BDGP Sequence Production Resources |
Search the DGRC for LD44814
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 448 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11980-RB |
Protein status: | LD44814.pep: gold |
Preliminary Size: | 1415 |
Sequenced Size: | 1182 |
Gene | Date | Evidence |
---|---|---|
CG11980 | 2001-01-01 | Release 2 assignment |
CG11980 | 2002-06-14 | Blastp of sequenced clone |
CG11980 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11980 | 2008-04-29 | Release 5.5 accounting |
CG11980 | 2008-08-15 | Release 5.9 accounting |
CG11980 | 2008-12-18 | 5.12 accounting |
1182 bp (1182 high quality bases) assembled on 2002-06-14
GenBank Submission: AY128451
> LD44814.complete TCGCTAATGTTCCGATTGTTACCTCGTTTTCGAAAACTATCTATAATGAC TGGAGTTACCCCACCAAAACGCTCTCCCCTTTGGATCGGCACACACAGCG GCACTTTTCACTGCGACGAGTTGGTCGCATGTTTTATGCTCAAGCAATTG GATGAGTACAAAAACGCAGAGATTTTCCGCAGTCGGGACAACAAGGCTTT GAAGGAGAAGTGCGATATAATTGTCGACGTGGGCGGCGTTTATGATCATG CCAAGAAATTGTACGATCACCACCAAATAACCTTCAAGGAGACTTTTAGT TCCGTTCGCCCAGATGTAAGCGAGGACTACAACGTTGTCAGGCTAAGCAG TGCTGGACTGGTCTACTGTCACTATGGCGAGCGTGTTATACAGAGCATCC TGCAGCGCGAAAAGGGAATTAAACTCTCACCGGAAAACCTGCAAACGGCC TTTATTCAGATCTATAGGAATTTTATCAACGAACTGGACGCAATTGATAA TGGAGTGCCCATGTTCGAGGGCGTTGAGCCTATATACAAAATCTCCACTC ATCTATCTGCCCGCATTGCCAAACTGAATCCGTCCTGGCAGGAAACTGGC GTAGACATCGAAGACCGATTCAGACAGGCGATGGATACTGCAGGTCGTGA GTTTGTGGACAACGTTGTGGAGGTATCATGTTCCTGGATTCCAGCCCGGG ATCACGTACGAGAGGCTCTTAAAAATGCCAAGAACGTCCATCCCACCGGC GAGATTCTTGTGTTGAAGAATTTCTGCCCCTGGAAGTCTCATCTGTTCGA TCTTGAAAAGGAGTACAAGGTGGAGGGTGTGCCCAAGCTGGTCGTCTTCA ACAGCGGCAATAGTTGGCGAGTGGCCGGAGTTCCAGTGACGCCTGGCAGC TATCTGGGCCGCAAATTTCTGCCCACTCCTTGGCGCGGACTGATGGACGA TGAACTATGCGATAAGGCGAGCATCAAAGATCTCGAATTCATCCATCACA CAGGATTTATTGGCGGGGCAAAAACCGAGGAGGCTGCCATGTTGTTGGCC AAGAAATCCACCGAGTGGACAGAAGAGCAATAATATAATACGACTTAAAG TTATGCTTTTGAAATTGAAAAACAATAATTAGATCGCATTTAATTCTGGT GTTATTACGCATTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11980-RB | 1318 | CG11980-RB | 102..1267 | 1..1166 | 5830 | 100 | Plus |
CG11980-RC | 1239 | CG11980-RC | 56..1224 | 1..1166 | 5775 | 99.7 | Plus |
CG11980-RA | 1294 | CG11980-RA | 109..1243 | 32..1166 | 5675 | 100 | Plus |
CG11980-RA | 1294 | CG11980-RA | 12..43 | 1..32 | 160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4829939..4829969 | 1..31 | 100 | -> | Plus |
chr3R | 4830036..4830345 | 32..341 | 99 | -> | Plus |
chr3R | 4830403..4831225 | 342..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 1..1077 | 7..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 1..1077 | 7..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 1..1077 | 7..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 1..1077 | 7..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 1..1077 | 7..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 28..1191 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 28..1191 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 29..1192 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 28..1191 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11980-RB | 29..1192 | 1..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9004045..9004075 | 1..31 | 100 | -> | Plus |
3R | 9004142..9004451 | 32..341 | 100 | -> | Plus |
3R | 9004509..9005331 | 342..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9004045..9004075 | 1..31 | 100 | -> | Plus |
