BDGP Sequence Production Resources |
Search the DGRC for LD45309
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 453 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1971-RB |
Protein status: | LD45309.pep: gold |
Sequenced Size: | 1051 |
Gene | Date | Evidence |
---|---|---|
CG1971 | 2002-11-15 | Blastp of sequenced clone |
CG1971 | 2008-04-29 | Release 5.5 accounting |
CG1971 | 2008-08-15 | Release 5.9 accounting |
CG1971 | 2008-12-18 | 5.12 accounting |
1051 bp (1051 high quality bases) assembled on 2002-11-15
GenBank Submission: BT003567
> LD45309.complete GTAAACTTACTCCTTCCTGATTTCCTCCCAGTCTTTCTAAGTAATTTCGA TGAAAAGGAGCAGGTGCGTCAACTCAGCTTATACCTTCACAACCTGCAAG ACCGTTTGCGGCAGGGCATTCAGGAGCACCAGAAGGTAATGCAGTCGTCG GTGCAGTTGCTCAAGGAGGTGGGCGATGTGAACGACATGATGCAGCTCGC GAGGTGTGGCCACCGCGCCGGGGCCTCCAAGATACAGCGACTGATCGTGG GTTTCGAGACGGTTAATGCTGTGAACGCCCCGCAAACCTCCGCCGTGGCG GGCATGAGTTTGCCTTCTGACCTCACCGAGATTCAAGGTCTATTGGTGGA ATTTGAGCACCTCAATGAAAGCCAAGTTCTGCGGGAGAGCCAGGAGAACT TCAAACGTGCCCGAGACTCACTGGAGAAGGTTCTCGGCTTTCTAGAGAAG ATTGGCAGCGAATCTTCACGGCCGTCTCCACAAGGAAGTCAGCTCTTTGG GTGTCCCAGTGCCAGCCGCAGCCTGCGCGAGAAGATCGAAGCATTCAACA AGGTCTTAGAGGCGGCCCCCGAGAAACTTGGGGATACCTGCCGTCATTTT AAGGAGTGCTTTTGTAGCTGCTGCACCTTGGACGAGTCCTTCCTGTCTAA AGGGCACAATCCCCTTCCCGTTGCCTCGAAAACAAATTCGGGCTACGAGG GGGACATAGACAGCGAGGTAGAGCAGCCGGAGCGGTCCAATAACGAATCG GGGGCGGATATAAGGGCCGATCGGTAAAAAATTGATATTGGTAAAGAGCA AGCTTTAAACACAATTAATACAAATTAGTTGCATTTAGGAGTATCTTTTC AATGCCTAGTAAGAATTTAAAGGACGATTATAGAAAAAATAAATTTTAGT TGGTATAAGAAAGATGTAAATCCGTCAAAACTACATATTAAACTTTAAAT AATATACAGGCAAAGGCACTATAATAATACCTCTTCAAATTAATATTTAA ATACAGAAAATTGATTTTCATATCAGAGATATATAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 27628094..27629127 | 1..1034 | 5155 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 31805736..31806771 | 1..1036 | 5180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 31546567..31547602 | 1..1036 | 5180 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 27628094..27629127 | 1..1034 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RA | 41..792 | 22..777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RA | 41..792 | 22..777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RA | 41..792 | 22..777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RA | 41..792 | 22..777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RA | 41..792 | 22..777 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RB | 1..1010 | 1..1010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RB | 73..1106 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RB | 73..1106 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RB | 1..1010 | 1..1010 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1971-RB | 73..1106 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31805736..31806769 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31805736..31806769 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31805736..31806769 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 27631458..27632491 | 1..1034 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 31546567..31547600 | 1..1034 | 100 | Plus |
Translation from 0 to 776
> LD45309.hyp VNLLLPDFLPVFLSNFDEKEQVRQLSLYLHNLQDRLRQGIQEHQKVMQSS VQLLKEVGDVNDMMQLARCGHRAGASKIQRLIVGFETVNAVNAPQTSAVA GMSLPSDLTEIQGLLVEFEHLNESQVLRESQENFKRARDSLEKVLGFLEK IGSESSRPSPQGSQLFGCPSASRSLREKIEAFNKVLEAAPEKLGDTCRHF KECFCSCCTLDESFLSKGHNPLPVASKTNSGYEGDIDSEVEQPERSNNES GADIRADR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1971-PA | 263 | CG1971-PA | 12..263 | 7..258 | 1277 | 98.8 | Plus |
CG1971-PD | 212 | CG1971-PD | 1..212 | 47..258 | 1084 | 100 | Plus |
CG1971-PC | 212 | CG1971-PC | 1..212 | 47..258 | 1084 | 100 | Plus |
CG1971-PB | 212 | CG1971-PB | 1..212 | 47..258 | 1084 | 100 | Plus |
Translation from 138 to 776
> LD45309.pep MQSSVQLLKEVGDVNDMMQLARCGHRAGASKIQRLIVGFETVNAVNAPQT SAVAGMSLPSDLTEIQGLLVEFEHLNESQVLRESQENFKRARDSLEKVLG FLEKIGSESSRPSPQGSQLFGCPSASRSLREKIEAFNKVLEAAPEKLGDT CRHFKECFCSCCTLDESFLSKGHNPLPVASKTNSGYEGDIDSEVEQPERS NNESGADIRADR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17491-PA | 265 | GF17491-PA | 54..245 | 2..195 | 608 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11835-PA | 259 | GG11835-PA | 52..258 | 1..207 | 870 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13761-PA | 243 | GH13761-PA | 47..239 | 1..201 | 263 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1971-PD | 212 | CG1971-PD | 1..212 | 1..212 | 1084 | 100 | Plus |
CG1971-PC | 212 | CG1971-PC | 1..212 | 1..212 | 1084 | 100 | Plus |
CG1971-PB | 212 | CG1971-PB | 1..212 | 1..212 | 1084 | 100 | Plus |
CG1971-PA | 263 | CG1971-PA | 52..263 | 1..212 | 1084 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\Tes130-PA | 184 | GI24815-PA | 1..174 | 11..195 | 221 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24027-PA | 286 | GL24027-PA | 62..282 | 1..198 | 252 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15163-PB | 250 | GA15163-PB | 25..246 | 1..198 | 256 | 35.2 | Plus |
Dpse\GA15163-PA | 287 | GA15163-PA | 62..281 | 1..196 | 256 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16456-PA | 237 | GM16456-PA | 29..236 | 1..207 | 956 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21607-PA | 263 | GD21607-PA | 52..263 | 1..212 | 1006 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24459-PA | 251 | GJ24459-PA | 47..238 | 1..198 | 326 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12159-PA | 258 | GK12159-PA | 62..248 | 1..198 | 388 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10969-PA | 255 | GE10969-PA | 52..249 | 1..198 | 854 | 83.8 | Plus |