BDGP Sequence Production Resources |
Search the DGRC for LD44821
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 448 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | mtsh-RC |
Protein status: | LD44821.pep: gold |
Preliminary Size: | 2176 |
Sequenced Size: | 2539 |
Gene | Date | Evidence |
---|---|---|
CG7795 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7795 | 2002-05-18 | Blastp of sequenced clone |
CG7795 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7795 | 2008-04-29 | Release 5.5 accounting |
CG7795 | 2008-08-15 | Release 5.9 accounting |
CG7795 | 2008-12-18 | 5.12 accounting |
2539 bp (2539 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118966
> LD44821.complete AAACCCTAGGGAGCAGACGGTTCTTACTTTTAGCCAAATCTTCGTCGTCA GGGGATACCAACACCAGTCCGTGTAGTTGCCGCAGTGACTCGACAATCCA CACGTGTGATTTGGATAGGATAACCTTAAAATCGAGATACGAATTCTGAG CATTTCTGTTGTTTGCTTTCGCCAGTTTTTTTTTATTCAGTTTTAGAACC CAACTGCCAGGCAGGATCATGAACATCCCCATCTACCAAGTGCCCTCGGT GACCATGCAGTCGCTGCACCAGCAATCTTTGTACCAGCAAACCTATTTGG ATCGCAATCGCATGGTCACCGATGTATTTGTGCAGGAACACGTCTCGCAG AGCTCTTGGTCAATGGCCGGTTCATCGGCTGTTTTTATACCAGGCCCCAT TATAACTGGTAGTGCCCATGGACACTGCCATCATACCGCGACAGTTTCGA CTGTAAGTCCTCAATTAGCGACCTTTATGCCTTTTCCGGGCATGCAGTAC TATGCGGCAAGCTCAGCCACGATGAACGCCTATGGCCATAATCAGATGTA TTCTACTCGTGCTTCGGCCTCCGTCGGCTTCTATTTGCCACAGTACCATG CAAGCTGCAGTCATGAACAGCCGAAAAAGACGTTCTGTGCGGCTCAAACG CAGACCCAGCAGACGGCTAAGACCAGTTGCGATGTGGGCACCCAGGTGGA TTTGGATGCTGAAGAATTGCGCTCGGAGGCTAGGAAGCCAAGACCAGAAA GTGTTGTTCCTGAAGAATCGAGCATTAGTTCATTGGAAAGCGGCGCAGGC GATGGTTTCCGAGTGCAAAAAAAGCTGCGCAACTCGGAGGTAAAGCTGCT GGACCAGCGTCTCCATGATATTACCAGAGTTTCACTTCATGGCAGTGAGA TAGCCGAACGTCTGGCCAATGCCCATCGCAATCGTCCGTGCTTCAAGAAG ATCGATACACTGTGCGCCCGCCTGAAGCAGGATCTGCTGCGTCCGGATGG CGTGCTGCCAAATATAAACTCACAGGGCATTGCTTGGGCCGTTAAGGATT TCATATTCGTCTTTACGCGCATTGTGAATGCCTGGGTCATACTGAAGGGC TACGTGTATAATACTCCCGATGCTTTGAACAAGATTAAAGATGAGCTGCC GTCGGGCTTTATGGCTTCCTTTGATTCTTGGCAGATCTCAACCCTGTCCA TCGTAAAGATGATTGTAAAATCCTTTGTAAATCTGGATGAGCTGCTGCAG AAGCAGAAGAACAGCTTTTCCGGAAAAGATGGGGCTCCCATTAACCAAAG CAATAGCATCTCTCTAAGAAGTTTTATAGATAGCAACGATAGCAGCGGCT TGGCACAGAAGTACCTGGGAATGACCACTGGACATGGACCCAGTGCCTTT AGTACACCTAATAACCAAATACGTAATAATGCAGCCTCAAAAGGCCAAGA ACCCACTTCATCTGCACTTTACAAACCGAAATGTGCATTAAATCTAAACT ATCTGTACACCATGATAGAGGATTCGGAGGAAACCCAACGCCATGTAGAT GCCAATGGTACTTATCTGAAAACCGGAACGTATCAACCACTGCAAAAGGA GTCGATGCAACTGGAGATGCCGCCAGCCAAGCCAAATGACCATTATGTGG AGCGGAATGCTAACCAACAGGCTTTGCCATCTCAAGAGATTCCTAACGCT CCAACTCCGAAATCATCTCCACAGTCGGATCGTCCGCGAGATGTGAGGTC GTACACGAATCCATTTAGCGCGATCGGAAAAGAGGTTACCCGGCAGCTGT ACGAGTTCAGTGACCGTGTCATGGAGCTAAAAAACTTGGAGCGCTTCTTT AAGAAGCAGTTCACTCGCAACTATTATCCAAATTTCTATCAGCATTGCCA GGATGATTTTATAGACGTGCGTGCCATTATTTTGCGGTGCGAGAATTCCT CATACCATCACATTTATCAGGCTATCCATGATCTGCGCCGGATCATCTTT