BDGP Sequence Production Resources |
Search the DGRC for LD45056
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 450 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | mio-RA |
Protein status: | LD45056.pep: gold |
Preliminary Size: | 2989 |
Sequenced Size: | 2918 |
Gene | Date | Evidence |
---|---|---|
CG7074 | 2001-01-01 | Release 2 assignment |
CG7074 | 2001-10-10 | Blastp of sequenced clone |
CG7074 | 2003-01-01 | Sim4 clustering to Release 3 |
mio | 2008-04-29 | Release 5.5 accounting |
mio | 2008-08-15 | Release 5.9 accounting |
mio | 2008-12-18 | 5.12 accounting |
2918 bp (2918 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061485
> LD45056.complete ACGCGACGCAATTTAGTCTGTAGTGAAAATTGTTTTTTTTTACATCGATG GAAAATCGGCCACGATGAGCGGCAATACACACGGACTCAGCTGGTTTCCA CATTTTCCCGACAAATTCGTATCCTGGGGCCAGGAAATCCATTTATACGA AGTGCGCCGCAAAGATGATCACAGCCAAAAAAGTCGCCTGCCTTATATAT CCGTGAACTACCTCGCCAACGAGTCGCGCTATCAATATGCCCGCTGCGTG GCCGCCTCCTACCACAGTGACCAGCCCATAATTGCAGTGGGTCTGGCGGA TGGCAAAGTCGGGATTTGCAACTTCCGGGACACCTACGACAGCAGCTGGG AGTACACACCGCGTCAGCAGCGCATGTGCACCTGCCTCGCCTGGAACGAG CTGGATGCCAATATCCTGGCCATTGGACACGATCGCCATCGAAATGACAC CTGCATCACCATCTGGGACATTGAGCGTGGAGTTCCCAAGGAGACGGCCA ACTTCTTCGGCGTCGGCGAGTCGGCCAACTCCATTTGCTGGGATCGAAAT CATCGCACGGTCATTGCGGGAATGAGCCAGAAGATGATAAAGCTGTTCGA TCTGAGGCAGAGTAACGCCACCTGTCAAAGCATTCAAACAAAGACAGTGC AGGGACTTTCCGTATCCCCCAATGGCAACTATCTCTGCAGCTATGTGGAC TCGGTGATCACTCTGTGGGATCCGCGAAATATCAAGAGTCCCCTCAGGCA GATTCAGTCCTCGAAAAACCATTTGCAGATCGCTTGGTGTCCGACCAGGA CAAGCCTGCTTTCCTCGCTGCAACGCGATTCCTCCTACATCACTCTCTAC GACATCCGGAGTGTGGACACGGACAATTCCGGAGAGATCTACCACGTAAA ACGACAGATTAGCCCCTTTCCGGCTAGATACCAGCACAGTGGAAAGTTTT CGTTTGTTAATTGCCTGTCGTGGCATTCGAGGGATTTCGAGAGAGCTCTG CTTTTGGCAGATGCGCTGAACATCCTGGACTTTCGACTGCCAGCCACCTT GCACACGGCGCACAGCAATCGCCGGAAATTGCCACTTCTGATGCAGCGTC CGCTCTACACACCCGCCTCGCCGACTTCCACTGCGGCCACGCCCACTCAG CAGCAGCCCACGAGCAGCTGCAGCACGAATAGCGGGAGTTCCCTGGACTT TAGCACTCCTGGTGGTTCGCCCTTCAATGTGGACCTGCTGAAACCGGAAC TCTTTGAGCTGGATCTGGTGGACGAGACGCGTCAGCGCGCTCTAGAGGAT TACGGCATCAAACCCGATAACAAGCGATTCGGCGAACTCCACTTGACACC GTATCTGCGAAATGTGTGGTCCACTTTGAACAATGTCTACAGCGAGGATC GACTGACGGGCTTAAAGGCCACTTTGGGCATTAACTTGGGACACACCTCG GAGGCCTTGATGGCCAGCTCCCGCATTGAATCTCAGGTGCTCCAGTGGCC AGAGGGCATCAACAACTCCAACAAACTGATATGCTACAGGAGTGAGCAGC GCGACCTGGCCCTCCAACTTTGCGGTTGGGCCTTTGAGCAGGAGCTGGAT CGCTTTATAGACCAGTTGTATGCAAACAAGGAGTACAGCCGGGCAGCCAT GATCTGCGTGTTCCACTTGAAAATTTTCCATGCCTGCAACATCCTATCGT CGGCGGCGGACAACATGAGGGATCCCAGCATGTACAGGATCACCGTCATC GCCTTGTCCAGTTTCAATGCAGATCGCTGCAGTTCCACGTGGCGGAATCA GCGATCCAGCGCCAACATGCAGATACACGATCCACACTTAAGGGCTGTCT TCTCCTTTCTAACGATGGAGAAGGACAATTTTGATGCAGTGCTCAAAGAG GAAGGCGTTTCGTTATCAGACCGCATGGCCTTCGCCTGCAAATATCTATC GGAGACCAAGCTGGCTGACTATGTTGCGCAGCAAATCCAGGCGGCCATAG ATGGTGGCGATCTAAATGGCTTGTTGCTCACTGGAGAGTCGCAGGACGGA ATCGATATACTGCAGTCCTATATGGACACCAGCTTCGATGTGCAGACGGT AGCCCTGGTGGCCATTAACTACTTCCGGCAAGAGCTTTTCGAGGACAAGC GCATCCAGTACTGGATCGCCAGCTACTTGGATCACCTCAATAGCTGGGGC TTGTGGGAGAAGCGGGCCGAGCTGGACATCAAGATCGAGAGCATCCGCCC