Clone LD45081 Report

Search the DGRC for LD45081

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:450
Well:81
Vector:pOT2
Associated Gene/TranscriptSu(var)3-3-RA
Protein status:LD45081.pep: gold
Preliminary Size:4199
Sequenced Size:3670

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17149 2001-01-01 Release 2 assignment
CG17149 2002-03-19 Blastp of sequenced clone
CG17149 2003-01-01 Sim4 clustering to Release 3
Hdm 2008-04-29 Release 5.5 accounting
Hdm 2008-08-15 Release 5.9 accounting
Hdm 2008-12-18 5.12 accounting

Clone Sequence Records

LD45081.complete Sequence

3670 bp (3670 high quality bases) assembled on 2002-03-19

GenBank Submission: AY094837

> LD45081.complete
CCAGAACGGTATAAACAATTTTTATATTTTGCACTTTTAAATGTCGGAAA
ATCAATCTGTGAGCCAACCTAATATGAAAAGCGACGCATGGATCAGCTGA
TACAGCATTTGATAATAATACTTCATTGTCATCAGAGAAGCAGGGAGTTT
AGACCAAAAAAAAAAACTACACCCGCAGTCCGATCCTCAAAACGTGTGAT
AATAAAATCACGGAACAATCAGAAAAATATCGAAAGAATAATGCGGCAAT
ATTCCGGTTTGGTGGACTAAAGAATTCGTGATTTTCGAACGTGAGCTAGC
TTTATTGGAATTGGAAATGAGTTCGAGAAAAATTTAAACGGGTTCCACTT
TTGAAGGGCCAACTTTTCAGTGTCCCGGTGGCAGTTCCATAATCCGGAGA
TGAAACCCACCCAGTTCGGAGGCAGTAGCTCCAAGATGACCGAGCCAATT
GAGTATGTGACGCTAATTAGCGACGATTCCGATGGTGAGCCCACGCCCAA
AAGAAACGTCAATCACCCGCCGTCGGCATTGTCAGCACCCAATCCTGGTC
AGAAACAAAAGCACCCGGATGAGGACTCAAATGACGCACCTGCCACCAGC
GATGAGCGACGCACAAGTAGGCGCAATCGGCCAAAAGTGGATTATAGTAA
CAGGCCTAGTGGAAGTGGAGACACCGCCTCCAATGACAAGTCAGGATCGG
CATCCATGGGACCTAACAACCAGCAAGCAGAGCGTCGCAGCCAAAGCCAA
ACCCGCAAGTCAGAAGCCAATGCTACCTCCTCCTCCGTGTCCGGACCCAG
TGCCGGAAATTCCAGACCGTCCCAGAACGGAGATTCCAAGGACCGGGATG
CCGGCACGCCCACGGTTTTGTCTGGCCAAGAGGGCGCCGTCTTCCAATCT
CGCCTGCCATTTAACAAAATGACACCCAACGAAGAGGCCTGCTTTCCGGA
CATCAGTCGCTCGGGCATTCTCGGCCATCGGGTATTCCTCAACATTCGTA
ACAGCCTCTTGCACATGTGGGTGGACAATCCCAAGATCCAGCTGAGCTTC
GAGATCGCCCTGAAGAACCTGCCGCCGCCATTCGACAGCGAGCCCAGTTT
GGTAAGGCGAGTACACTCGTTTCTGGAGCGTCATGGCTTCATTAACTTCG
GCATCTTTAAGCGACTTAAGCCTATACCCGCCAAAAAGCTGGGCAAAGTC
ATAGTGATTGGGGCAGGGATCTCCGGCTTAGCAGTGGCACACCAGTTGCA
GCAGTTCGGCATGGATGTGATCGTCTTGGAAGCGCGGGATCGGGTAGGGG
GACGGATATCTACGTTTCGGAAGAACAGCTATATTGCCGATGTGGGAGCA
ATGGTGGTTACCGGCGTCTATGGCAATCCAATGACGATCCTCAGCAAGCA
GATCGGTATGGACCTAGTTCCCATCCAGCAGACATGTCCACTTTACGGCC
CAGATGGAAAGCCCGTGCCCAAGGAGAAGGATGACGTGATCGAGAGAGAA