ACGGTGCGCTGTTATCTGCAGGTCAAGGAATAATGTATCCAATCCAAGAT GTACACGGACGAGAACCTCCTCTACTACATTGATCTCTACGAGCGCTCTG TGAACGACATGCTTTCCAAGCCGCCACATTATCCCAACCAGTTTGATCAC ATCATGGGCAGGCCAGGCGAAAAGCTCTTCAACTATGAAATCTAAGTGAA AAAGTATTGACGGTTGAGATTATCAACTGAAATTTAAACGATTTATGCCA CTTATTTAGCATTTACACGCGTGGGTTGAGTAGATTCATTAATTTTCGAA ATCAGTGAATTGAGGCAAATTTTGACAAATCCATGCTTTAATGTTAATTG ACATTAAATCAGATTCATTAATACCATAACTCCCGTTCTTTGGTCGCAAC ATTTATTCAGCATGTAATTAATACAGGTCTTATATTTTATAATGTAGTAT TTATAACATAACGTTTTGTTTTTTGTACACATTGAACGGATTCAACTGCT TTGTTAAATTCACTAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7795-RC | 2540 | CG7795-RC | 27..2540 | 1..2514 | 12570 | 100 | Plus |
CG7795.a | 2116 | CG7795.a | 27..2074 | 1..2048 | 10240 | 100 | Plus |
CG7795-RD | 2620 | CG7795-RD | 60..2080 | 1..2021 | 10105 | 100 | Plus |
CG7795-RD | 2620 | CG7795-RD | 2079..2553 | 2047..2521 | 2360 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8316767..8317891 | 1874..750 | 5610 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 8318309..8318824 | 516..1 | 2565 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 8315819..8316286 | 2514..2047 | 2340 | 100 | Minus |
chr2L | 23010047 | chr2L | 8318006..8318242 | 751..515 | 1185 | 100 | Minus |
chr2L | 23010047 | chr2L | 8316562..8316710 | 2023..1875 | 745 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8317837..8318961 | 1874..750 | 5625 | 100 | Minus |
2L | 23513712 | 2L | 8319379..8319894 | 516..1 | 2580 | 100 | Minus |
2L | 23513712 | 2L | 8316882..8317356 | 2521..2047 | 2360 | 99.8 | Minus |
2L | 23513712 | 2L | 8319076..8319312 | 751..515 | 1185 | 100 | Minus |
2L | 23513712 | 2L | 8317632..8317780 | 2023..1875 | 745 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8317837..8318961 | 1874..750 | 5625 | 100 | Minus |
2L | 23513712 | 2L | 8319379..8319894 | 516..1 | 2580 | 100 | Minus |
2L | 23513712 | 2L | 8316882..8317356 | 2521..2047 | 2360 | 99.7 | Minus |
2L | 23513712 | 2L | 8319076..8319312 | 751..515 | 1185 | 100 | Minus |
2L | 23513712 | 2L | 8317632..8317780 | 2023..1875 | 745 | 100 | Minus |
2L | 23513712 | 2L | 8317524..8317552 | 2048..2020 | 145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8315819..8316284 | 2049..2514 | 100 | <- | Minus |
chr2L | 8316454..8316480 | 2022..2048 | 100 | <- | Minus |
chr2L | 8316564..8316710 | 1875..2021 | 100 | <- | Minus |
chr2L | 8316767..8317889 | 752..1874 | 99 | <- | Minus |
chr2L | 8318006..8318240 | 517..751 | 100 | <- | Minus |
chr2L | 8318309..8318824 | 1..516 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7795-RB | 1..1659 | 219..1877 | 99 | == | Plus |
