BDGP Sequence Production Resources |
Search the DGRC for LD45245
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 452 |
Well: | 45 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5961-RA |
Protein status: | LD45245.pep: gold |
Preliminary Size: | 1706 |
Sequenced Size: | 1640 |
Gene | Date | Evidence |
---|---|---|
CG5961 | 2001-01-01 | Release 2 assignment |
CG5961 | 2001-11-29 | Blastp of sequenced clone |
CG5961 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5961 | 2008-04-29 | Release 5.5 accounting |
CG5961 | 2008-08-15 | Release 5.9 accounting |
CG5961 | 2008-12-18 | 5.12 accounting |
1640 bp (1640 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069677
> LD45245.complete CTCGTTTGCGTATTTGAATACTCTTAATCTTGGGGTCTTACCAATGGCCA CATGTTGCTCCCAGTTGCATACAACTACGAAATTCTGGGGTGAAGCCCGC GCCCAAAATCAGCAATACGCGCGGCCCTTTATTATAAGTTCTATTTTGTT ACCAACTTCCGTACCTTTCCACATCGAATACTAAAATCTTTCAGACTAGT TTCTAGCTCTAATCATGTCGGATGTGGACTCGGATGGCGAGGAGCCAACC CGGAAAACGGGCACCAATGCACTGGATGAGTTCCGGGAGAACTGGCAGCG GGAGCTGCAGGAACACACAACAAACACTGGATCCAGGAGCCATTCCGAGG CTGGAGATCGCCTCACGGCGGCCAATTCCAATCTCAGCGAGGCTGATCTA CTGCAGGCCAAGGCGGAGAGTCTCTATCGGACCGCTGTGCAGCTGGAGCA GCGTGGCAAGGTCTACGACGCACTACCCTTCTACAGGAAGGCCACCCAAA TCGTTCCGGATATTGAGTTCAGGTTCTACGAGCAGCAGAAGCAAAAGCTC AGCAACGATGTCAGCAAGAAGTACCTCAATCTGGCTAACGATTTGGCCAA GCAATTGGATCTAGGTCAGTCGGATGGGGAGGAGGTCGTGGACAACCTGT ACGAAAAGTTCCAGCATGATTTGCGTCAGAAAAACATTTACAATGGCAAG ATGATAGCATCCAGCCGTGATGCCAATGTCCTGACCACCGGTCTGCACTT TGCCGACCTGCCGCCCGAGATTGTGATGCGCATCCTGCGCTGGGTGGTTT CCGCCCAACTGGACATGCGCTCGCTAGAGCAGTGCGCTGCTGTTTGCAAA GGTTTCTATGTCTACGCGCGGGATGAGGAGCTCTGGAGGCTAGCTTGTGT CAAAGTATGGGGCCACAACGTTGGAACTCTAGAGGCCCAGGATTCGGATG TAAGCAACGTGTTCCACTCCTGGCGAGACATGTTCATCCGCCGAGACCGA GTTCTTTTCAACGGCTGCTACATCAGCAAGACTACGTACCTGAGAATGGG CGAGAACAGCTTCCAGGATCAGTTCTACCGTCCTGTGCAACTGGTGGAGT ACTATCGCTACATTCGCTTTCTGCCCGATGGCAAGGTGCTGATGATGACG ACTGCCGATGAGCCGGCGCAAGGTGTATCCAAACTGAAGCACGTGAACAA CGTACGGGCGGAAATGCTTCGGGGTCGCTATCGTCTCTTCGGGAGCACAG TCACTCTGGTGCTGCAAAAGTCGCAGCAGCGAGGGCCGGCTAACGTGCGG CAGAGGCGAGGGAGTATCATGCCAGTGGATGAGGACTCCTCACAGTTCCT GATCGAGCTGCGCATCGCAGGCACCACCAAGCGCCGATGCGCCCAGTTGG TTTGGTCACATTACACGCTCGTGCAGAAGCGCAACAAGGTGGACATCAGC TCCGAGTTCGATTTGACCGAGGCCAAATATCCGGCGCTGAGGTTCTCAAC CGTAAAGAGCTACCATCTTGATGCTGATGCACCATTGGCTTAGGTTAATT AGAATTAGAATGGATTTCTGCAAGTTGGAAATAAAACAATATGTTTTGAA ACCCTTTTAGAGGGGGAGTGGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5961-RA | 1674 | CG5961-RA | 50..1673 | 1..1624 | 8120 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 8283810..8284527 | 1621..904 | 3575 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 8284589..8285300 | 903..192 | 3485 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 8285362..8285555 | 194..1 | 955 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 12458418..12459138 | 1624..904 | 3605 | 100 | Minus |
3R | 32079331 | 3R | 12459200..12459911 | 903..192 | 3560 | 100 | Minus |
3R | 32079331 | 3R | 12459973..12460166 | 194..1 | 970 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 12199249..12199969 | 1624..904 | 3605 | 100 | Minus |
3R | 31820162 | 3R | 12200031..12200742 | 903..192 | 3560 | 100 | Minus |
3R | 31820162 | 3R | 12200804..12200997 | 194..1 | 970 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 8285362..8285555 | 1..194 | 99 | Minus | |
chr3R | 8283810..8284527 | 904..1621 | 99 | <- | Minus |
chr3R | 8284589..8285297 | 195..903 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 1..1329 | 215..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RB | 1..1329 | 215..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 1..1329 | 215..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 1..1329 | 215..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 1..1329 | 215..1543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 35..1655 | 1..1621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 35..1655 | 1..1621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 38..1658 | 1..1621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 35..1655 | 1..1621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5961-RA | 38..1658 | 1..1621 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12458421..12459138 | 904..1621 | 100 | <- | Minus |
