Clone LD45221 Report

Search the DGRC for LD45221

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:452
Well:21
Vector:pOT2
Associated Gene/Transcriptmi-RA
Protein status:LD45221.pep: gold
Preliminary Size:3617
Sequenced Size:3865

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5360 2002-05-17 Blastp of sequenced clone
CG5360 2003-01-01 Sim4 clustering to Release 3
CG5360 2008-04-29 Release 5.5 accounting
CG5360 2008-08-15 Release 5.9 accounting
CG5360 2008-12-18 5.12 accounting

Clone Sequence Records

LD45221.complete Sequence

3865 bp (3865 high quality bases) assembled on 2002-05-17

GenBank Submission: AY118589

> LD45221.complete
TTAGTACCACCGCCAAAAGCAGGCAGATGTTCATACAGGCGATTTTAACA
ACAGTGTTTTATAGATAAATTAACAAATTAAAGGTATTTTAAGGAGCTAG
ACAACATGCATTAGGAGCTACAAGCTCGCGGGCACAACTGGATACTAGCG
ATAGGCGTGCAGCGTGCGACTCGAGCGCGTTAAATGTCCGCAAAAGTCAG
ACTTCTACGCGCGTTTTTCGCTTGGGTAACTTAGTTTTCCCCGACCTGGG
AAAAGTGCCACATTTCCAAAAGCCATTCGTCAGGCTCCACAAACTGGAGC
AGCCTGTACAAAATGCCGCGTGCCTAAAATAACTTCGGGCTATAGAAGAA
GCTATAACTACAACGAGAAATCTATTTTTATTCGAAGAATGGCCACTATT
GGAAACAAGATAAACAACAGCTACGAATCGGAGCCTTCTACAGGAAGCGG
GTCTTCGCTCAGTGAAAACAATGAGAGCCACATATCTGACGAGGATCACA
TGAACTTACCGTATCTGATGAAACCGAAAGCACTGAGCAGCCAGCCCATC
AAGGAAACCCCAACGCCACCCAATCCGAAGACGGGCAGCCAGGAATCGCA
GTTCCTGGGCTTCGGAGACAGCCCATATGGCCAGGTGAACAAGCGTCTGT
ATGGCTCCCAGCTGCAGAACCTTAAGCTGCCGGAGGTGGAGCCCCCTGCC
GTCCGACGTCCCTCGCCGGGCAAGATTGTCTTTCCCCGGTTCTACGACAC
CCTCATCGAGGAGAACAGCTGCAATGCCGTGGACATGGCCGTGTCAGTGG
CCACGACAGCCACCACGACAACGGGCAGCCTCTCCTTCGATGGCAAAATC
AAGAGCCTGACCGCAAAGCCCGAAATTCAGGACAAGCCTGGGCCCTCCAA
TGCTACGAATCCACGTCTGTCAAACGTGCTAGAAACCTCGCTCAACACCT
CGCAGCAGAAGTTCAACAACGAACGCTCACCTGATCTCTTTGCCGACAGC
GACGATGAAGCTGACAACGACGAGCAACCGGAAAAAGAGCCGCCCACCAG
GCTGGAGGATCTGCCCGAAGTGTTGGAAGAGTCGCAGTGCACCAGCGACG
CACGAGCTCGCTCCTCGCTGAATGCTCCCACGGAGTCCAGTTTTGTGGAT
GAGCAGACGATGGACCTTTCGAGCACCCAGCTGAACGCCAACGACCCCCG
GTCGCACTTCTTGGAGAACTGCAGGAGAGAACGGGAGCTGTATCGGCGGA
TTCGTCGCTGCCTACAGGGAGTTCGTCCGCCGCCCTCGGTGACTGCACCC
GATGTGGACGTCATCAAAATGGTGCTTAGCATGAAATCAAACGTGCTAAA
CTTTCTCTCCAAGGATAGCCCACCATCTACACCCAGAATCGAGGACAGTG
GCATTAGCGAAACAACCTCACTGTTTCGACCATCTCACAGTCTCTCGGAG
GCTCAAAACATGGGCTGGCGGGATGTGCTGGGAGTAAGACATCATGGACT
GAGCTACAATCTTAACAAGGCTGCCGAACAAAATGAATACCTCAGCATGT
CCGTGGTGGACCGCTATGTGGGCGTGGAAACCGCGACGTCCTATGTGAGA
