | 100 | -> | Plus |
Translation from 60 to 410
> LD44495.pep MAFDAIPKDLRGLRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVY DHTSNNFDGIIALTTPTDSWVAKWQRLSRFTRGIYAISVSGTLPQSTLRD MKNRGIVYKSRDRSQR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13399-PA | 116 | GF13399-PA | 1..116 | 1..116 | 597 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20325-PA | 116 | GG20325-PA | 1..116 | 1..116 | 610 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21192-PA | 116 | GH21192-PA | 1..116 | 1..116 | 598 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spt4-PA | 116 | CG12372-PA | 1..116 | 1..116 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20479-PA | 116 | GI20479-PA | 1..116 | 1..116 | 604 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10908-PA | 116 | GL10908-PA | 1..116 | 1..116 | 607 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11588-PA | 116 | GA11588-PA | 1..116 | 1..116 | 607 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21413-PA | 116 | GM21413-PA | 1..116 | 1..116 | 619 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10908-PA | 116 | GD10908-PA | 1..116 | 1..116 | 619 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22329-PA | 116 | GJ22329-PA | 1..116 | 1..116 | 603 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20849-PA | 116 | GK20849-PA | 1..116 | 1..116 | 612 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12484-PA | 116 | GE12484-PA | 1..116 | 1..116 | 620 | 99.1 | Plus |
Translation from 60 to 410
> LD44495.hyp MAFDAIPKDLRGLRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVY DHTSNNFDGIIALTTPTDSWVAKWQRLSRFTRGIYAISVSGTLPQSTLRD MKNRGIVYKSRDRSQR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
spt4-PA | 116 | CG12372-PA | 1..116 | 1..116 | 615 | 100 | Plus |