BDGP Sequence Production Resources |
Search the DGRC for LD45288
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 452 |
Well: | 88 |
Vector: | pOT2 |
Associated Gene/Transcript | Sec22-RA |
Protein status: | LD45288.pep: gold |
Preliminary Size: | 1802 |
Sequenced Size: | 1744 |
Gene | Date | Evidence |
---|---|---|
CG7359 | 2001-01-01 | Release 2 assignment |
CG7359 | 2001-11-29 | Blastp of sequenced clone |
CG7359 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7359 | 2008-04-29 | Release 5.5 accounting |
CG7359 | 2008-08-15 | Release 5.9 accounting |
CG7359 | 2008-12-18 | 5.12 accounting |
1744 bp (1744 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069680
> LD45288.complete TGGTTACATTGCAACAAACATCCACAGAAACCTCCAATCCACTCCAATCC CAGACACCCGCCCGCCGCGACGTTGCAACACAGTTTTCATGGTAGCAGCG AACGTTCCCGATTCGAGGCAGAGTCCATTTGGAAGTCCCGGGCATCGCAG GAGCACTGCGGCAAGCACCGACCGATCGGCTGAGTTGTGAAATCCAAGAA GTGGAAGAGGACGACCGGACACAAACTTCACACACTGGTGACTGGACTGC AGCGGATCCACATCGGAATAAGTAGCAGCCAGTGGAAGGAGGCGACGGCA GAGTGCAGCCGTGGCCAAGAAGACTTGAGACGCAGCCCCGTAGTTCCGCG AGCAATCGTAACCAGGAACAGCAGAAGCCATGGCGCTGCTGACCATGATA GCCAGGGTCATCGATGGCCTTCCTCTGGTGGGGACCATGCAGGATGACGA GCAGAGCGGACGCAGCATACTGGACTACCAAAACCAGGCTAAGATGCTCT TCCGCAAGCTGGGTACCCACTCCCCGGCTCGATGCAGTATCGAGACCGGA CCCTACCTATTCCACTACCTAATCGAGAACGACGTCTGCTACCTGGTGAT GGTGGACAAGATGTACTCAAAGCGACTGGCCTTCAATTACCTGGAGGACC TGGCCCAGGAGTTCCATGCTAACTACGGCCGGCGAGTAAACTCAGTGACT CGCCCATACGCATTCATCGAGTTTGACGTGTACATACAGAAGGCGAAAAA ACAGTTGACGGACCGCAGACGCAACATCAGCAACATCAACACACAGCTGC AGGATGTGCAGCGCATCATGGTGCAAAACATTGACGACGTGCTCCAACGT GGCACAGTGCTGGCGGAACTCGACACCAAGACCCAGAACCTATCGATGAT GTCACAGAAGTACAAGAAGGACGCCAAGCTGCTCAACCGAAAGTCCATGT ACGTGAAGGCGATGGCCTTGGGCATGATACTTCTAGTGTTCATCATGTAT TTCTGGGTTCTGTAATATCAAGCAGTTCCATGGCCACTCGGAGCGGCGCG TTCTTTGTTGGAGTCAAGCGTCAAGGACGCAAGACCAAAAGACATTTAGA TTACGCGTGCACCTGTACTCCACGCCACCAACCACACCATATTCATTCAT ATCTATGAATCATAGGCAAGCGAAAAGTGAATAGCGAAACCCCCTACCAG CATACGCATCGCTCCCGAGGATTGTTTTACTTCTAATATTAACTTACCTT TGCGTTATTTACGGTCTGGGATTCCATTAATTATTAACTCCCATTTCATT TCGCCTCGCGCTTCCGTTGCGCAGGTTTTCTAAATATTTGATTACGAATC GGGTTTAGTTTAGACGACCTTTGAGCCAAGTCGGTTGACTACGACCCAAA TCTGTAAATTATGAGCGTCGATCCGTGTGTGTGTGTATAAATGTCTAGAT TGTAGATGGATCGCTGCATAGCGAATCCGAATCCGGCGGAGTGCTTGATA CAAGCTGCAAAAACACCGCAAAAAACAAAAGAAAAAGAAAAGATAACAAG CGAACCGAAAGAAAAGAAAAGAAGAGAAAGGGAAATAAACAATAACAGTT TTAGGCAATTTATATGTGTAAAATTAAGGCAAATAAATAAATTTATATTG TTTAATAAAGAGAAGGCAAAACTGTGTTCGATGCACTACCCAAGCCCGAA AGATAGAAACTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec22-RA | 1983 | Sec22-RA | 254..1967 | 1..1714 | 8570 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 701329..702176 | 866..1713 | 4225 | 99.9 | Plus |
chrX | 22417052 | chrX | 700082..700535 | 1..454 | 2255 | 99.8 | Plus |
chrX | 22417052 | chrX | 700945..701246 | 565..866 | 1495 | 99.7 | Plus |
chrX | 22417052 | chrX | 700606..700718 | 452..564 | 550 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 807353..808201 | 866..1714 | 4245 | 100 | Plus |
X | 23542271 | X | 806106..806559 | 1..454 | 2270 | 100 | Plus |
X | 23542271 | X | 806969..807270 | 565..866 | 1510 | 100 | Plus |
X | 23542271 | X | 806630..806742 | 452..564 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 815451..816299 | 866..1714 | 4245 | 100 | Plus |
X | 23527363 | X | 814204..814657 | 1..454 | 2270 | 100 | Plus |
X | 23527363 | X | 815067..815368 | 565..866 | 1510 | 100 | Plus |
X | 23527363 | X | 814728..814840 | 452..564 | 565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 700945..701246 | 565..866 | 99 | -> | Plus |
chrX | 700082..700535 | 1..454 | 99 | -> | Plus |
chrX | 700609..700718 | 455..564 | 99 | -> | Plus |
chrX | 701330..701984 | 867..1521 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7359-RA | 1..636 | 380..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec22-RA | 1..636 | 380..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec22-RA | 1..636 | 380..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7359-RA | 1..636 | 380..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec22-RA | 1..636 | 380..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7359-RA | 35..1747 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec22-RA | 35..1747 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec22-RA | 31..1743 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7359-RA | 35..1747 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec22-RA | 31..1743 | 1..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 806633..806742 | 455..564 | 100 | -> | Plus |
