BDGP Sequence Production Resources |
Search the DGRC for LD44970
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 449 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | Sucb-RA |
Protein status: | LD44970.pep: gold |
Preliminary Size: | 1780 |
Sequenced Size: | 1576 |
Gene | Date | Evidence |
---|---|---|
CG10622 | 2001-01-01 | Release 2 assignment |
CG10622 | 2001-07-04 | Blastp of sequenced clone |
CG10622 | 2003-01-01 | Sim4 clustering to Release 3 |
Sucb | 2008-04-29 | Release 5.5 accounting |
Sucb | 2008-08-15 | Release 5.9 accounting |
Sucb | 2008-12-18 | 5.12 accounting |
1576 bp (1576 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051980
> LD44970.complete TTTCGGTTGTGTTTTTAAACTAAATTTACCGACAAAGTTACGAAAATAAA TTAATACCAAGTTAGCCAAGGTATTCAGTTACCACCGCAGATCAGCCAAG ATGTCGTTCCTACTGAAAGCAGTTACCACAGCCCGTCACATCGTTCATAA GGTTCCCGTGCGCAACCTGAATCTGCTGGAGTTCCAGAGCAAGGATCTCC TCCAGAAGTATGGAGTGGCCATACAGCAATTCAAGGTCTTGAATAACTCC AAGGCAGATGCCGAGGTCGTCAAGACTTTTGAGTGCCCGGAATACGTGGT GAAGGCGCAGATTCTCGCCGGTGGGCGTGGCAAGGGAACTTTCGACAACG GATTCAAAGGCGGCGTCCATATCACCACCAACAAGAGCGAGGTGCTTTCG CTTACCCAGCAGATGATTGGAAACCGACTGATAACGAAACAAACGCCCAA ATCGGGAATTTTGGTCAACAAGGTCATGGTGGCACGCAGTATCAACATCA CCCGCGAGACCTATCTCTGCATCTTGCTGGACCGCGAGCACAATGGACCC GTGCTGATTGCCTCACCTGCCGGTGGCATGGATATCGAGGCGGTGGCCGA GGAAACCCCTGAGAAAATTAAGACTGTTCCGCTAGACATTGGCAAGCCCA TACCGGAGTCGACGCTCTTGGAGGTGGCCAAGTTCTTGGAGTTCAAGGGA GACTCTGTAAAGCGTTGTGCTGAGGAAATTCAAAAACTCTATACTCTCTT CAAAGCTGTGGATGCCGTACAGATCGAGATCAACCCGCTGGCGGAGACGG ATAAGGGAGAAGTTATCTCCGTTGATGCTAAGCTCAACTTTGACGACAAT GCCCAGTTCCGTCAGAAGGATATTTTCTCCATGGACGTCACCGAGGAGGA ATCCGATCCCCGAGAAGTGGAGGCGGCCAAGTACAATCTGAACTACGTCG CCATGGATGGCAACATTGGCTGCTTGGTTAATGGTGCCGGCCTGGCCATG GCCACCATGGACATCATCAAGCTGAATGGAGGCGAGCCCGCCAACTTTTT GGACGTCGGCGGTGGCGTCAGGGAGGATCAGGTGGCCAAAGCCTTCGAGA TCCTCACTGCTGACCCGAAAGTCAAGGGAATCCTGGTCAATGTCTTTGGC GGCATTGTCAATTGTGCCACCATTGCCAATGGCATTGTGGCTGCATCCAA AAAGCTGCAACTGAATGTTCCACTGGTTGTGCGACTGGAGGGCACCAATG TAAATCAGGCTCGCGAGATCCTGAAGAATTCGGGCCTGCCCATTCAGACA GCCAGTGACTTGGATGATGCCGCCCACAAGGCTGTGGCAGCCCTTAATTA GGGGAACGATTGAGGAGAGCATGTCTTCCAGAATGAAACGACGCTCATTA GCATTTACAACGGTTGGGCCTTTTAAGTATAAGTTTTTATCGACAATATA ACCAAAATATGTTATATTCTATATAAAAAGCTTTTTATTTGATTTAAGAA GTACCTTAGCCATCTATCAAAAATTAATTAAATTTAAAATCATTTATTTC TTAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sucb-RA | 1595 | Sucb-RA | 42..1595 | 1..1554 | 7770 | 100 | Plus |
Sucb.c | 1003 | Sucb.c | 42..1003 | 1..966 | 4745 | 99.5 | Plus |
Sucb.b | 1220 | Sucb.b | 632..1220 | 378..966 | 2930 | 99.8 | Plus |
Sucb.b | 1220 | Sucb.b | 42..422 | 1..381 | 1905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 5554291..5555465 | 1552..378 | 5860 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 5556080..5556233 | 154..1 | 770 | 100 | Minus |
chr3L | 24539361 | chr3L | 5555856..5555987 | 281..150 | 660 | 100 | Minus |
chr3L | 24539361 | chr3L | 5555675..5555775 | 381..281 | 490 | 99 | Minus |
chr3R | 27901430 | chr3R | 4767435..4767586 | 914..1065 | 355 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 5561699..5562875 | 1554..378 | 5870 | 99.9 | Minus |
3L | 28110227 | 3L | 5563490..5563643 | 154..1 | 770 | 100 | Minus |
3L | 28110227 | 3L | 5563266..5563397 | 281..150 | 660 | 100 | Minus |
3L | 28110227 | 3L | 5563085..5563185 | 381..281 | 505 | 100 | Minus |