TCGCCATCGAGCGCCAAGAAGAGAAACATGCGTATGAAAATGTTAACCCA
ATCGCCTGGCAATCGCCTCAGTCATTTGGCCAAACGACGTGCCATATTTT
CATCTGCGAATCTAGCCACCAACTCACAGAAGCTTAACAGCTCAATTGGA
CCACAAATAATGCTAGATAAGAAAAAAGTGCGAAATAAACGCAAGGCCAC
GCCCAAGCGAAAGACGCCGGGCAGCAAGAAAAAAGCTCGCAAGACGCCAT
CTTCATCCGCCCGAAAGCGCCTCTACCGCACTGATCTCATCAAGCCAGGA
CCTTCGAGAGAAACCTCTAAGCGTGCCTTATTCCAAAGTCCGGCCAAAAC
CCTGCAGCAACAGCAGCTAATGCCGCCCAAACCGCTCTTCAAGCCGGAGA
TTGCGAACCGCGTAGAGCGGTCGAAGCGCGCTCTCTTTTCGCCGGATCAC
CAGGGCAGCAGTAACCAGCTGGAGTCGATCCTGAAGCGGAAAAGAAACGC
CTGCGATGACGACGAGGATTCAGCTGATTTGGCTAGCCAGAGCAGCAAGC
TCTTCCGGGCCGAGAGCAGTGGACCCAGTGGGTTGACTCCTCGCGCTCTA
AAGATCAAGAGCCAGAGTTTCTGCATTGGAGCTGGTTCCTCCACTGCGGG
TGTTCAGCTAAAGTTGGCGCAGCACGCGGCTGCTACCCCTGGGCAGACGC
GGCTCAGTCTTGGCCTGAGCGGCAGCAGTAGCAACCTGGTTAACCCGGCA
TCTTTTGCAAGCGGTACGCCACTGGCGAGTAAACTGCACAGAGCGCACTC
GGAGATGAGCGCCACACCGAATAGCAGTATGACTGATAACCAGCGAAAGA
AACTCCTTTGGGCTGTGTCGCAGGCACTGCAGGAGAAGAAAATTACGCCG
AAGCACGAGCAATTCCGTCAGCATGCGGCAGACCTTACGCGCATTGTGAA
GCGCATCTTCCAGGAATTCTACCTGGGACATTCGTCCAGCAACAGCGAAA
CACTGCTAAGGCTGGCCAAGAAGTTTGCCTTTAGCGTGATTGCGGGGAAG
AATGCGGACGACGTTTACCTGCAGGCGCGCAGTCAGGAATGCGAGGCCAA
GCGGTTGTCGAGCACCCGCCTCTCGGGCTACATCGGTCCGGAGGAGTTTG
CCCAGCGTAAACTGCTTCTCTCGCAAACATCGGTCGTAGGATCAGCAGCA
GGTTCGGCGCGATCCCTGCACAACATCTTCGGCAGCGAGAACTCCATCGA
TTCCTTCGGTCTGAGTCAAATGAGCCTGCCCACAAATGCCTGCTCCGAAA
CGCAATCGAGTATAGTGGATCGCATCTCGGAGGATCTCTTCTGCAAGGAA
CGCCAACCCATCCGGCCCAATGCCTCGCTCCAGAACAGCTCGTCGAAGAG
TAACCTAGGCGGACTCGCGCTGCGCGAGAACATGGACTGCGAGGCTCGCC
GTTCGGCGCAAAAGAACTTTACCGGCAAGGACCAGCAGAACATCAGTCCC
TACTTCGGAGGCGGCGGAAGTAACAGCTCTGCGCGCAAGTTCCAAATGCC
ACCCGTGGGCAACAGCAACCACTCCGGAGGCAAGGCCAAGAGACAGATTT
CCTTTGACTGCTAGAAGAGTAGGGCCAATAGGATAATTGTTGAAACGTCA
TTATCATAATATGATGCCCATAAATCCTCTCCGATCCCTTGAAATTCTAG
GAGCAGAGGCAAGGAGCTGCCCGACGTGTAAATGAGTTTTAGCTCTTTAG
CCTTGTAAGCAAAAAGATTAACTCGTTTTTGTTTCCATTATTTTTTGTTT
GTTTTAGCTTAATTTATTAATTCAACTGTCAGGTCTCTTTAAACCCTTTC
AAACCATTTATATATAATGACAGACAATCGTATAATAATAGGTATAAGTA
AAATAATCTGATATAGATCTTATAGATCGCCTCTTCTTCGACTCGCAAGA
CTCCCGACTTTTCCTTGAGCTCAAATGTAGTTCAAATGCAAGTTAAATTT
CTTTTAGTAACGGCATACATACATGATCTATATGGGATTTATTTTATGCG
ACTCAAATTTGATGAATGCAATATTTTCCACTGAAGTTTAGATGTATTAA
GAACATTTTGTGCTTAAAAATTACAAATTTTACTTAACTACCGCACGAGT
ACTCAATGCAACTGAAATTAAGCTGAAGCAAGTTCTGTAACAGTGTAAAC
TGAAATTAGTATAATAAAAGCGCCCCAATCAATAGTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