CG7795-RB | 1660..1797 | 1896..2033 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtsh-RC | 1..1815 | 219..2033 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtsh-RC | 1..1815 | 219..2033 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7795-RB | 1660..1797 | 1896..2033 | 100 | Plus | |
CG7795-RB | 1..1659 | 219..1877 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtsh-RC | 1..1815 | 219..2033 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7795-RA | 2028..2495 | 2047..2514 | 100 | Plus | |
CG7795-RA | 27..1903 | 1..1877 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtsh-RC | 1..2514 | 1..2514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtsh-RC | 15..2528 | 1..2514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7795-RA | 27..1903 | 1..1877 | 99 | == | Plus |
CG7795-RA | 2028..2495 | 2047..2514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtsh-RC | 15..2528 | 1..2514 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8316889..8317354 | 2049..2514 | 100 | <- | Minus |
2L | 8317524..8317550 | 2022..2048 | 100 | <- | Minus |
2L | 8317634..8317780 | 1875..2021 | 100 | <- | Minus |
2L | 8317837..8318959 | 752..1874 | 100 | <- | Minus |
2L | 8319076..8319310 | 517..751 | 100 | <- | Minus |
2L | 8319379..8319894 | 1..516 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8316889..8317354 | 2049..2514 | 100 | <- | Minus |
2L | 8317524..8317550 | 2022..2048 | 100 | <- | Minus |
2L | 8317634..8317780 | 1875..2021 | 100 | <- | Minus |
2L | 8317837..8318959 | 752..1874 | 100 | <- | Minus |
2L | 8319076..8319310 | 517..751 | 100 | <- | Minus |
2L | 8319379..8319894 | 1..516 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8316889..8317354 | 2049..2514 | 100 | <- | Minus |
2L | 8317524..8317550 | 2022..2048 | 100 | <- | Minus |
2L | 8317634..8317780 | 1875..2021 | 100 | <- | Minus |
2L | 8317837..8318959 | 752..1874 | 100 | <- | Minus |
2L | 8319076..8319310 | 517..751 | 100 | <- | Minus |
2L | 8319379..8319894 | 1..516 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8319076..8319310 | 517..751 | 100 | <- | Minus |
arm_2L | 8316889..8317354 | 2049..2514 | 100 | <- | Minus |
arm_2L | 8317524..8317550 | 2022..2048 | 100 | <- | Minus |
arm_2L | 8317634..8317780 | 1875..2021 | 100 | <- | Minus |
arm_2L | 8317837..8318959 | 752..1874 | 100 | <- | Minus |
arm_2L | 8319379..8319894 | 1..516 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8316889..8317354 | 2049..2514 | 100 | <- | Minus |
2L | 8317524..8317550 | 2022..2048 | 100 | <- | Minus |
2L | 8317634..8317780 | 1875..2021 | 100 | <- | Minus |
2L | 8317837..8318959 | 752..1874 | 100 | <- | Minus |
2L | 8319076..8319310 | 517..751 | 100 | <- | Minus |
2L | 8319379..8319894 | 1..516 | 100 | Minus |
Translation from 218 to 2032