3R | 32079331 | 3R | 8941506..8941657 | 914..1065 | 355 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 5554799..5555975 | 1554..378 | 5870 | 99.9 | Minus |
3L | 28103327 | 3L | 5556590..5556743 | 154..1 | 770 | 100 | Minus |
3L | 28103327 | 3L | 5556366..5556497 | 281..150 | 660 | 100 | Minus |
3L | 28103327 | 3L | 5556185..5556285 | 381..281 | 505 | 100 | Minus |
3R | 31820162 | 3R | 8682337..8682488 | 914..1065 | 355 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 2365..2503 | 1421..1552 | 112 | 58.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 5554328..5555461 | 382..1515 | 100 | <- | Minus |
chr3L | 5555675..5555774 | 282..381 | 99 | <- | Minus |
chr3L | 5555856..5555985 | 152..281 | 100 | <- | Minus |
chr3L | 5556083..5556233 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 1..1251 | 101..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 1..1251 | 101..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 1..1251 | 101..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 1..1251 | 101..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 1..1251 | 101..1351 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 42..1593 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 42..1593 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 49..1600 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 42..1593 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sucb-RA | 49..1600 | 1..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5561701..5562871 | 382..1552 | 100 | <- | Minus |
3L | 5563085..5563184 | 282..381 | 100 | <- | Minus |
3L | 5563266..5563395 | 152..281 | 100 | <- | Minus |
3L | 5563493..5563643 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5561701..5562871 | 382..1552 | 100 | <- | Minus |
3L | 5563085..5563184 | 282..381 | 100 | <- | Minus |
3L | 5563266..5563395 | 152..281 | 100 | <- | Minus |
3L | 5563493..5563643 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5561701..5562871 | 382..1552 | 100 | <- | Minus |
3L | 5563085..5563184 | 282..381 | 100 | <- | Minus |
3L | 5563266..5563395 | 152..281 | 100 | <- | Minus |
3L | 5563493..5563643 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 5554801..5555971 | 382..1552 | 100 | <- | Minus |
arm_3L | 5556185..5556284 | 282..381 | 100 | <- | Minus |
arm_3L | 5556366..5556495 | 152..281 | 100 | <- | Minus |
arm_3L | 5556593..5556743 | 1..151 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 5554801..5555971 | 382..1552 | 100 | <- | Minus |
3L | 5556185..5556284 | 282..381 | 100 | <- | Minus |
3L | 5556366..5556495 | 152..281 | 100 | <- | Minus |
3L | 5556593..5556743 | 1..151 | 100 | Minus |
Translation from 100 to 1350
> LD44970.pep MSFLLKAVTTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNS KADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITTNKSEVLS LTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGP VLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKG DSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDN AQFRQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAM ATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFG GIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQT ASDLDDAAHKAVAALN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10458-PA | 416 | GF10458-PA | 1..416 | 1..416 | 2050 | 92.8 | Plus |
