BDGP Sequence Production Resources |
Search the DGRC for LD45317
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 453 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | Ice2-RA |
Protein status: | LD45317.pep: gold |
Preliminary Size: | 2619 |
Sequenced Size: | 2448 |
Gene | Date | Evidence |
---|---|---|
CG10825 | 2001-01-01 | Release 2 assignment |
CG10825 | 2001-11-29 | Blastp of sequenced clone |
CG10825 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10825 | 2008-04-29 | Release 5.5 accounting |
CG10825 | 2008-08-15 | Release 5.9 accounting |
CG10825 | 2008-12-18 | 5.12 accounting |
2448 bp (2448 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069681
> LD45317.complete CCAACAGGTTCCTAAATAAACGTTTCCTCATTTATTTTATTTACTTTTTA AAATATGCGAGCTTGAAATGGAAATATACCAAACATTATGCACTGCAGCT TATCAACCAATGAATAGACTTCGCTTTAGACACAAGTTCCTCCCGTAAAT ATAATAAACCAAAAACGTATTTGGAAAACTAAGTTTTCGAATGTTTTCAA TGGACTCTTTTGCCATGGACAAGGATGCGAAGTTGTACGAAGGAAATGCT CTATTCCGAAACCAGCCGTCGTACAAGGTGTTCAATAAATCCTTCGAGCA CGTGGACGATGCGCTGTACACATTGCTGAACGAAGTGGAGCCAGATGTAC TGCGAATGGAGCTCCAGGAAACGGGCGATCTCTTTAAGTCGTTCAATCGC AACTCGGCCTTGAGGGATCCGCGCAACAACGAGGTGCCACCGAAACCGAC TCGCGACCTCACCACCGCCAGTTCACTCTACAGCTTTCCCAATCCCCTGG AGCAATACTCGGAGCTGAATCTTAAGCAACAGGCCGCCTGCATGCGAGTG CTCCTCGCCTGGCAATGCAGTCAACCCGTCGATGAGCAGGACATCGTGGT GTGGCAGGCAACGGAAAAGAAGCGATACAACGAGCAGCAGCGTGTGCAGA AATACATACACGACCACGAGCAAGGACGCAAGGAAGTCATCTACGCGCCC ATGAAGAGCCTGGTGGCGGTCTACAGAAAGTGGTACGAACTGGGTGTTAA GAAACTTCAACAAACCTACCCCAATGACTCATATATGACCTTCTCCGGGC TGCCACAGCTGCCCCAGTGCAGGAGTCTCAATGCTCAGACCGCCAGCATA GAGCAGGTGGAGCTGGAGCGGATTGTCGGTCGGGTAAGACTCTTGCCAGA GGTGGAAGTTCGCCATGAAGCCCTGCGGACATTACGACTGCGCTTGGATC GCTATGCGACGAGAGAAACAAGGGCTCCTGTGCAGCTATTGCGGGAGGAA GACAAGGAACTGGAACTCGAAGCTGGCAACGTCTTCGTGCTGCCCCTAGA CTCGCTGTTAATGCTCCTTACCACCGGATCCTATATTGACCTGCCCACCG AAATGTTTCTCAGCCTAAGAGAATCGCCAAACAGCAAGCACAAGTGCATG GAGTTCCAGTCGCCATTCCCCCCCCGCAACTGTGGTTGGCATACGAACAG TTTGATCTTGAAACTGGCTTATGGAGCCTACATTTCACAGCCCGGACAAG CCAAGTGGCTGGATTTCAATATAAATGGAGCAGTCAAGGAGGTGCCAGAT GAGCCTGCCTGTGATAAGTCATCCATCGATCTGCAGATGGTCTACAAGCC TCGCGCAATCGATCAGCAACCATCAGACATTGAAGATGGCAACTGCAATA GCGCCTTGGTTAGTTGGACCCTTAGATGTAAAGGCGAAGGCGATGATTGC AACGATTTTCAAATCTTTAGCACACTATCCATACCAGCAGTTAAGGATTC CAGCGGCAAGGAACCACTTGGATGCCACTTCATTAAGCTGGAGAACAAGC CAGACTGCGGTTGCGAAATAATGTCCAAATACGAGTTGATAAGCGCCTGG GTGCAGTTAAAGCTAATGCGGGCAGAGATGGGACACTGCACACGCATCTC GCTACGGGATTTTGAGCCAATGCTGGAGGAGAAGCTGACGTTAATTTCGC TGGAGCAGCAGCTTCATGACTATTATAACACAAGTATGCCGCAGCTACTG TCCAACTTGTGTGAGTTTTTGAAGCTGCTGGACACGGTACCCGCTGGAGA TTACCTGCTGCGATACTCACCCAAGTACAAGGATAAGTTCCTGCTGTGCA TTGTCACCAAGGAGGCCACGCCACAGAGTTTTCAGCTACACCAGCTCCTC ACGGAATCCATCCCCAGCGACCAAGCCTTCCTTACGCAAAGCAGCTACCT TCCGATCTCGCCCACTCTTTGTGGCCGCCTGCACGAGGAGCTCCATCTAC