BDGP Sequence Production Resources |
Search the DGRC for LD45253
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 452 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | CG34159-RA |
Protein status: | LD45253.pep: gold |
Preliminary Size: | 1088 |
Sequenced Size: | 958 |
Gene | Date | Evidence |
---|---|---|
CG5739 | 2001-01-01 | Release 2 assignment |
CG34159 | 2008-04-29 | Release 5.5 accounting |
CG34159 | 2008-08-15 | Release 5.9 accounting |
CG34159 | 2008-12-18 | 5.12 accounting |
958 bp (958 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122195
> LD45253.complete CGACTGAAGAGAAAAGATTTATACGGAATATAAATAAATTTTCGGCGATA AACAAGACAACTTGGGGAGATTAATTTTACTCAAGCACCTGACAACATGG ATCGCAATAATGGACGCTATCCCTACAACATTAGGCGGCAGAACAGCGGG CACAATGCGCCGCACAGCTACCATCACCACCATAACAACAATTCGGCGGC GGGGGCGTCCAATTCGCCGGGATACAATAACCACAGTGCCGGAAACTCTC CGTCCGTCGGTGGCCATAACAACAGCAATCCGCTCTACGCCTCCGCCGCC GGACAGCAGCAGCAACAACAGCAACCACAGAGCCTGCCAATCTCGCAGCA CGATGAGCTCATCCGGTACATCCGGGGGGCATGGATCAAGGTCTACGAAC AGGGTCCACCTGTGCTGTACTGCAACGAATCCGACAATCAGCTGAAGAAC TTTAAGCCATTCGATTTGGAGGAGTACTGGGGCCAGCGCCTGGTGCAGAA CATCCATGTGACCACCACGCAGGCCGGTGGACACCAGTAGAAGCGGGAAT CTGAACAGCGGACAACGGCATGTGCTCCATGTGGTAACGATTAATTAAAT TATACATTTAAAAAGGGTGCCAGCTTCCTCCCGATTATTGACTAATTTCC ATGCTATTGGAATTTACAATTTATGTTTGTTTGCTAACTGCTTTGGACTA TTGTGTGTGTAAAAAAAAAAAAAACGATTTAAATCCACTGCCAGCTGAAA GGCAAACCATGATTCAATAAAGTGTACATTGGCAAACGATTTTTATCCCT GGCACCCTGAATCTAGCTTGCTATCTGCATTTAAGTGTTGTGCACTAAGC GCGCTTAAAATTTGACCAGAACAACAATAAACAATCTAGAGCGTAGACAA ATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34159-RA | 1031 | CG34159-RA | 79..983 | 1..905 | 4525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10201402..10201915 | 905..389 | 2505 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 10202263..10202542 | 392..113 | 1400 | 100 | Minus |
chr2L | 23010047 | chr2L | 10203053..10203165 | 113..1 | 565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10202518..10203034 | 905..389 | 2585 | 100 | Minus |
2L | 23513712 | 2L | 10203382..10203661 | 392..113 | 1400 | 100 | Minus |
2L | 23513712 | 2L | 10204172..10204284 | 113..1 | 565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10202518..10203034 | 905..389 | 2585 | 100 | Minus |
2L | 23513712 | 2L | 10203382..10203661 | 392..113 | 1400 | 100 | Minus |
2L | 23513712 | 2L | 10204172..10204284 | 113..1 | 565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
roo | 9092 | roo DM_ROO 9092bp | 1050..1138 | 241..330 | 131 | 64.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2537 | 122..339 | 127 | 57.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1557..1594 | 304..340 | 124 | 84.2 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1053..1121 | 289..358 | 122 | 65.7 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3257..3319 | 263..329 | 119 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2309..2364 | 303..358 | 118 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2596..2659 | 268..329 | 117 | 67.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2408..2444 | 303..339 | 113 | 78.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6823 | 303..330 | 113 | 89.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2483 | 159..330 | 112 | 54.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6840..6907 | 268..330 | 111 | 69.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2303..2348 | 286..330 | 110 | 73.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2803..2851 | 302..350 | 110 | 69.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6829..6884 | 303..358 | 109 | 66.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10201404..10201913 | 391..903 | 99 | <- | Minus |
chr2L | 10202265..10202541 | 114..390 | 100 | <- | Minus |
chr2L | 10203053..10203165 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..444 | 97..540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..444 | 97..540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..444 | 97..540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..444 | 97..540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..444 | 97..540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..903 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 37..939 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 34..936 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 1..903 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34159-RA | 34..936 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10202520..10203032 | 391..903 | 100 | <- | Minus |
2L | 10203384..10203660 | 114..390 | 100 | <- | Minus |
2L | 10204172..10204284 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10202520..10203032 | 391..903 | 100 | <- | Minus |
2L | 10203384..10203660 | 114..390 | 100 | <- | Minus |
2L | 10204172..10204284 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10202520..10203032 | 391..903 | 100 | <- | Minus |
2L | 10203384..10203660 | 114..390 | 100 | <- | Minus |
2L | 10204172..10204284 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10202520..10203032 | 391..903 | 100 | <- | Minus |
arm_2L | 10203384..10203660 | 114..390 | 100 | <- | Minus |
arm_2L | 10204172..10204284 | 1..113 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10202520..10203032 | 391..903 | 100 | <- | Minus |
2L | 10203384..10203660 | 114..390 | 100 | <- | Minus |
2L | 10204172..10204284 | 1..113 | 100 | Minus |
Translation from 96 to 539
> LD45253.pep MDRNNGRYPYNIRRQNSGHNAPHSYHHHHNNNSAAGASNSPGYNNHSAGN SPSVGGHNNSNPLYASAAGQQQQQQQPQSLPISQHDELIRYIRGAWIKVY EQGPPVLYCNESDNQLKNFKPFDLEEYWGQRLVQNIHVTTTQAGGHQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14133-PA | 141 | GF14133-PA | 1..141 | 1..147 | 405 | 62.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23974-PA | 146 | GG23974-PA | 1..146 | 1..147 | 746 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10648-PA | 154 | GH10648-PA | 1..152 | 1..141 | 328 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34159-PA | 147 | CG34159-PA | 1..147 | 1..147 | 819 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10835-PA | 146 | GI10835-PA | 1..144 | 1..141 | 338 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19180-PA | 1121 | GL19180-PA | 594..711 | 6..126 | 311 | 61.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25871-PA | 144 | GA25871-PA | 1..144 | 1..147 | 429 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11951-PA | 150 | GM11951-PA | 1..150 | 1..147 | 725 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22298-PA | 150 | GD22298-PA | 1..150 | 1..147 | 733 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18287-PA | 148 | GJ18287-PA | 1..146 | 1..141 | 360 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18699-PA | 143 | GK18699-PA | 1..143 | 1..147 | 357 | 61.2 | Plus |
Dwil\GK18388-PA | 143 | GK18388-PA | 1..143 | 1..147 | 357 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26373-PA | 146 | GE26373-PA | 1..146 | 1..147 | 741 | 98 | Plus |
Translation from 96 to 539
> LD45253.hyp MDRNNGRYPYNIRRQNSGHNAPHSYHHHHNNNSAAGASNSPGYNNHSAGN SPSVGGHNNSNPLYASAAGQQQQQQQPQSLPISQHDELIRYIRGAWIKVY EQGPPVLYCNESDNQLKNFKPFDLEEYWGQRLVQNIHVTTTQAGGHQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34159-PA | 147 | CG34159-PA | 1..147 | 1..147 | 819 | 100 | Plus |