BDGP Sequence Production Resources |
Search the DGRC for LD45324
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 453 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | Prx5-RA |
Protein status: | LD45324.pep: gold |
Preliminary Size: | 840 |
Sequenced Size: | 712 |
Gene | Date | Evidence |
---|---|---|
CG7217 | 2001-01-01 | Release 2 assignment |
CG32920 | 2001-07-04 | Blastp of sequenced clone |
CG32920 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7217 | 2008-04-29 | Release 5.5 accounting |
CG7215 | 2008-08-15 | Release 5.9 accounting |
CG7217 | 2008-08-15 | Release 5.9 accounting |
CG7217 | 2008-12-18 | 5.12 accounting |
CG7215 | 2008-12-18 | 5.12 accounting |
712 bp (712 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051983
> LD45324.complete AGAAATGCGTGTGCTGTCGTGCAAATTTCTTGGCCGAGTTGTTAACTCCG CGCTGCCCCAACAAATCATTTCACTGCGATCCCTGTCCAAAACCAGTGCA GCTATGGTGAAAGTAGGAGACTCCCTGCCATCGGTGGATCTGTTCGAGGA CTCGCCAGCCAACAAAATCAACACCGGCGATCTCGTCAATGGCAAGAAGG TGATCATCTTCGGCGTTCCCGGCGCCTTCACTCCAGGCTGCTCAAAGACC CACTTGCCCGGCTATGTGAGCTCCGCCGATGAGCTGAAGTCCAAGCAGGG CGTGGACGAGATTGTCTGCGTTTCGGTCAACGATCCCTTTGTGATGTCCG CCTGGGGCAAGGAGCACGGAGCCGCGGGCAAGGTGCGCCTCCTAGCTGAT CCCGCCGGCGGTTTCACCAAGGCCCTGGATGTGACCATCGATCTGCCACC ACTTGGCGGCGTGCGCTCAAAGCGCTACTCGCTGGTGGTGGAGAACGGCA AGGTGACCGAGCTGAATGTCGAGCCCGATGGCACCGGACTCAGCTGCTCG CTGGCCAACAACATTGGCAAGAAGTAAATGGAATCCAGTCAGCCCGAAAA CACTAGAAACTCATACATGCTAATGCTAGGCCGCAATGATATCAATTACG TCTTCAAAAGAACTATGTAAAACGTACAATATATATGCGATTAGAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 13989815..13990263 | 694..246 | 2245 | 100 | Minus |
chr3R | 27901430 | chr3R | 13990392..13990526 | 247..113 | 675 | 100 | Minus |
chr3R | 27901430 | chr3R | 13990718..13990832 | 115..1 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18165448..18165897 | 695..246 | 2250 | 100 | Minus |
3R | 32079331 | 3R | 18166026..18166160 | 247..113 | 675 | 100 | Minus |
3R | 32079331 | 3R | 18166352..18166466 | 115..1 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17906279..17906728 | 695..246 | 2250 | 100 | Minus |
3R | 31820162 | 3R | 17906857..17906991 | 247..113 | 675 | 100 | Minus |
3R | 31820162 | 3R | 17907183..17907297 | 115..1 | 575 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13989815..13990261 | 248..694 | 100 | <- | Minus |
chr3R | 13990392..13990526 | 113..247 | 100 | <- | Minus |
chr3R | 13990721..13990832 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7217-RB | 1..573 | 5..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5-RB | 1..573 | 5..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5-RA | 1..573 | 5..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7217-RB | 1..573 | 5..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5-RA | 1..573 | 5..577 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7215-RA | 721..1414 | 1..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5-RB | 56..749 | 1..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7215-RA | 749..1442 | 1..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7215-RA | 721..1414 | 1..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5-RA | 749..1442 | 1..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18165449..18165895 | 248..694 | 100 | <- | Minus |
3R | 18166026..18166160 | 113..247 | 100 | <- | Minus |
3R | 18166355..18166466 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18165449..18165895 | 248..694 | 100 | <- | Minus |
3R | 18166026..18166160 | 113..247 | 100 | <- | Minus |
3R | 18166355..18166466 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18165449..18165895 | 248..694 | 100 | <- | Minus |
3R | 18166026..18166160 | 113..247 | 100 | <- | Minus |
3R | 18166355..18166466 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13991171..13991617 | 248..694 | 100 | <- | Minus |
arm_3R | 13991748..13991882 | 113..247 | 100 | <- | Minus |
arm_3R | 13992077..13992188 | 1..112 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17906280..17906726 | 248..694 | 100 | <- | Minus |
3R | 17906857..17906991 | 113..247 | 100 | <- | Minus |
3R | 17907186..17907297 | 1..112 | 100 | Minus |
Translation from 0 to 576
> LD45324.hyp EMRVLSCKFLGRVVNSALPQQIISLRSLSKTSAAMVKVGDSLPSVDLFED SPANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSKQG VDEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPP LGGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK*
Translation from 4 to 576
> LD45324.pep MRVLSCKFLGRVVNSALPQQIISLRSLSKTSAAMVKVGDSLPSVDLFEDS PANKINTGDLVNGKKVIIFGVPGAFTPGCSKTHLPGYVSSADELKSKQGV DEIVCVSVNDPFVMSAWGKEHGAAGKVRLLADPAGGFTKALDVTIDLPPL GGVRSKRYSLVVENGKVTELNVEPDGTGLSCSLANNIGKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18245-PA | 157 | GF18245-PA | 1..157 | 34..190 | 807 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16729-PA | 190 | GG16729-PA | 1..190 | 1..190 | 977 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17340-PA | 157 | GH17340-PA | 1..157 | 34..190 | 734 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prx5-PB | 190 | CG7217-PB | 1..190 | 1..190 | 969 | 100 | Plus |
Prx5-PA | 190 | CG7217-PA | 1..190 | 1..190 | 969 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23880-PA | 157 | GI23880-PA | 1..157 | 34..190 | 735 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12016-PA | 189 | GL12016-PA | 1..189 | 1..190 | 882 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26161-PA | 189 | GA26161-PA | 1..189 | 1..190 | 882 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15327-PA | 190 | GM15327-PA | 1..190 | 1..190 | 974 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20203-PA | 190 | GD20203-PA | 1..190 | 1..190 | 980 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23970-PA | 184 | GJ23970-PA | 3..184 | 5..190 | 779 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11833-PA | 185 | GK11833-PA | 1..185 | 4..190 | 821 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25237-PA | 190 | GE25237-PA | 1..190 | 1..190 | 965 | 97.9 | Plus |