3R | 12459200..12459908 | 195..903 | 100 | <- | Minus |
3R | 12459973..12460166 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12458421..12459138 | 904..1621 | 100 | <- | Minus |
3R | 12459200..12459908 | 195..903 | 100 | <- | Minus |
3R | 12459973..12460166 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12458421..12459138 | 904..1621 | 100 | <- | Minus |
3R | 12459200..12459908 | 195..903 | 100 | <- | Minus |
3R | 12459973..12460166 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 8284143..8284860 | 904..1621 | 100 | <- | Minus |
arm_3R | 8284922..8285630 | 195..903 | 100 | <- | Minus |
arm_3R | 8285695..8285888 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 12200804..12200997 | 1..194 | 100 | Minus | |
3R | 12199252..12199969 | 904..1621 | 100 | <- | Minus |
3R | 12200031..12200739 | 195..903 | 100 | <- | Minus |
Translation from 214 to 1542
> LD45245.pep MSDVDSDGEEPTRKTGTNALDEFRENWQRELQEHTTNTGSRSHSEAGDRL TAANSNLSEADLLQAKAESLYRTAVQLEQRGKVYDALPFYRKATQIVPDI EFRFYEQQKQKLSNDVSKKYLNLANDLAKQLDLGQSDGEEVVDNLYEKFQ HDLRQKNIYNGKMIASSRDANVLTTGLHFADLPPEIVMRILRWVVSAQLD MRSLEQCAAVCKGFYVYARDEELWRLACVKVWGHNVGTLEAQDSDVSNVF HSWRDMFIRRDRVLFNGCYISKTTYLRMGENSFQDQFYRPVQLVEYYRYI RFLPDGKVLMMTTADEPAQGVSKLKHVNNVRAEMLRGRYRLFGSTVTLVL QKSQQRGPANVRQRRGSIMPVDEDSSQFLIELRIAGTTKRRCAQLVWSHY TLVQKRNKVDISSEFDLTEAKYPALRFSTVKSYHLDADAPLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17039-PA | 438 | GF17039-PA | 1..437 | 1..441 | 1709 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17121-PA | 445 | GG17121-PA | 1..445 | 1..442 | 2217 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19048-PA | 437 | GH19048-PA | 2..437 | 6..442 | 1524 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5961-PB | 442 | CG5961-PB | 1..442 | 1..442 | 2291 | 100 | Plus |
CG5961-PC | 442 | CG5961-PC | 1..442 | 1..442 | 2291 | 100 | Plus |
CG5961-PA | 442 | CG5961-PA | 1..442 | 1..442 | 2291 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24341-PA | 434 | GI24341-PA | 2..434 | 6..442 | 1518 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27171-PA | 443 | GL27171-PA | 1..443 | 1..442 | 1744 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19260-PA | 443 | GA19260-PA | 1..443 | 1..442 | 1741 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26004-PA | 446 | GM26004-PA | 1..446 | 1..442 | 2292 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20562-PA | 446 | GD20562-PA | 1..446 | 1..442 | 2287 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10427-PA | 440 | GJ10427-PA | 1..440 | 1..442 | 1488 | 65.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12109-PA | 431 | GK12109-PA | 1..431 | 1..442 | 1656 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24513-PA | 445 | GE24513-PA | 1..445 | 1..442 | 2220 | 92.6 | Plus |
Translation from 214 to 1542
> LD45245.hyp MSDVDSDGEEPTRKTGTNALDEFRENWQRELQEHTTNTGSRSHSEAGDRL TAANSNLSEADLLQAKAESLYRTAVQLEQRGKVYDALPFYRKATQIVPDI EFRFYEQQKQKLSNDVSKKYLNLANDLAKQLDLGQSDGEEVVDNLYEKFQ HDLRQKNIYNGKMIASSRDANVLTTGLHFADLPPEIVMRILRWVVSAQLD MRSLEQCAAVCKGFYVYARDEELWRLACVKVWGHNVGTLEAQDSDVSNVF HSWRDMFIRRDRVLFNGCYISKTTYLRMGENSFQDQFYRPVQLVEYYRYI RFLPDGKVLMMTTADEPAQGVSKLKHVNNVRAEMLRGRYRLFGSTVTLVL QKSQQRGPANVRQRRGSIMPVDEDSSQFLIELRIAGTTKRRCAQLVWSHY TLVQKRNKVDISSEFDLTEAKYPALRFSTVKSYHLDADAPLA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5961-PB | 442 | CG5961-PB | 1..442 | 1..442 | 2291 | 100 | Plus |
CG5961-PC | 442 | CG5961-PC | 1..442 | 1..442 | 2291 | 100 | Plus |
CG5961-PA | 442 | CG5961-PA | 1..442 | 1..442 | 2291 | 100 | Plus |