LD45221.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG5360.d 4957 CG5360.d 110..3947 1..3838 19190 100 Plus
CG5360.f 5366 CG5360.f 110..3947 1..3838 19190 100 Plus
CG5360-RA 4128 CG5360-RA 110..3947 1..3838 19190 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19413374..19414601 2609..3836 6140 100 Plus
chr2R 21145070 chr2R 19410810..19411862 451..1503 5265 100 Plus
chr2R 21145070 chr2R 19412435..19413050 1834..2449 3020 99.4 Plus
chr2R 21145070 chr2R 19410206..19410477 1..272 1360 100 Plus
chr2R 21145070 chr2R 19410573..19410753 271..451 905 100 Plus
chr2R 21145070 chr2R 19413153..19413316 2448..2611 820 100 Plus
chr2R 21145070 chr2R 19411923..19412059 1502..1638 685 100 Plus
chr2R 21145070 chr2R 19412120..19412254 1639..1773 675 100 Plus
chr2R 21145070 chr2R 19412318..19412379 1774..1835 310 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:41:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:11:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23527033..23528262 2609..3838 6150 100 Plus
2R 25286936 2R 23524469..23525521 451..1503 5265 100 Plus
2R 25286936 2R 23526094..23526709 1834..2449 3080 100 Plus
2R 25286936 2R 23523865..23524136 1..272 1360 100 Plus
2R 25286936 2R 23524232..23524412 271..451 905 100 Plus
2R 25286936 2R 23526812..23526975 2448..2611 820 100 Plus
2R 25286936 2R 23525582..23525718 1502..1638 685 100 Plus
2R 25286936 2R 23525779..23525913 1639..1773 675 100 Plus
2R 25286936 2R 23525977..23526038 1774..1835 310 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23528232..23529461 2609..3838 6150 100 Plus
2R 25260384 2R 23525668..23526720 451..1503 5265 100 Plus
2R 25260384 2R 23527293..23527908 1834..2449 3080 100 Plus
2R 25260384 2R 23525064..23525335 1..272 1360 100 Plus
2R 25260384 2R 23525431..23525611 271..451 905 100 Plus
2R 25260384 2R 23528011..23528174 2448..2611 820 100 Plus
2R 25260384 2R 23526781..23526917 1502..1638 685 100 Plus
2R 25260384 2R 23526978..23527112 1639..1773 675 100 Plus
2R 25260384 2R 23527176..23527237 1774..1835 310 100 Plus
Blast to na_te.dros performed 2019-03-16 20:11:34
Subject Length Description Subject Range Query Range Score Percent Strand
NOF 4347 NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). 3870..3977 3662..3771 129 62.2 Plus
Stalker4 7359 Stalker4 STALKER4 7359bp 6757..6877 3521..3398 127 58.4 Minus
Stalker 7256 Stalker STALKER 7256bp 6649..6769 3521..3398 127 58.4 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 3057..3198 3525..3379 119 56.5 Minus

