BDGP Sequence Production Resources |
Search the DGRC for LD45115
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 451 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | Rcp-RA |
Protein status: | LD45115.pep: wuzgold |
Preliminary Size: | 1223 |
Sequenced Size: | 1069 |
Gene | Date | Evidence |
---|---|---|
CG4875 | 2001-01-01 | Release 2 assignment |
CG4875 | 2001-10-10 | Blastp of sequenced clone |
CG4875 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4875 | 2008-04-29 | Release 5.5 accounting |
CG4875 | 2008-08-15 | Release 5.9 accounting |
CG4875 | 2008-12-18 | 5.12 accounting |
1069 bp (1069 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061486
> LD45115.complete ATCAATCCCACGTTCTCGTACCTCACCAATCTGGAGGTAATGCAGATTCT ACAGAAGATCAAAAGCACCAAAAAGAAGTTCGGCATGCGCAACTTGGCCA CGGTTACCTATGAGGCACTGCAGTATCTGGAGGAGTCGCCCTGCAAGACA CAAACTCGTGAGAACATTATGAATTACGTTAAAGACCTGTCTTCTTATCG TCTAAAGTCCCAAGAGATCCTGCAAATGATCAACGATCCGCCTACAAGTG CACTACACACGCAACTGCTCATCGACGACAATAAAGCTCCACTAACCGAT GAGGAGAACGAGAAAATCATTCAGCTGAGCTACAAACACTTCCATGGTGG AGAAACCAAAGGCGCTGCTAAGGAAACACCGGCGGAAAAGCCTGCGGAGT CCACTGCGAAGGCCGGCAAGCAATCTGGCGTAAAGCGTAATGCCCAGGCA AAATCCAATCCAGCGGAACAAATAGCTCCAGCGGACAAAACCACGCCAGG TGATGGAGTTACTCCTGCGAATGTCGCTACTCCTTCAAGTGAAGCCACTA CTACTACTCCAGCAGAAGAAGCAAGCCCAGTGGAAACATCGTCTTCAGAA AATAATGCTACTCCAGCAAATGAAGCCACTACAGCGCCTGCAACGGATGC ACCCACTTCAATGGAAACCAAGTCCAATCCGACACCAGATGGAGAAAACC TCGGGTAGCAGCCGCCAAAATAACCCATCCGCTTATTACGTTTAACGTTT CATATATTTATGTTGATGGAGCGTATAAAATAAGCTAAAAAAAAAGGTAA ATTATTTATGTTCGCTTCTGATCGCCCAAATCCTCGATGACGTCCTCATC GATCTCGGCCCATTTTTCGGGTATGACATCGAACAAGTCATCCTTGACGT CACCCTGAATGACGATCTCGTCGTCTCCGGTAACCGAGGAGCCGCAGGCA AATTTCGTGCCAAAGAACTTGGCGGCCACCTTGAGATCAATATCTGGAAC AGACAGGGAATGTATTATGCTTAGTTAACAATAAAGCTCATAAGTATATC TAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rcp-RA | 1185 | Rcp-RA | 95..1147 | 1..1053 | 5265 | 100 | Plus |
Rcp-RB | 1150 | Rcp-RB | 95..1147 | 1..1053 | 5265 | 100 | Plus |
Rcp.b | 1048 | Rcp.b | 104..1045 | 112..1053 | 4710 | 100 | Plus |
Rcp.b | 1048 | Rcp.b | 71..115 | 1..45 | 195 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16774702..16775486 | 267..1051 | 3850 | 99.4 | Plus |
chrX | 22417052 | chrX | 16774489..16774643 | 113..267 | 745 | 98.7 | Plus |
chrX | 22417052 | chrX | 16774314..16774428 | 1..115 | 575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16774314..16774427 | 1..114 | 100 | -> | Plus |
chrX | 16774491..16774643 | 115..267 | 98 | -> | Plus |
chrX | 16774703..16775486 | 268..1051 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4875-RB | 10..717 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcp-RB | 10..717 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcp-RB | 10..717 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4875-RB | 10..717 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcp-RB | 10..717 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4875-RB | 28..1078 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcp-RB | 28..1078 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcp-RB | 30..1080 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4875-RB | 28..1078 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rcp-RB | 30..1080 | 1..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16884687..16884800 | 1..114 | 100 | -> | Plus |
X | 16884864..16885016 | 115..267 | 100 | -> | Plus |
X | 16885076..16885859 | 268..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16884687..16884800 | 1..114 | 100 | -> | Plus |
X | 16884864..16885016 | 115..267 | 100 | -> | Plus |
X | 16885076..16885859 | 268..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16884687..16884800 | 1..114 | 100 | -> | Plus |
X | 16884864..16885016 | 115..267 | 100 | -> | Plus |
X | 16885076..16885859 | 268..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16778720..16778833 | 1..114 | 100 | -> | Plus |
arm_X | 16778897..16779049 | 115..267 | 100 | -> | Plus |
arm_X | 16779109..16779892 | 268..1051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16893174..16893957 | 268..1051 | 100 | Plus | |
X | 16892785..16892898 | 1..114 | 100 | -> | Plus |
X | 16892962..16893114 | 115..267 | 100 | -> | Plus |
Translation from 0 to 707
> LD45115.hyp INPTFSYLTNLEVMQILQKIKSTKKKFGMRNLATVTYEALQYLEESPCKT QTRENIMNYVKDLSSYRLKSQEILQMINDPPTSALHTQLLIDDNKAPLTD EENEKIIQLSYKHFHGGETKGAAKETPAEKPAESTAKAGKQSGVKRNAQA KSNPAEQIAPADKTTPGDGVTPANVATPSSEATTTTPAEEASPVETSSSE NNATPANEATTAPATDAPTSMETKSNPTPDGENLG*
Translation from 39 to 707
> LD45115.pep MQILQKIKSTKKKFGMRNLATVTYEALQYLEESPCKTQTRENIMNYVKDL SSYRLKSQEILQMINDPPTSALHTQLLIDDNKAPLTDEENEKIIQLSYKH FHGGETKGAAKETPAEKPAESTAKAGKQSGVKRNAQAKSNPAEQIAPADK TTPGDGVTPANVATPSSEATTTTPAEEASPVETSSSENNATPANEATTAP ATDAPTSMETKSNPTPDGENLG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13917-PA | 178 | GF13917-PA | 17..167 | 1..149 | 544 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19087-PA | 257 | GG19087-PA | 17..206 | 1..191 | 809 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11926-PA | 137 | GH11926-PA | 17..126 | 1..108 | 448 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rcp-PC | 238 | CG4875-PC | 17..238 | 1..222 | 1132 | 100 | Plus |
Rcp-PB | 238 | CG4875-PB | 17..238 | 1..222 | 1132 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15347-PA | 133 | GI15347-PA | 17..117 | 1..101 | 443 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22778-PA | 162 | GL22778-PA | 17..122 | 1..106 | 529 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18494-PA | 166 | GA18494-PA | 17..122 | 1..106 | 528 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13474-PA | 234 | GM13474-PA | 17..234 | 1..222 | 981 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17317-PA | 234 | GD17317-PA | 17..234 | 1..222 | 985 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19451-PA | 132 | GJ19451-PA | 17..129 | 1..116 | 447 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18530-PA | 139 | GK18530-PA | 17..119 | 1..103 | 505 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17632-PA | 216 | GE17632-PA | 17..211 | 1..222 | 734 | 72.1 | Plus |