BDGP Sequence Production Resources |
Search the DGRC for LD45195
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 451 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Non2-RA |
Protein status: | LD45195.pep: gold |
Preliminary Size: | 1403 |
Sequenced Size: | 1321 |
Gene | Date | Evidence |
---|---|---|
CG1240 | 2001-01-01 | Release 2 assignment |
CG1240 | 2001-10-10 | Blastp of sequenced clone |
CG1240 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1240 | 2008-04-29 | Release 5.5 accounting |
CG1240 | 2008-08-15 | Release 5.9 accounting |
CG1240 | 2008-12-18 | 5.12 accounting |
1321 bp (1321 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061488
> LD45195.complete CTCATCAAGTAGCAACCCTATAGAGACGCCGGGACTTGGTGTAAAGAAAA AACGAAAAAGATTTGTCTTTTTAAGCGCCGCAAAGAATCCGGAAAAACGT GAATATACCACCGAAAACGGATCTCCGGCTGAAACCCCTACGTGTAGCGC AGGAAAACGAGGAACACCACGAACCAAGATGTCGGACATCTCCAGCGAGG ACCTGCGTCGTGAAATTCAGGCGGTTCTGAAGGACGCCGATTTGGCGACC ATTTCGGCAAAGAGGGTGCGCGAGCAGGTGGAGGGAAAGCTGAACTGCTC GTTGCTGAGCCGCAAGAAGGAGTTCGACAAGATCGTGATGGAGGTGATCA ACGAGCAGCAGGACGAGGAGGACGAAGACGATGACGAGGGCAAGGATCCC GATGCCGATCCCGACGATGAGAGCGAGCCCAGCGAGGAGGAGGACCCCAG CAGCAGCGAGGAGGAGGCCGCCAAGAAGAAGAAGCAGAGCCCCAAGAAGA GGCCACAGCCCACGAAGCACAAGGCGCCCAAGAAGAAGCGCAAGACCCTA AATGCCGACGATTCCGGCACCGAGAGCGATGCCGGCTCGGACTCGGACTA CGAGGTGGTCAAGAAGCCGGCGGCCAAGAAGAAGGCCAAGGCGGCCGGGG GAACAGGATCGGGACGTAAGAGCACCGGCTTCACACGCGCATACAATCTA TCACCGGAACTGAGCGCCCTCATGGGAGAGTCCTCCCTGCCGCGCCACGA AGTCGTGAAGAAGGTGTGGGCCATCATCAAGGAGCGCGATTTGTACGACC CCAAGAACAAGCAGTTCGCCATTTGCGACGACGAGCTGATGAAGGTGATG AAGATCCGCCGCTTCCGCACCTTTGGCATGCTGAAGCATCTCAAGCCGCA CTTTCTCGATTAGATCAGATCCGCCCTCCGATCCTCTCCAGATGCAAATA TATGTGTATGCCTCTCCGCCAGCCTGGTTTACCAATCCCCTGTAACTTTC GGCTCCGCCTGGATTTGTTTGTTCCACAACCTTTGATTAAGATTTAGTTG ACGCATGTGTTTAGCATTACCCTAATTAGGACGGGTTTGCACATTATGCA CTTTACGGCATTTTAGGAATAGTTCAGATGAACGGAAAATTACAAAAAAA AAATCGATTATAATACATAATGTGTATGATTTTTTTTATGACAAACTCGT GTAGTTTACATTTTATAAAATATCAAAGAAAAACATAACAAGTTTAAGGC AAGTACCGAGTAATAAAAAGAGAAATAGACGAGTGATGCATCTGAAAAAT ACGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1240-RA | 1419 | CG1240-RA | 72..1377 | 1..1306 | 6530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rover | 7318 | rover ROVER 7318bp | 4442..4532 | 1255..1169 | 112 | 61.5 | Minus |
G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 574..599 | 368..393 | 112 | 92.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2766451..2766577 | 1..127 | 100 | -> | Plus |
chr3L | 2766652..2767829 | 128..1303 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 1..735 | 179..913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 1..735 | 179..913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 1..735 | 179..913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 1..735 | 179..913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Non2-RA | 1..735 | 179..913 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 21..1323 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 21..1323 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 18..1320 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1240-RA | 21..1323 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Non2-RA | 18..1320 | 1..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2767016..2767142 | 1..127 | 100 | -> | Plus |
3L | 2767217..2768392 | 128..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2767016..2767142 | 1..127 | 100 | -> | Plus |
3L | 2767217..2768392 | 128..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2767016..2767142 | 1..127 | 100 | -> | Plus |
3L | 2767217..2768392 | 128..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2767016..2767142 | 1..127 | 100 | -> | Plus |
arm_3L | 2767217..2768392 | 128..1303 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2767217..2768392 | 128..1303 | 100 | Plus | |
3L | 2767016..2767142 | 1..127 | 100 | -> | Plus |
Translation from 0 to 912
> LD45195.hyp SSSSNPIETPGLGVKKKRKRFVFLSAAKNPEKREYTTENGSPAETPTCSA GKRGTPRTKMSDISSEDLRREIQAVLKDADLATISAKRVREQVEGKLNCS LLSRKKEFDKIVMEVINEQQDEEDEDDDEGKDPDADPDDESEPSEEEDPS SSEEEAAKKKKQSPKKRPQPTKHKAPKKKRKTLNADDSGTESDAGSDSDY EVVKKPAAKKKAKAAGGTGSGRKSTGFTRAYNLSPELSALMGESSLPRHE VVKKVWAIIKERDLYDPKNKQFAICDDELMKVMKIRRFRTFGMLKHLKPH FLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Non2-PA | 244 | CG1240-PA | 1..244 | 60..303 | 1249 | 100 | Plus |
Translation from 178 to 912
> LD45195.pep MSDISSEDLRREIQAVLKDADLATISAKRVREQVEGKLNCSLLSRKKEFD KIVMEVINEQQDEEDEDDDEGKDPDADPDDESEPSEEEDPSSSEEEAAKK KKQSPKKRPQPTKHKAPKKKRKTLNADDSGTESDAGSDSDYEVVKKPAAK KKAKAAGGTGSGRKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAII KERDLYDPKNKQFAICDDELMKVMKIRRFRTFGMLKHLKPHFLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24247-PA | 247 | GF24247-PA | 1..247 | 1..244 | 758 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14886-PA | 244 | GG14886-PA | 1..244 | 1..244 | 1240 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16267-PA | 254 | GH16267-PA | 1..252 | 1..243 | 763 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Non2-PA | 244 | CG1240-PA | 1..244 | 1..244 | 1249 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13202-PA | 245 | GI13202-PA | 1..245 | 1..244 | 884 | 82.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18416-PA | 246 | GL18416-PA | 1..246 | 1..244 | 778 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11609-PA | 246 | GA11609-PA | 1..246 | 1..244 | 778 | 83.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14512-PA | 111 | GM14512-PA | 4..111 | 137..244 | 574 | 98.1 | Plus |
Dsec\GM14510-PA | 80 | GM14510-PA | 1..72 | 1..72 | 359 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13706-PA | 229 | GD13706-PA | 1..229 | 1..244 | 814 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11979-PA | 247 | GJ11979-PA | 1..247 | 1..244 | 873 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12593-PA | 246 | GK12593-PA | 1..246 | 1..244 | 798 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20337-PA | 244 | GE20337-PA | 1..244 | 1..244 | 1236 | 98 | Plus |