Dana\GF17693-PA | 513 | GF17693-PA | 35..426 | 20..412 | 970 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14126-PA | 416 | GG14126-PA | 1..416 | 1..416 | 2154 | 98.8 | Plus |
Dere\GG13653-PA | 505 | GG13653-PA | 35..426 | 20..412 | 980 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16246-PA | 420 | GH16246-PA | 1..409 | 1..404 | 1912 | 87.8 | Plus |
Dgri\GH23962-PA | 451 | GH23962-PA | 35..426 | 20..412 | 967 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ScsbetaG-PC | 416 | CG10622-PC | 1..416 | 1..416 | 2086 | 100 | Plus |
ScsbetaG-PA | 416 | CG10622-PA | 1..416 | 1..416 | 2086 | 100 | Plus |
ScsbetaA-PH | 451 | CG11963-PH | 35..426 | 20..412 | 962 | 50.8 | Plus |
ScsbetaA-PG | 451 | CG11963-PG | 35..426 | 20..412 | 962 | 50.8 | Plus |
ScsbetaA-PB | 502 | CG11963-PB | 35..426 | 20..412 | 962 | 50.8 | Plus |
ScsbetaA-PA | 502 | CG11963-PA | 35..426 | 20..412 | 962 | 50.8 | Plus |
ScsbetaA-PJ | 452 | CG11963-PJ | 35..427 | 20..412 | 955 | 50.9 | Plus |
ScsbetaA-PI | 452 | CG11963-PI | 35..427 | 20..412 | 955 | 50.9 | Plus |
ScsbetaA-PD | 503 | CG11963-PD | 35..427 | 20..412 | 955 | 50.9 | Plus |
ScsbetaA-PC | 503 | CG11963-PC | 35..427 | 20..412 | 955 | 50.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13181-PA | 420 | GI13181-PA | 1..420 | 1..415 | 1953 | 87.1 | Plus |
Dmoj\GI10056-PA | 451 | GI10056-PA | 35..426 | 20..412 | 994 | 51.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12039-PA | 422 | GL12039-PA | 1..422 | 1..416 | 1959 | 87.9 | Plus |
Dper\GL21555-PA | 474 | GL21555-PA | 20..426 | 10..412 | 999 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10444-PA | 422 | GA10444-PA | 1..422 | 1..416 | 1957 | 88.2 | Plus |
Dpse\GA26331-PA | 451 | GA26331-PA | 20..426 | 10..412 | 999 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13912-PA | 416 | GM13912-PA | 1..416 | 1..416 | 2147 | 98.3 | Plus |
Dsec\GM23771-PA | 502 | GM23771-PA | 35..426 | 20..412 | 975 | 50.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13190-PA | 416 | GD13190-PA | 1..416 | 1..416 | 2158 | 99 | Plus |
Dsim\GD18581-PA | 507 | GD18581-PA | 35..431 | 20..412 | 954 | 49.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11957-PA | 415 | GJ11957-PA | 1..415 | 1..415 | 1947 | 88.2 | Plus |
Dvir\GJ23792-PA | 451 | GJ23792-PA | 20..426 | 10..412 | 987 | 50.1 | Plus |
Translation from 100 to 1350
> LD44970.hyp MSFLLKAVTTARHIVHKVPVRNLNLLEFQSKDLLQKYGVAIQQFKVLNNS KADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITTNKSEVLS LTQQMIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGP VLIASPAGGMDIEAVAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKG DSVKRCAEEIQKLYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDN AQFRQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAM ATMDIIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFG GIVNCATIANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQT ASDLDDAAHKAVAALN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sucb-PC | 416 | CG10622-PC | 1..416 | 1..416 | 2086 | 100 | Plus |
Sucb-PA | 416 | CG10622-PA | 1..416 | 1..416 | 2086 | 100 | Plus |
skap-PH | 451 | CG11963-PH | 35..426 | 20..412 | 962 | 50.8 | Plus |
skap-PG | 451 | CG11963-PG | 35..426 | 20..412 | 962 | 50.8 | Plus |
skap-PB | 502 | CG11963-PB | 35..426 | 20..412 | 962 | 50.8 | Plus |