TGCCCTGTGCATTTCCAGCAAAAGCCAACGGTCGCTCTGTCCAGCGTCGA AAGGTGGTGGTGCCCATACCAGAGCCCTCCAGACAAGCTCCAGTAAGACG GCAACGTTTAAAAAAGTGGAGCGAAGCCCAAACTCGAGAATTTCGACGTC GATGTAAGGTGGATCAAAAGAAAAGAGCTCGGGCTCGCAAGACAGCAGCG GCCAACAAAGAAAAAATAGAGCTGGAGAAGATTATGACGTTGTAAAAACC GCACTCTGATTGCATAAGTTGATTACTATTAGGGATGTAGTTACTAACTG TTACAAAACCAAAAGGTGATCCCCATAGTGGAGTTAACCGCTCGGCGTAA GGATAAGAGTTAAGTTTATATTGTTATGTATCGGAATAATAAAAATTGAA CGCGGTGCTTGTGGCGCGAGCAACAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10825-RA | 2427 | CG10825-RA | 1..2427 | 1..2427 | 12135 | 100 | Plus |
CG10825-RB | 2394 | CG10825-RB | 180..2383 | 224..2427 | 11020 | 100 | Plus |
CG10825-RC | 2347 | CG10825-RC | 688..2307 | 808..2427 | 8100 | 100 | Plus |
CG10825-RC | 2347 | CG10825-RC | 180..688 | 224..732 | 2545 | 100 | Plus |
CG10825-RB | 2394 | CG10825-RB | 36..180 | 1..145 | 725 | 100 | Plus |
CG10825-RC | 2347 | CG10825-RC | 36..180 | 1..145 | 725 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 16954102..16956525 | 1..2424 | 11655 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21130254..21132680 | 1..2427 | 12135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20871085..20873511 | 1..2427 | 12135 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 753..814 | 662..600 | 123 | 70.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 16954102..16956525 | 1..2424 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RA | 1..2055 | 191..2245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RA | 1..2055 | 191..2245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RA | 1..2055 | 191..2245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RA | 1..2055 | 191..2245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RA | 1..2055 | 191..2245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RA | 1..2424 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RA | 1..2424 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RA | 1..2424 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10825-RA | 1..2424 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ice2-RA | 39..2462 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21130254..21132677 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21130254..21132677 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21130254..21132677 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 16955976..16958399 | 1..2424 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20871085..20873508 | 1..2424 | 100 | Plus |
Translation from 190 to 2244