ATCCTCCCGCAGTTCCCGCACCGTATTTCTGTCGTGCAACTTTTGCGGCA AGTCTGTGTCCAACGCCTTGCTGGACGAGCCGCGTCCACGGAGCACCACC ACCAGCACCAACAGGCTCTCCTCATGCCCCAGCTGCCGGAAACCCCTGCC CCGCTGCTCGCTCTGCCTAATGCACATGGGCACAATGGTGAACATGAGCA ATGGGGAGACCCCGACCACCACGCCCGACGTGCCCGGCTGGCAGACCAAG CCCTTCTCAAAGTGGTTTTCCTGGTGTCAGACCTGTCGCCACGGCGGACA CACCGAGCACATCATGCAGTGGTTCAAGCAAAATTCAGAGTGCCCCGTGT CGTCGTGCAACTGCCGCTGCTTCGACATGGACGGCACCAAGCCGAACACA TTGAGAGACATTTCCTAGCTGTCCGGAGCACCCACCATACACAGCCCTTA CTCGCCCAGGCCATATGCATATGCATTAAGTTGTTGATTTGTTCCAAACG CGTGCGCCTTAAACAAACTCAGAAGTGTTCATTGTACTTAGACAAGGGAT GTGCCCGTAGCATTAGTGTTTATGACCTACCAGCTTTTAGCTGCTCAATT GCATTTTATACTTACATTCAAATAAAGGGCTATAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mio-RA | 3030 | mio-RA | 102..2984 | 1..2883 | 14400 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2217901..2218832 | 609..1540 | 4630 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 2218885..2219443 | 1537..2095 | 2780 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 2219502..2219986 | 2094..2578 | 2425 | 100 | Plus |
chr2L | 23010047 | chr2L | 2220047..2220352 | 2578..2883 | 1515 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 2217557..2217808 | 357..608 | 1230 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 2217090..2217273 | 1..184 | 920 | 100 | Plus |
chr2L | 23010047 | chr2L | 2217325..2217498 | 183..356 | 855 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2218174..2219105 | 609..1540 | 4660 | 100 | Plus |
2L | 23513712 | 2L | 2219158..2219716 | 1537..2095 | 2795 | 100 | Plus |
2L | 23513712 | 2L | 2219775..2220259 | 2094..2578 | 2425 | 100 | Plus |
2L | 23513712 | 2L | 2220320..2220625 | 2578..2883 | 1515 | 99.7 | Plus |
2L | 23513712 | 2L | 2217830..2218081 | 357..608 | 1260 | 100 | Plus |
2L | 23513712 | 2L | 2217363..2217546 | 1..184 | 920 | 100 | Plus |
2L | 23513712 | 2L | 2217598..2217771 | 183..356 | 870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2218174..2219105 | 609..1540 | 4660 | 100 | Plus |
2L | 23513712 | 2L | 2219158..2219716 | 1537..2095 | 2795 | 100 | Plus |
2L | 23513712 | 2L | 2219775..2220259 | 2094..2578 | 2425 | 100 | Plus |
2L | 23513712 | 2L | 2220320..2220625 | 2578..2883 | 1515 | 99.6 | Plus |
2L | 23513712 | 2L | 2217830..2218081 | 357..608 | 1260 | 100 | Plus |
2L | 23513712 | 2L | 2217363..2217546 | 1..184 | 920 | 100 | Plus |
2L | 23513712 | 2L | 2217598..2217771 | 183..356 | 870 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2217090..2217271 | 1..182 | 100 | -> | Plus |
chr2L | 2217325..2217498 | 183..356 | 99 | -> | Plus |
chr2L | 2217557..2217808 | 357..608 | 99 | -> | Plus |
chr2L | 2217901..2218831 | 609..1539 | 99 | -> | Plus |
chr2L | 2218888..2219443 | 1540..2095 | 99 | -> | Plus |
chr2L | 2219504..2219985 | 2096..2577 | 100 | -> | Plus |