> LD44821.pep MNIPIYQVPSVTMQSLHQQSLYQQTYLDRNRMVTDVFVQEHVSQSSWSMA GSSAVFIPGPIITGSAHGHCHHTATVSTVSPQLATFMPFPGMQYYAASSA TMNAYGHNQMYSTRASASVGFYLPQYHASCSHEQPKKTFCAAQTQTQQTA KTSCDVGTQVDLDAEELRSEARKPRPESVVPEESSISSLESGAGDGFRVQ KKLRNSEVKLLDQRLHDITRVSLHGSEIAERLANAHRNRPCFKKIDTLCA RLKQDLLRPDGVLPNINSQGIAWAVKDFIFVFTRIVNAWVILKGYVYNTP DALNKIKDELPSGFMASFDSWQISTLSIVKMIVKSFVNLDELLQKQKNSF SGKDGAPINQSNSISLRSFIDSNDSSGLAQKYLGMTTGHGPSAFSTPNNQ IRNNAASKGQEPTSSALYKPKCALNLNYLYTMIEDSEETQRHVDANGTYL KTGTYQPLQKESMQLEMPPAKPNDHYVERNANQQALPSQEIPNAPTPKSS PQSDRPRDVRSYTNPFSAIGKEVTRQLYEFSDRVMELKNLERFFKKQFTR NYYPNFYQHCQDDFIDVRAIILRCENSSYHHIYQAIHDLRRIIFTVRCYL QVKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15264-PA | 661 | GF15264-PA | 1..614 | 1..602 | 1986 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23455-PA | 657 | GG23455-PA | 1..610 | 1..602 | 2595 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10176-PA | 663 | GH10176-PA | 6..613 | 2..596 | 984 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mtsh-PC | 604 | CG7795-PC | 1..604 | 1..604 | 3161 | 100 | Plus |
mtsh-PD | 649 | CG7795-PD | 1..602 | 1..602 | 3148 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14236-PA | 681 | GI14236-PA | 6..636 | 2..601 | 1399 | 51.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19382-PA | 822 | GL19382-PA | 1..447 | 1..461 | 683 | 39.1 | Plus |
Dper\GL19382-PA | 822 | GL19382-PA | 675..774 | 503..602 | 326 | 53 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20593-PA | 872 | GA20593-PA | 1..497 | 1..461 | 716 | 39.3 | Plus |
Dpse\GA20593-PA | 872 | GA20593-PA | 730..824 | 508..602 | 331 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13056-PA | 628 | GM13056-PA | 1..581 | 1..602 | 2704 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22420-PA | 635 | GD22420-PA | 1..588 | 1..602 | 2820 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20536-PA | 741 | GJ20536-PA | 442..692 | 379..597 | 513 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24232-PA | 662 | GK24232-PA | 4..614 | 3..601 | 1679 | 55.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11052-PA | 658 | GE11052-PA | 1..611 | 1..602 | 2532 | 79.2 | Plus |
Translation from 218 to 2032
> LD44821.hyp MNIPIYQVPSVTMQSLHQQSLYQQTYLDRNRMVTDVFVQEHVSQSSWSMA GSSAVFIPGPIITGSAHGHCHHTATVSTVSPQLATFMPFPGMQYYAASSA TMNAYGHNQMYSTRASASVGFYLPQYHASCSHEQPKKTFCAAQTQTQQTA KTSCDVGTQVDLDAEELRSEARKPRPESVVPEESSISSLESGAGDGFRVQ KKLRNSEVKLLDQRLHDITRVSLHGSEIAERLANAHRNRPCFKKIDTLCA RLKQDLLRPDGVLPNINSQGIAWAVKDFIFVFTRIVNAWVILKGYVYNTP DALNKIKDELPSGFMASFDSWQISTLSIVKMIVKSFVNLDELLQKQKNSF SGKDGAPINQSNSISLRSFIDSNDSSGLAQKYLGMTTGHGPSAFSTPNNQ IRNNAASKGQEPTSSALYKPKCALNLNYLYTMIEDSEETQRHVDANGTYL KTGTYQPLQKESMQLEMPPAKPNDHYVERNANQQALPSQEIPNAPTPKSS PQSDRPRDVRSYTNPFSAIGKEVTRQLYEFSDRVMELKNLERFFKKQFTR NYYPNFYQHCQDDFIDVRAIILRCENSSYHHIYQAIHDLRRIIFTVRCYL QVKE*