LD45221.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:12:54 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19412120..19412254 1639..1773 100 -> Plus
chr2R 19412318..19412379 1774..1835 100 -> Plus
chr2R 19410206..19410477 1..272 100 -> Plus
chr2R 19410575..19410753 273..451 100 -> Plus
chr2R 19410811..19411862 452..1503 100 -> Plus
chr2R 19411925..19412059 1504..1638 100 -> Plus
chr2R 19412437..19413050 1836..2449 99 -> Plus
chr2R 19413155..19413315 2450..2610 100 -> Plus
chr2R 19413376..19414601 2611..3836 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:28:26 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
CG5360-RA 1..2826 389..3214 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:48:38 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
mi-RA 1..2826 389..3214 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:40:14 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
mi-RA 1..2826 389..3214 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:41:10 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
CG5360-RA 1..2826 389..3214 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:54:10 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
mi-RA 1..2826 389..3214 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:25:19 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
CG5360-RA 8..3843 1..3836 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:48:38 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
mi-RA 8..3843 1..3836 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:40:14 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
mi-RA 10..3845 1..3836 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:41:10 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
CG5360-RA 8..3843 1..3836 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:10 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
mi-RA 10..3845 1..3836 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:12:54 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23523865..23524136 1..272 100 -> Plus
2R 23524234..23524412 273..451 100 -> Plus
2R 23524470..23525521 452..1503 100 -> Plus
2R 23525584..23525718 1504..1638 100 -> Plus
2R 23525779..23525913 1639..1773 100 -> Plus
2R 23525977..23526038 1774..1835 100 -> Plus
2R 23526096..23526709 1836..2449 100 -> Plus
2R 23526814..23526974 2450..2610 100 -> Plus
2R 23527035..23528260 2611..3836 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:12:54 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23523865..23524136 1..272 100 -> Plus
2R 23524234..23524412 273..451 100 -> Plus
2R 23524470..23525521 452..1503 100 -> Plus
2R 23525584..23525718 1504..1638 100 -> Plus
2R 23525779..23525913 1639..1773 100 -> Plus
2R 23525977..23526038 1774..1835 100 -> Plus
2R 23526096..23526709 1836..2449 100 -> Plus
2R 23526814..23526974 2450..2610 100 -> Plus
2R 23527035..23528260 2611..3836 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:12:54 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23523865..23524136 1..272 100 -> Plus
2R 23524234..23524412 273..451 100 -> Plus
2R 23524470..23525521 452..1503 100 -> Plus
2R 23525584..23525718 1504..1638 100 -> Plus
2R 23525779..23525913 1639..1773 100 -> Plus
2R 23525977..23526038 1774..1835 100 -> Plus
2R 23526096..23526709 1836..2449 100 -> Plus
2R 23526814..23526974 2450..2610 100 -> Plus
2R 23527035..23528260 2611..3836 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:40:14 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19411757..19411935 273..451 100 -> Plus
arm_2R 19411388..19411659 1..272 100 -> Plus
arm_2R 19411993..19413044 452..1503 100 -> Plus
arm_2R 19413107..19413241 1504..1638 100 -> Plus
arm_2R 19413302..19413436 1639..1773 100 -> Plus
arm_2R 19413500..19413561 1774..1835 100 -> Plus
arm_2R 19413619..19414232 1836..2449 100 -> Plus
arm_2R 19414337..19414497 2450..2610 100 -> Plus
arm_2R 19414558..19415783 2611..3836 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:13:28 Download gff for LD45221.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23525082..23525353 1..272 100 -> Plus
2R 23525451..23525629 273..451 100 -> Plus
2R 23525687..23526738 452..1503 100 -> Plus
2R 23526801..23526935 1504..1638 100 -> Plus
2R 23526996..23527130 1639..1773 100 -> Plus
2R 23527194..23527255 1774..1835 100 -> Plus
2R 23527313..23527926 1836..2449 100 -> Plus
2R 23528031..23528191 2450..2610 100 -> Plus
2R 23528252..23529477 2611..3836 100   Plus

LD45221.pep Sequence

Translation from 388 to 3213

> LD45221.pep
MATIGNKINNSYESEPSTGSGSSLSENNESHISDEDHMNLPYLMKPKALS
SQPIKETPTPPNPKTGSQESQFLGFGDSPYGQVNKRLYGSQLQNLKLPEV
EPPAVRRPSPGKIVFPRFYDTLIEENSCNAVDMAVSVATTATTTTGSLSF
DGKIKSLTAKPEIQDKPGPSNATNPRLSNVLETSLNTSQQKFNNERSPDL
FADSDDEADNDEQPEKEPPTRLEDLPEVLEESQCTSDARARSSLNAPTES
SFVDEQTMDLSSTQLNANDPRSHFLENCRRERELYRRIRRCLQGVRPPPS
VTAPDVDVIKMVLSMKSNVLNFLSKDSPPSTPRIEDSGISETTSLFRPSH
SLSEAQNMGWRDVLGVRHHGLSYNLNKAAEQNEYLSMSVVDRYVGVETAT
SYVRSPSSAKKRNMRMKMLTQSPGNRLSHLAKRRAIFSSANLATNSQKLN
SSIGPQIMLDKKKVRNKRKATPKRKTPGSKKKARKTPSSSARKRLYRTDL
IKPGPSRETSKRALFQSPAKTLQQQQLMPPKPLFKPEIANRVERSKRALF
SPDHQGSSNQLESILKRKRNACDDDEDSADLASQSSKLFRAESSGPSGLT
PRALKIKSQSFCIGAGSSTAGVQLKLAQHAAATPGQTRLSLGLSGSSSNL
VNPASFASGTPLASKLHRAHSEMSATPNSSMTDNQRKKLLWAVSQALQEK
KITPKHEQFRQHAADLTRIVKRIFQEFYLGHSSSNSETLLRLAKKFAFSV
IAGKNADDVYLQARSQECEAKRLSSTRLSGYIGPEEFAQRKLLLSQTSVV
GSAAGSARSLHNIFGSENSIDSFGLSQMSLPTNACSETQSSIVDRISEDL
FCKERQPIRPNASLQNSSSKSNLGGLALRENMDCEARRSAQKNFTGKDQQ
NISPYFGGGGSNSSARKFQMPPVGNSNHSGGKAKRQISFDC*