chr2L | 2220047..2220352 | 2578..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2604 | 65..2668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2604 | 65..2668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2604 | 65..2668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2604 | 65..2668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2604 | 65..2668 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2883 | 1..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2883 | 1..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 74..2956 | 1..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 1..2883 | 1..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mio-RA | 74..2956 | 1..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2217363..2217544 | 1..182 | 100 | -> | Plus |
2L | 2217598..2217771 | 183..356 | 100 | -> | Plus |
2L | 2217830..2218081 | 357..608 | 100 | -> | Plus |
2L | 2218174..2219104 | 609..1539 | 100 | -> | Plus |
2L | 2219161..2219716 | 1540..2095 | 100 | -> | Plus |
2L | 2219777..2220258 | 2096..2577 | 100 | -> | Plus |
2L | 2220320..2220625 | 2578..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2217363..2217544 | 1..182 | 100 | -> | Plus |
2L | 2217598..2217771 | 183..356 | 100 | -> | Plus |
2L | 2217830..2218081 | 357..608 | 100 | -> | Plus |
2L | 2218174..2219104 | 609..1539 | 100 | -> | Plus |
2L | 2219161..2219716 | 1540..2095 | 100 | -> | Plus |
2L | 2219777..2220258 | 2096..2577 | 100 | -> | Plus |
2L | 2220320..2220625 | 2578..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2217363..2217544 | 1..182 | 100 | -> | Plus |
2L | 2217598..2217771 | 183..356 | 100 | -> | Plus |
2L | 2217830..2218081 | 357..608 | 100 | -> | Plus |
2L | 2218174..2219104 | 609..1539 | 100 | -> | Plus |
2L | 2219161..2219716 | 1540..2095 | 100 | -> | Plus |
2L | 2219777..2220258 | 2096..2577 | 100 | -> | Plus |
2L | 2220320..2220625 | 2578..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2217830..2218081 | 357..608 | 100 | -> | Plus |
arm_2L | 2218174..2219104 | 609..1539 | 100 | -> | Plus |
arm_2L | 2217363..2217544 | 1..182 | 100 | -> | Plus |
arm_2L | 2217598..2217771 | 183..356 | 100 | -> | Plus |
arm_2L | 2219161..2219716 | 1540..2095 | 100 | -> | Plus |
arm_2L | 2219777..2220258 | 2096..2577 | 100 | -> | Plus |
arm_2L | 2220320..2220625 | 2578..2883 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2217830..2218081 | 357..608 | 100 | -> | Plus |
2L | 2218174..2219104 | 609..1539 | 100 | -> | Plus |
2L | 2219161..2219716 | 1540..2095 | 100 | -> | Plus |
2L | 2219777..2220258 | 2096..2577 | 100 | -> | Plus |
2L | 2220320..2220625 | 2578..2883 | 99 | Plus | |
2L | 2217363..2217544 | 1..182 | 100 | -> | Plus |
2L | 2217598..2217771 | 183..356 | 100 | -> | Plus |
Translation from 64 to 2667