TTTAACCGACTGCTGGAATCAGCCAGCTACCTGTCCCACCGCCTTGATTT
TAACTACGCCGGCGATTGCCCAGTTTCGCTGGGCGATGCCTTGGAGTGGA
TAATCAGTATGCAGGAGATGCAGGTGATGCACAAACGGGGGCAGCACATG
CAGGAGATCATAGCCACCCAAACGAAGATCATTGAACAGCGTCGTCGACT
GAAAACCCTTAGAGATACCATCGGCAAACTAAAGAATGAGCACTTGGCAA
TGATCAACCAGCGGAAACCCAAAGGCACGGATGGCGATCTGAAATACTGT
TACCAAGAGTTTAACATTCGGAACACCCAGATCAAAATGGAGGAAACGAT
CAGTACGTTTCACGATCTCCATGCCGAGGAAAAGCAGATGTTAGCCAAAC
TCCACGAACTGGAGCAGAACCGACCTAGCGATGTGTACCTCTCGTCCCGC
GACCGCCTGATCTTGGACTGGCATTTTGCCAACTTGGAATTTGCTAATGC
CACCCGACTAAATAACCTGTCGTTGAAGCACTGGGATCAGGACGATGACT
TCGAGTTTATTGGCCACCACACAACTGTGCGGAACGGTTATTCATGTGTG
CCTGTAGCTCTTACTGAAAACCTGGACATCCGTGTCAATAGCGCCGTCAA
GGAGATAAAGTACGGCACCAAAGGTGTGGAAGTAGTGGCTGAAAACTTGA
AGACATCCAATTCGCAGATGACATACAAGGCAGACCTTGTCGTCTGCACA
CTTACTCTGGGCGTCCTCAAAGTGGCGGTAGCACATAAGGAGTCACAGCA
GAGTAACACAGTCAAGTTCGACCCGCCATTGCCGGACTGGAAACAGCAGG
CCATCAAAAGGCTGGGATTTGGGAATCTCAATAAGGTTGTGCTCTGCTTC
GATCGCATTTTTTGGGATCCCAACGCTAATCTCTTCGGACACGTGGGCAG
CACGACGGCGAGTAGAGGAGAAATGTTTCTGTTCTGGAGTATAAGCTCAT
CTCCGGTGTTGCTCGCTCTAGTCGCCGGAATGGCAGCGAATCTGGTGGAG
AGCGTGACGGATGACATCATAATCGGGCGTTGTATGTCGGTGCTAAAAAA
CATCTTCGGGAATACCTCTGTTCCACAACCCAAGGAAACAGTGGTAACGC
GTTGGCGCAGCGATCCCTGGGCCCGTGGGTCGTACAGCTACGTATCCGTT
GGTTCCTCGGGCAGTGACTACGATCTGCTGGCGGCGCCGGTCATTCCGCC
GTCCAGTAAGGATGCGGAAGGATTGCCACGGCTATTCTTCGCGGGTGAGC
ATACGATACGGAATTATCCGGCCACTGTGCATGGAGCGTACTTGAGCGGA
TTGCGCGAGGCGGGACGTATTGCGGATTACTATCTCGGCTATCCAGAGGG
AACACCGCCGGACATTGGCTACTCGGTGGCTGAGGCGGCCAATCTGGTGT
CCGTGGGAAATGTTGTCAAGCTGCGCGACCTCTCGCCCAATCTATCTGAC
TCCTCCCCGTCGTCAAAGAAGTCGGAGGAGAATTCAAACTCAAACACTGC
CGACTCTACGGAGCTACAGTAACAATGTATTTAGCGTGATGGATTTGGTC
CCCAGCAGTTACTCCTAGAGCGTTTAGTTTTGTATCATACAACTGGGGCT
CGCTGTTTAAAACGAAGCTAGGCCGCTGTAAATACCTAAGACTATTCAAC
TAAGCATAGACCACTTTCATTCAACCAATTATAAATTAAGATAAAAAGCA
ATAACACCCAACAAAGCAAATCCTCTTCAGTGTTTCCTTCAGATCAAAGT
AAACCAACCTCTGTGCGCCTATAATTGATCAACAAATGCAATCATCTATC
ATAACTTTCCGTACCACTTACCCGCCAATGAGGAGTATATCTTTTAAGTA
TATTATCGCCTATAAGATTGTTTTCAATAAGTATTTTGTAAATTAAATTT
GAAAATAGTAAATTAAATTGACGCCGATATTTTTAATTAGGTTAATTTAA
TTTAAGTACAAATTTCATATTACTTCCAACTTAAAAACACTTTCAATTTT
TTTAATATCTTATTGTTATCTTGATAAAATACGATGTAGAAAAATGTGTA
CGCAAATCATGGCATAAATTGAGTTTTAAAATATAATGTAAGCTTAAAAA
AAAAAAAAAAAAAAAAAAAA