LD45221.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13060-PA 940 GF13060-PA 1..939 1..940 3662 82.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22862-PA 940 GG22862-PA 1..940 1..941 4618 95.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21234-PA 974 GH21234-PA 1..973 1..940 2986 65.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:51
Subject Length Description Subject Range Query Range Score Percent Strand
mi-PA 941 CG5360-PA 1..941 1..941 4788 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20519-PA 977 GI20519-PA 10..976 6..940 3033 67.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16919-PA 970 GL16919-PA 20..969 6..940 3639 77.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18825-PA 959 GA18825-PA 6..958 3..940 3639 76.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16021-PA 939 GM16021-PA 1..939 1..941 4902 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:35:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11771-PA 925 GD11771-PA 1..925 1..941 4779 96.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22371-PA 957 GJ22371-PA 1..956 1..940 3193 69.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23188-PA 970 GK23188-PA 7..969 3..940 3188 69.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:35:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14298-PA 939 GE14298-PA 1..939 1..941 4777 96.5 Plus

LD45221.hyp Sequence

Translation from 388 to 3213

> LD45221.hyp
MATIGNKINNSYESEPSTGSGSSLSENNESHISDEDHMNLPYLMKPKALS
SQPIKETPTPPNPKTGSQESQFLGFGDSPYGQVNKRLYGSQLQNLKLPEV
EPPAVRRPSPGKIVFPRFYDTLIEENSCNAVDMAVSVATTATTTTGSLSF
DGKIKSLTAKPEIQDKPGPSNATNPRLSNVLETSLNTSQQKFNNERSPDL
FADSDDEADNDEQPEKEPPTRLEDLPEVLEESQCTSDARARSSLNAPTES
SFVDEQTMDLSSTQLNANDPRSHFLENCRRERELYRRIRRCLQGVRPPPS
VTAPDVDVIKMVLSMKSNVLNFLSKDSPPSTPRIEDSGISETTSLFRPSH
SLSEAQNMGWRDVLGVRHHGLSYNLNKAAEQNEYLSMSVVDRYVGVETAT
SYVRSPSSAKKRNMRMKMLTQSPGNRLSHLAKRRAIFSSANLATNSQKLN
SSIGPQIMLDKKKVRNKRKATPKRKTPGSKKKARKTPSSSARKRLYRTDL
IKPGPSRETSKRALFQSPAKTLQQQQLMPPKPLFKPEIANRVERSKRALF
SPDHQGSSNQLESILKRKRNACDDDEDSADLASQSSKLFRAESSGPSGLT
PRALKIKSQSFCIGAGSSTAGVQLKLAQHAAATPGQTRLSLGLSGSSSNL
VNPASFASGTPLASKLHRAHSEMSATPNSSMTDNQRKKLLWAVSQALQEK
KITPKHEQFRQHAADLTRIVKRIFQEFYLGHSSSNSETLLRLAKKFAFSV
IAGKNADDVYLQARSQECEAKRLSSTRLSGYIGPEEFAQRKLLLSQTSVV
GSAAGSARSLHNIFGSENSIDSFGLSQMSLPTNACSETQSSIVDRISEDL
FCKERQPIRPNASLQNSSSKSNLGGLALRENMDCEARRSAQKNFTGKDQQ
NISPYFGGGGSNSSARKFQMPPVGNSNHSGGKAKRQISFDC*

LD45221.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:16:51
Subject Length Description Subject Range Query Range Score Percent Strand
mi-PA 941 CG5360-PA 1..941 1..941 4788 100 Plus