3R | 9004142..9004451 | 32..341 | 100 | -> | Plus |
3R | 9004509..9005331 | 342..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9004045..9004075 | 1..31 | 100 | -> | Plus |
3R | 9004142..9004451 | 32..341 | 100 | -> | Plus |
3R | 9004509..9005331 | 342..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4829767..4829797 | 1..31 | 100 | -> | Plus |
arm_3R | 4829864..4830173 | 32..341 | 100 | -> | Plus |
arm_3R | 4830231..4831053 | 342..1164 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8744973..8745282 | 32..341 | 100 | -> | Plus |
3R | 8745340..8746162 | 342..1164 | 100 | Plus | |
3R | 8744876..8744906 | 1..31 | 100 | -> | Plus |
Translation from 0 to 1082
> LD44814.hyp SLMFRLLPRFRKLSIMTGVTPPKRSPLWIGTHSGTFHCDELVACFMLKQL DEYKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLYDHHQITFKETFS SVRPDVSEDYNVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTA FIQIYRNFINELDAIDNGVPMFEGVEPIYKISTHLSARIAKLNPSWQETG VDIEDRFRQAMDTAGREFVDNVVEVSCSWIPARDHVREALKNAKNVHPTG EILVLKNFCPWKSHLFDLEKEYKVEGVPKLVVFNSGNSWRVAGVPVTPGS YLGRKFLPTPWRGLMDDELCDKASIKDLEFIHHTGFIGGAKTEEAAMLLA KKSTEWTEEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11980-PB | 358 | CG11980-PB | 1..358 | 3..360 | 1903 | 100 | Plus |
CG11980-PC | 359 | CG11980-PC | 1..359 | 3..360 | 1884 | 99.4 | Plus |
CG11980-PA | 345 | CG11980-PA | 1..345 | 16..360 | 1839 | 100 | Plus |
Translation from 6 to 1082
> LD44814.pep MFRLLPRFRKLSIMTGVTPPKRSPLWIGTHSGTFHCDELVACFMLKQLDE YKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLYDHHQITFKETFSSV RPDVSEDYNVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFI QIYRNFINELDAIDNGVPMFEGVEPIYKISTHLSARIAKLNPSWQETGVD IEDRFRQAMDTAGREFVDNVVEVSCSWIPARDHVREALKNAKNVHPTGEI LVLKNFCPWKSHLFDLEKEYKVEGVPKLVVFNSGNSWRVAGVPVTPGSYL GRKFLPTPWRGLMDDELCDKASIKDLEFIHHTGFIGGAKTEEAAMLLAKK STEWTEEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16574-PA | 359 | GF16574-PA | 6..359 | 4..357 | 1554 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14318-PA | 358 | GG14318-PA | 1..358 | 1..358 | 1666 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19378-PA | 352 | GH19378-PA | 11..352 | 16..357 | 1361 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11980-PB | 358 | CG11980-PB | 1..358 | 1..358 | 1903 | 100 | Plus |
CG11980-PC | 359 | CG11980-PC | 1..359 | 1..358 | 1884 | 99.4 | Plus |
CG11980-PA | 345 | CG11980-PA | 1..345 | 14..358 | 1839 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22581-PA | 349 | GI22581-PA | 10..349 | 18..357 | 1329 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12112-PA | 344 | GL12112-PA | 1..344 | 14..357 | 1388 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11307-PA | 344 | GA11307-PA | 1..344 | 14..357 | 1403 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23777-PA | 362 | GM23777-PA | 1..359 | 1..358 | 1784 | 92.2 | Plus |
Dsec\GM19272-PA | 172 | GM19272-PA | 1..169 | 190..358 | 846 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18587-PA | 362 | GD18587-PA | 1..357 | 1..356 | 1776 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10302-PA | 351 | GJ10302-PA | 10..348 | 19..357 | 1376 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11675-PA | 363 | GK11675-PA | 1..361 | 1..357 | 1377 | 71 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25920-PA | 358 | GE25920-PA | 1..358 | 1..358 | 1738 | 89.1 | Plus |