X | 806969..807270 | 565..866 | 100 | -> | Plus |
X | 806106..806559 | 1..454 | 100 | -> | Plus |
X | 807354..808200 | 867..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 806633..806742 | 455..564 | 100 | -> | Plus |
X | 806969..807270 | 565..866 | 100 | -> | Plus |
X | 806106..806559 | 1..454 | 100 | -> | Plus |
X | 807354..808200 | 867..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 806633..806742 | 455..564 | 100 | -> | Plus |
X | 806969..807270 | 565..866 | 100 | -> | Plus |
X | 806106..806559 | 1..454 | 100 | -> | Plus |
X | 807354..808200 | 867..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 700139..700592 | 1..454 | 100 | -> | Plus |
arm_X | 700666..700775 | 455..564 | 100 | -> | Plus |
arm_X | 701002..701303 | 565..866 | 100 | -> | Plus |
arm_X | 701387..702233 | 867..1713 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 814204..814657 | 1..454 | 100 | -> | Plus |
X | 814731..814840 | 455..564 | 100 | -> | Plus |
X | 815067..815368 | 565..866 | 100 | -> | Plus |
X | 815452..816298 | 867..1713 | 100 | Plus |
Translation from 379 to 1014
> LD45288.pep MALLTMIARVIDGLPLVGTMQDDEQSGRSILDYQNQAKMLFRKLGTHSPA RCSIETGPYLFHYLIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYG RRVNSVTRPYAFIEFDVYIQKAKKQLTDRRRNISNINTQLQDVQRIMVQN IDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKSMYVKAMALGMI LLVFIMYFWVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22107-PA | 211 | GF22107-PA | 1..211 | 1..211 | 1063 | 93.8 | Plus |
Dana\GF11075-PA | 218 | GF11075-PA | 48..202 | 57..207 | 168 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12812-PA | 211 | GG12812-PA | 1..211 | 1..211 | 1095 | 97.2 | Plus |
Dere\GG25257-PA | 218 | GG25257-PA | 24..202 | 32..207 | 182 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12353-PA | 211 | GH12353-PA | 1..211 | 1..211 | 1089 | 96.7 | Plus |
Dgri\GH21327-PA | 219 | GH21327-PA | 48..202 | 57..207 | 188 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec22-PA | 211 | CG7359-PA | 1..211 | 1..211 | 1075 | 100 | Plus |
Sec22-PB | 213 | CG7359-PB | 1..213 | 1..211 | 1062 | 99.1 | Plus |
Vamp7-PC | 218 | CG1599-PC | 35..202 | 43..207 | 191 | 28.4 | Plus |
Vamp7-PA | 218 | CG1599-PA | 35..202 | 43..207 | 191 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15600-PA | 211 | GI15600-PA | 1..211 | 1..211 | 1083 | 95.7 | Plus |
Dmoj\GI20745-PA | 219 | GI20745-PA | 35..184 | 43..191 | 177 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14202-PA | 211 | GL14202-PA | 1..211 | 1..211 | 1023 | 89.1 | Plus |
Dper\GL20026-PA | 218 | GL20026-PA | 35..186 | 43..193 | 174 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20293-PA | 211 | GA20293-PA | 1..211 | 1..211 | 1023 | 89.1 | Plus |
Dpse\GA14039-PA | 218 | GA14039-PA | 35..186 | 43..193 | 173 | 30.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19093-PA | 211 | GM19093-PA | 1..211 | 1..211 | 1122 | 99.5 | Plus |
Dsec\GM20575-PA | 218 | GM20575-PA | 24..202 | 32..207 | 183 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16531-PA | 211 | GD16531-PA | 1..211 | 1..211 | 1122 | 99.5 | Plus |
Dsim\GD10048-PA | 218 | GD10048-PA | 24..202 | 32..207 | 183 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15203-PA | 175 | GJ15203-PA | 1..164 | 1..164 | 850 | 96.3 | Plus |
Dvir\GJ20482-PA | 219 | GJ20482-PA | 19..184 | 27..191 | 162 | 25.7 | Plus |
Translation from 379 to 1014
> LD45288.hyp MALLTMIARVIDGLPLVGTMQDDEQSGRSILDYQNQAKMLFRKLGTHSPA RCSIETGPYLFHYLIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANYG RRVNSVTRPYAFIEFDVYIQKAKKQLTDRRRNISNINTQLQDVQRIMVQN IDDVLQRGTVLAELDTKTQNLSMMSQKYKKDAKLLNRKSMYVKAMALGMI LLVFIMYFWVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec22-PA | 211 | CG7359-PA | 1..211 | 1..211 | 1075 | 100 | Plus |
Sec22-PB | 213 | CG7359-PB | 1..213 | 1..211 | 1062 | 99.1 | Plus |
Vamp7-PC | 218 | CG1599-PC | 35..202 | 43..207 | 191 | 28.4 | Plus |
Vamp7-PA | 218 | CG1599-PA | 35..202 | 43..207 | 191 | 28.4 | Plus |