> LD45317.hyp MFSMDSFAMDKDAKLYEGNALFRNQPSYKVFNKSFEHVDDALYTLLNEVE PDVLRMELQETGDLFKSFNRNSALRDPRNNEVPPKPTRDLTTASSLYSFP NPLEQYSELNLKQQAACMRVLLAWQCSQPVDEQDIVVWQATEKKRYNEQQ RVQKYIHDHEQGRKEVIYAPMKSLVAVYRKWYELGVKKLQQTYPNDSYMT FSGLPQLPQCRSLNAQTASIEQVELERIVGRVRLLPEVEVRHEALRTLRL RLDRYATRETRAPVQLLREEDKELELEAGNVFVLPLDSLLMLLTTGSYID LPTEMFLSLRESPNSKHKCMEFQSPFPPRNCGWHTNSLILKLAYGAYISQ PGQAKWLDFNINGAVKEVPDEPACDKSSIDLQMVYKPRAIDQQPSDIEDG NCNSALVSWTLRCKGEGDDCNDFQIFSTLSIPAVKDSSGKEPLGCHFIKL ENKPDCGCEIMSKYELISAWVQLKLMRAEMGHCTRISLRDFEPMLEEKLT LISLEQQLHDYYNTSMPQLLSNLCEFLKLLDTVPAGDYLLRYSPKYKDKF LLCIVTKEATPQSFQLHQLLTESIPSDQAFLTQSSYLPISPTLCGRLHEE LHLLPCAFPAKANGRSVQRRKVVVPIPEPSRQAPVRRQRLKKWSEAQTRE FRRRCKVDQKKRARARKTAAANKEKIELEKIMTL*
Translation from 190 to 2244
> LD45317.pep MFSMDSFAMDKDAKLYEGNALFRNQPSYKVFNKSFEHVDDALYTLLNEVE PDVLRMELQETGDLFKSFNRNSALRDPRNNEVPPKPTRDLTTASSLYSFP NPLEQYSELNLKQQAACMRVLLAWQCSQPVDEQDIVVWQATEKKRYNEQQ RVQKYIHDHEQGRKEVIYAPMKSLVAVYRKWYELGVKKLQQTYPNDSYMT FSGLPQLPQCRSLNAQTASIEQVELERIVGRVRLLPEVEVRHEALRTLRL RLDRYATRETRAPVQLLREEDKELELEAGNVFVLPLDSLLMLLTTGSYID LPTEMFLSLRESPNSKHKCMEFQSPFPPRNCGWHTNSLILKLAYGAYISQ PGQAKWLDFNINGAVKEVPDEPACDKSSIDLQMVYKPRAIDQQPSDIEDG NCNSALVSWTLRCKGEGDDCNDFQIFSTLSIPAVKDSSGKEPLGCHFIKL ENKPDCGCEIMSKYELISAWVQLKLMRAEMGHCTRISLRDFEPMLEEKLT LISLEQQLHDYYNTSMPQLLSNLCEFLKLLDTVPAGDYLLRYSPKYKDKF LLCIVTKEATPQSFQLHQLLTESIPSDQAFLTQSSYLPISPTLCGRLHEE LHLLPCAFPAKANGRSVQRRKVVVPIPEPSRQAPVRRQRLKKWSEAQTRE FRRRCKVDQKKRARARKTAAANKEKIELEKIMTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16500-PA | 667 | GF16500-PA | 2..667 | 12..684 | 2035 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24399-PA | 678 | GG24399-PA | 4..678 | 10..684 | 3066 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17292-PA | 659 | GH17292-PA | 4..607 | 14..621 | 1564 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ice2-PA | 684 | CG10825-PA | 1..684 | 1..684 | 3584 | 100 | Plus |
Ice2-PC | 394 | CG10825-PC | 1..394 | 291..684 | 2086 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23872-PA | 669 | GI23872-PA | 2..669 | 12..684 | 1420 | 46 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12008-PA | 669 | GL12008-PA | 5..669 | 15..684 | 2006 | 56.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10581-PA | 669 | GA10581-PA | 5..669 | 15..684 | 1997 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15068-PA | 675 | GM15068-PA | 1..675 | 9..684 | 3179 | 92.6 | Plus |
Dsec\GM13639-PA | 403 | GM13639-PA | 1..399 | 1..399 | 1849 | 92 | Plus |
Dsec\GM13640-PA | 223 | GM13640-PA | 1..223 | 461..684 | 1024 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19400-PA | 676 | GD19400-PA | 1..676 | 9..684 | 3222 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23962-PA | 671 | GJ23962-PA | 2..671 | 12..684 | 1474 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19181-PA | 621 | GK19181-PA | 1..621 | 64..684 | 1136 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25710-PA | 676 | GE25710-PA | 1..676 | 9..684 | 3167 | 88 | Plus |