LD45081.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:20:47
Subject Length Description Subject Range Query Range Score Percent Strand
Su(var)3-3-RA 3686 Su(var)3-3-RA 41..3686 1..3646 18230 100 Plus
Su(var)3-3-RB 3620 Su(var)3-3-RB 323..3620 349..3646 16460 99.9 Plus
Su(var)3-3.a 3521 Su(var)3-3.a 1036..3521 1161..3646 12430 100 Plus
Su(var)3-3.a 3521 Su(var)3-3.a 284..1036 349..1101 3735 99.7 Plus
Su(var)3-3-RB 3620 Su(var)3-3-RB 41..331 1..291 1455 100 Plus
Su(var)3-3.a 3521 Su(var)3-3.a 2..292 1..291 1455 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20215588..20217515 1..1928 9640 100 Plus
chr3L 24539361 chr3L 20218242..20219421 2466..3645 5885 99.9 Plus
chr3L 24539361 chr3L 20217586..20218127 1927..2468 2710 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:40:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20226417..20228344 1..1928 9640 100 Plus
3L 28110227 3L 20229071..20230252 2466..3647 5910 100 Plus
3L 28110227 3L 20228415..20228956 1927..2468 2710 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20219517..20221444 1..1928 9640 100 Plus
3L 28103327 3L 20222171..20223352 2466..3647 5910 100 Plus
3L 28103327 3L 20221515..20222056 1927..2468 2710 100 Plus
Blast to na_te.dros performed 2019-03-15 13:52:24
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 845..1027 3567..3385 150 55.1 Minus
gypsy10 6006 gypsy10 GYPSY10 6006bp 718..850 3529..3399 147 59 Minus
hobo 2959 hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). 2370..2532 3384..3548 118 55.1 Plus

LD45081.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:53:06 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20215588..20217515 1..1928 100 -> Plus
chr3L 20217588..20218126 1929..2467 100 -> Plus
chr3L 20218244..20219421 2468..3645 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:28:19 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Hdm-RB 1..2673 400..3072 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:27:37 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)3-3-RB 1..2673 400..3072 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:14:55 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)3-3-RA 1..2673 400..3072 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:02:26 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Hdm-RB 1..2673 400..3072 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:43:00 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)3-3-RA 1..2673 400..3072 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:54:13 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Hdm-RA 1..3645 1..3645 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:27:37 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)3-3-RA 1..3645 1..3645 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:14:55 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)3-3-RA 37..3681 1..3645 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:02:26 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Hdm-RA 1..3645 1..3645 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:43:00 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
Su(var)3-3-RA 37..3681 1..3645 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:53:06 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20226417..20228344 1..1928 100 -> Plus
3L 20228417..20228955 1929..2467 100 -> Plus
3L 20229073..20230250 2468..3645 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:53:06 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20226417..20228344 1..1928 100 -> Plus
3L 20228417..20228955 1929..2467 100 -> Plus
3L 20229073..20230250 2468..3645 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:53:06 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20226417..20228344 1..1928 100 -> Plus
3L 20228417..20228955 1929..2467 100 -> Plus
3L 20229073..20230250 2468..3645 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:14:55 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20219517..20221444 1..1928 100 -> Plus
arm_3L 20221517..20222055 1929..2467 100 -> Plus
arm_3L 20222173..20223350 2468..3645 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:35:43 Download gff for LD45081.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20219517..20221444 1..1928 100 -> Plus
3L 20221517..20222055 1929..2467 100 -> Plus
3L 20222173..20223350 2468..3645 100   Plus

LD45081.pep Sequence

Translation from 399 to 3071

> LD45081.pep
MKPTQFGGSSSKMTEPIEYVTLISDDSDGEPTPKRNVNHPPSALSAPNPG
QKQKHPDEDSNDAPATSDERRTSRRNRPKVDYSNRPSGSGDTASNDKSGS
ASMGPNNQQAERRSQSQTRKSEANATSSSVSGPSAGNSRPSQNGDSKDRD
AGTPTVLSGQEGAVFQSRLPFNKMTPNEEACFPDISRSGILGHRVFLNIR
NSLLHMWVDNPKIQLSFEIALKNLPPPFDSEPSLVRRVHSFLERHGFINF
GIFKRLKPIPAKKLGKVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVG
GRISTFRKNSYIADVGAMVVTGVYGNPMTILSKQIGMDLVPIQQTCPLYG
PDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGDCPVSLGDALEW
IISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLA
MINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAK
LHELEQNRPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDD
FEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENL
KTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQ
AIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISS
SPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVT
RWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGE
HTIRNYPATVHGAYLSGLREAGRIADYYLGYPEGTPPDIGYSVAEAANLV
SVGNVVKLRDLSPNLSDSSPSSKKSEENSNSNTADSTELQ*