> LD45056.pep MSGNTHGLSWFPHFPDKFVSWGQEIHLYEVRRKDDHSQKSRLPYISVNYL ANESRYQYARCVAASYHSDQPIIAVGLADGKVGICNFRDTYDSSWEYTPR QQRMCTCLAWNELDANILAIGHDRHRNDTCITIWDIERGVPKETANFFGV GESANSICWDRNHRTVIAGMSQKMIKLFDLRQSNATCQSIQTKTVQGLSV SPNGNYLCSYVDSVITLWDPRNIKSPLRQIQSSKNHLQIAWCPTRTSLLS SLQRDSSYITLYDIRSVDTDNSGEIYHVKRQISPFPARYQHSGKFSFVNC LSWHSRDFERALLLADALNILDFRLPATLHTAHSNRRKLPLLMQRPLYTP ASPTSTAATPTQQQPTSSCSTNSGSSLDFSTPGGSPFNVDLLKPELFELD LVDETRQRALEDYGIKPDNKRFGELHLTPYLRNVWSTLNNVYSEDRLTGL KATLGINLGHTSEALMASSRIESQVLQWPEGINNSNKLICYRSEQRDLAL QLCGWAFEQELDRFIDQLYANKEYSRAAMICVFHLKIFHACNILSSAADN MRDPSMYRITVIALSSFNADRCSSTWRNQRSSANMQIHDPHLRAVFSFLT MEKDNFDAVLKEEGVSLSDRMAFACKYLSETKLADYVAQQIQAAIDGGDL NGLLLTGESQDGIDILQSYMDTSFDVQTVALVAINYFRQELFEDKRIQYW IASYLDHLNSWGLWEKRAELDIKIESIRPSSRSSRTVFLSCNFCGKSVSN ALLDEPRPRSTTTSTNRLSSCPSCRKPLPRCSLCLMHMGTMVNMSNGETP TTTPDVPGWQTKPFSKWFSWCQTCRHGGHTEHIMQWFKQNSECPVSSCNC RCFDMDGTKPNTLRDIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14608-PA | 868 | GF14608-PA | 1..868 | 1..867 | 4326 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24837-PA | 867 | GG24837-PA | 1..867 | 1..867 | 4588 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13084-PA | 883 | GH13084-PA | 1..883 | 1..867 | 3813 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mio-PA | 867 | CG7074-PA | 1..867 | 1..867 | 4645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21560-PA | 866 | GI21560-PA | 1..866 | 1..867 | 3799 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18708-PA | 870 | GL18708-PA | 1..870 | 1..867 | 4066 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20081-PA | 870 | GA20081-PA | 1..870 | 1..867 | 4066 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18321-PA | 867 | GM18321-PA | 1..867 | 1..867 | 4686 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23137-PA | 867 | GD23137-PA | 1..867 | 1..867 | 4693 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17489-PA | 865 | GJ17489-PA | 1..865 | 1..867 | 3817 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15144-PA | 897 | GK15144-PA | 1..701 | 1..697 | 2926 | 78.9 | Plus |
Dwil\GK15143-PA | 727 | GK15143-PA | 1..695 | 1..691 | 2918 | 79.2 | Plus |
Dwil\GK15144-PA | 897 | GK15144-PA | 852..897 | 822..867 | 266 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18029-PA | 866 | GE18029-PA | 1..866 | 1..867 | 4616 | 98.2 | Plus |
Translation from 64 to 2667
> LD45056.hyp MSGNTHGLSWFPHFPDKFVSWGQEIHLYEVRRKDDHSQKSRLPYISVNYL ANESRYQYARCVAASYHSDQPIIAVGLADGKVGICNFRDTYDSSWEYTPR QQRMCTCLAWNELDANILAIGHDRHRNDTCITIWDIERGVPKETANFFGV GESANSICWDRNHRTVIAGMSQKMIKLFDLRQSNATCQSIQTKTVQGLSV SPNGNYLCSYVDSVITLWDPRNIKSPLRQIQSSKNHLQIAWCPTRTSLLS SLQRDSSYITLYDIRSVDTDNSGEIYHVKRQISPFPARYQHSGKFSFVNC LSWHSRDFERALLLADALNILDFRLPATLHTAHSNRRKLPLLMQRPLYTP ASPTSTAATPTQQQPTSSCSTNSGSSLDFSTPGGSPFNVDLLKPELFELD LVDETRQRALEDYGIKPDNKRFGELHLTPYLRNVWSTLNNVYSEDRLTGL KATLGINLGHTSEALMASSRIESQVLQWPEGINNSNKLICYRSEQRDLAL QLCGWAFEQELDRFIDQLYANKEYSRAAMICVFHLKIFHACNILSSAADN MRDPSMYRITVIALSSFNADRCSSTWRNQRSSANMQIHDPHLRAVFSFLT MEKDNFDAVLKEEGVSLSDRMAFACKYLSETKLADYVAQQIQAAIDGGDL NGLLLTGESQDGIDILQSYMDTSFDVQTVALVAINYFRQELFEDKRIQYW IASYLDHLNSWGLWEKRAELDIKIESIRPSSRSSRTVFLSCNFCGKSVSN ALLDEPRPRSTTTSTNRLSSCPSCRKPLPRCSLCLMHMGTMVNMSNGETP TTTPDVPGWQTKPFSKWFSWCQTCRHGGHTEHIMQWFKQNSECPVSSCNC RCFDMDGTKPNTLRDIS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mio-PA | 867 | CG7074-PA | 1..867 | 1..867 | 4645 | 100 | Plus |