LD45081.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:01:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25315-PA 895 GF25315-PA 1..895 1..890 3912 84.3 Plus
Dana\GF18451-PA 594 GF18451-PA 344..559 608..817 300 32.2 Plus
Dana\GF23894-PA 478 GF23894-PA 229..477 577..833 261 31.8 Plus
Dana\GF12528-PA 509 GF12528-PA 262..496 611..828 257 31.4 Plus
Dana\GF10138-PA 472 GF10138-PA 221..468 579..828 228 30.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:01:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16089-PA 889 GG16089-PA 1..889 1..890 4373 92.7 Plus
Dere\GG11620-PA 583 GG11620-PA 333..548 608..817 281 31.3 Plus
Dere\GG20170-PA 509 GG20170-PA 252..496 600..828 236 30.9 Plus
Dere\GG15789-PA 477 GG15789-PA 227..471 577..828 234 30.4 Plus
Dere\GG21160-PA 504 GG21160-PA 283..498 609..829 228 32.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16339-PA 896 GH16339-PA 1..896 1..890 3600 77.8 Plus
Dgri\GH17610-PA 608 GH17610-PA 359..580 608..829 298 32 Plus
Dgri\GH19936-PA 516 GH19936-PA 275..514 600..828 273 31.2 Plus
Dgri\GH13436-PA 520 GH13436-PA 256..514 571..828 246 30.8 Plus
Dgri\GH19935-PA 519 GH19935-PA 232..495 577..828 243 29.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
Su(var)3-3-PB 890 CG17149-PB 1..890 1..890 4629 100 Plus
Su(var)3-3-PA 890 CG17149-PA 1..890 1..890 4629 100 Plus
Su(var)3-3-PC 870 CG17149-PC 1..870 1..890 4491 97.8 Plus
CG8032-PB 583 CG8032-PB 334..548 609..817 284 31.4 Plus
CG8032-PA 583 CG8032-PA 334..548 609..817 284 31.4 Plus
CG6034-PA 479 CG6034-PA 248..475 600..830 226 32.4 Plus
CG7737-PA 509 CG7737-PA 252..496 600..828 221 30.1 Plus
CG7737-PB 543 CG7737-PB 286..530 600..828 221 30.1 Plus
CG10561-PA 504 CG10561-PA 283..498 609..829 216 32.3 Plus
CG7460-PC 486 CG7460-PC 235..479 577..828 192 29.5 Plus
CG7460-PB 486 CG7460-PB 235..479 577..828 192 29.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11530-PA 897 GI11530-PA 1..897 1..890 3618 78.3 Plus
Dmoj\GI22532-PA 594 GI22532-PA 345..566 608..829 313 32.6 Plus
Dmoj\GI19893-PA 452 GI19893-PA 183..438 577..828 262 31 Plus
Dmoj\GI19892-PA 508 GI19892-PA 230..497 577..828 253 29.9 Plus
Dmoj\GI13981-PA 524 GI13981-PA 297..518 609..828 239 32.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25121-PA 925 GL25121-PA 1..909 1..884 3773 80.1 Plus
Dper\GL23965-PA 596 GL23965-PA 344..567 608..829 289 30.9 Plus
Dper\GL19976-PA 508 GL19976-PA 262..495 611..828 247 31.1 Plus
Dper\GL11895-PA 472 GL11895-PA 242..468 599..828 234 32.8 Plus
Dper\GL21188-PA 479 GL21188-PA 274..473 633..828 177 29.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14350-PA 927 GA14350-PA 1..911 1..884 3771 79.9 Plus
Dpse\GA20779-PA 596 GA20779-PA 344..567 608..829 289 30.9 Plus
Dpse\GA20553-PA 508 GA20553-PA 262..495 611..828 247 31.1 Plus
Dpse\GA19035-PA 472 GA19035-PA 242..468 599..828 235 33.2 Plus
Dpse\GA10395-PA 510 GA10395-PA 290..504 609..828 232 31.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:01:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22263-PA 888 GM22263-PA 1..888 1..890 4714 98.4 Plus
Dsec\GM23747-PA 583 GM23747-PA 333..548 608..817 298 31.3 Plus
Dsec\GM24313-PA 479 GM24313-PA 248..475 600..830 258 33.2 Plus
Dsec\GM17327-PA 504 GM17327-PA 283..498 609..829 236 33.2 Plus
Dsec\GM21259-PA 509 GM21259-PA 207..496 563..828 230 28.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14861-PA 808 GD14861-PA 1..688 1..685 3475 94.9 Plus
Dsim\GD14861-PA 808 GD14861-PA 663..808 745..890 769 99.3 Plus
Dsim\GD18558-PA 583 GD18558-PA 333..548 608..817 293 31.3 Plus
Dsim\GD12383-PA 479 GD12383-PA 229..475 577..830 248 31.1 Plus
Dsim\GD10773-PA 509 GD10773-PA 207..496 563..828 231 29.2 Plus
Dsim\GD24185-PA 465 GD24185-PA 269..459 643..829 194 31.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:01:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11550-PA 900 GJ11550-PA 1..900 1..890 3626 78.7 Plus
Dvir\GJ10135-PA 587 GJ10135-PA 338..559 608..829 302 31.8 Plus
Dvir\GJ15062-PA 513 GJ15062-PA 278..509 609..828 272 32.4 Plus
Dvir\GJ15061-PA 505 GJ15061-PA 260..494 611..828 245 30.6 Plus
Dvir\GJ13090-PA 487 GJ13090-PA 236..480 577..828 235 31.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16943-PA 937 GK16943-PA 38..937 10..890 3571 77.4 Plus
Dwil\GK13216-PA 586 GK13216-PA 335..558 608..829 299 32.1 Plus
Dwil\GK19322-PA 501 GK19322-PA 260..497 611..837 272 33.3 Plus
Dwil\GK12329-PA 490 GK12329-PA 259..484 600..828 246 32.7 Plus
Dwil\GK12302-PA 486 GK12302-PA 264..479 611..828 234 31.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:01:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19651-PA 889 GE19651-PA 1..889 1..890 4415 93.8 Plus
Dyak\GE25891-PA 583 GE25891-PA 333..548 608..817 291 31.3 Plus
Dyak\GE12859-PA 509 GE12859-PA 252..496 600..828 236 30.9 Plus
Dyak\GE13233-PA 504 GE13233-PA 283..498 609..829 234 32.3 Plus
Dyak\GE22127-PA 477 GE22127-PA 246..473 600..830 230 30.3 Plus

LD45081.hyp Sequence

Translation from 399 to 3071

> LD45081.hyp
MKPTQFGGSSSKMTEPIEYVTLISDDSDGEPTPKRNVNHPPSALSAPNPG
QKQKHPDEDSNDAPATSDERRTSRRNRPKVDYSNRPSGSGDTASNDKSGS
ASMGPNNQQAERRSQSQTRKSEANATSSSVSGPSAGNSRPSQNGDSKDRD
AGTPTVLSGQEGAVFQSRLPFNKMTPNEEACFPDISRSGILGHRVFLNIR
NSLLHMWVDNPKIQLSFEIALKNLPPPFDSEPSLVRRVHSFLERHGFINF
GIFKRLKPIPAKKLGKVIVIGAGISGLAVAHQLQQFGMDVIVLEARDRVG
GRISTFRKNSYIADVGAMVVTGVYGNPMTILSKQIGMDLVPIQQTCPLYG
PDGKPVPKEKDDVIEREFNRLLESASYLSHRLDFNYAGDCPVSLGDALEW
IISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLA
MINQRKPKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAK
LHELEQNRPSDVYLSSRDRLILDWHFANLEFANATRLNNLSLKHWDQDDD
FEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKEIKYGTKGVEVVAENL
KTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQ
AIKRLGFGNLNKVVLCFDRIFWDPNANLFGHVGSTTASRGEMFLFWSISS
SPVLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVT
RWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGE
HTIRNYPATVHGAYLSGLREAGRIADYYLGYPEGTPPDIGYSVAEAANLV
SVGNVVKLRDLSPNLSDSSPSSKKSEENSNSNTADSTELQ*

LD45081.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
Su(var)3-3-PB 890 CG17149-PB 1..890 1..890 4629 100 Plus
Su(var)3-3-PA 890 CG17149-PA 1..890 1..890 4629 100 Plus
Su(var)3-3-PC 870 CG17149-PC 1..870 1..890 4491 97.8 Plus
CG8032-PB 583 CG8032-PB 334..548 609..817 284 31.4 Plus
CG8032-PA 583 CG8032-PA 334..548 609..817 284 31.4 Plus