Clone LD45365 Report

Search the DGRC for LD45365

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:453
Well:65
Vector:pOT2
Associated Gene/TranscriptPOSH-RA
Protein status:LD45365.pep: gold
Preliminary Size:3186
Sequenced Size:3149

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4909 2001-01-01 Release 2 assignment
CG4909 2001-07-04 Blastp of sequenced clone
CG4909 2003-01-01 Sim4 clustering to Release 3
POSH 2008-04-29 Release 5.5 accounting
POSH 2008-08-15 Release 5.9 accounting
POSH 2008-12-18 5.12 accounting

Clone Sequence Records

LD45365.complete Sequence

3149 bp (3149 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051984

> LD45365.complete
CATTTGTATCCGCTTGGCCACGAGCTTTGGCTGCACTTGGCAAACTTAAT
AAATTAAACATTGAATCCTGCCTATTGCAACGATAATATAATCTGATTTA
GTGCATTAAGAACGACAAGTAGCGATTATAATAGTAGATTTTAGCATTTG
AGCTAAATTTATTTCCCAACCGCGTCTTGGGATTGCGTATGCGTGAGCCA
GTACCTGCATGTGTGTGTGTTTTGGAATGTGGCCCTGCACGAAATTCAAA
TAGTGACCATCCTTGAGATTTTGCATACTGGCAAGATGGACGAGCACACG
TTAAACGACCTGTTGGAGTGCTCCGTGTGTCTTGAGCGACTGGACACCAC
ATCGAAGGTGCTGCCATGCCAGCACACCTTCTGCCGCAAATGCTTGCAGG
ACATTGTGGCCAGTCAGCACAAGTTGCGATGCCCGGAGTGCCGCATCCTG
GTCTCTTGCAAAATTGATGAGCTGCCTCCAAACGTCTTGCTGATGCGAAT
CTTAGAAGGCATGAAACAAAATGCAGCAGCTGGCAAAGGAGAAGAAAAGG
GAGAGGAGACTGAAACACAGCCGGAAAGGGCCAAACCTCAGCCGCCAGCG
GAATCAGTGGCCCCGCCTGACAACCAACTACTCCAGCTGCAGTCACATCA
GCAATCTCATCAGCCGGCTCGTCACAAGCAACGTCGATTTCTACTCCCCC
ACGCCTATGCCCTCTTTGACTTCGCCTCCGGTGAAGCCACCGATCTAAAG
TTCAAGAAAGGGGATCTGATACTGATCAAGCATCGCATCGACAACAACTG
GTTTGTGGGTCAAGCGAATGGTCAGGAGGGCACATTTCCCATCAACTACG
TCAAGGTATCGGTTCCGCTGCCCATGCCGCAGTGCATTGCCATGTATGAC
TTTAAGATGGGGCCCAACGACGAGGAGGGATGCCTCGAATTTAAGAAAAG
CACTGTAATACAGGTAATGCGCCGAGTTGATCATAATTGGGCAGAAGGAC
GAATTGGCCAGACCATCGGAATCTTTCCAATAGCATTCGTTGAGCTGAAT
GCAGCGGCCAAAAAGCTGTTGGACAGCGGGCTACACACCCATCCATTCTG
CCATCCACCGAAGCAACAGGGGCAGCGGGCCCTTCCTCCGGTTCCAGTTA
TTGATCCCACGGTGGTCACGGAATCCAGTTCGGGATCCTCCAATTCCACG
CCGGGCAGCAGCAATTCAAGCTCCACATCCAGCTCGAATAACTGCAGTCC
GAATCACCAAATCTCACTGCCGAATACCCCCCAACATGTAGTAGCTTCCG
GATCGGCGTCTGTTCGTTTCCGTGACAAGGGAGCAAAGGAGAAACGCCAC
TCACTAAATGCTTTGCTGGGAGGAGGAGCTCCATTAAGTCTGCTGCAGAC
CAACCGCCATTCGGCTGAAATTCTTAGCCTGCCCCATGAACTAAGCCGCT
TGGAAGTTTCCAGCTCAACAGCTCTAAAACCCACGTCAGCCCCACAGACA
TCGCGTGTACTTAAGACCACTGTTCAGCAGCAGATGCAACCGAATTTACC
CTGGGGATACTTAGCCCTGTTCCCATACAAACCACGCCAAACGGATGAGC
TGGAATTAAAAAAGGGTTGTGTTTACATTGTGACCGAACGATGTGTGGAC
GGTTGGTTCAAGGGAAAAAACTGGTTGGACATCACTGGAGTGTTCCCGGG
CAACTACCTGACGCCCCTGCGCGCCCGCGACCAGCAGCAGTTAATGCATC
AATGGAAATATGTTCCCCAAAATGCAGACGCCCAGATGGCACAAGTACAG
CAGCATCCAGTTGCACCAGATGTGCGACTCAACAACATGCTGTCCATGCA
ACCGCCTGATTTGCCACCTCGTCAGCAGCAGGCTACCGCCACGACCACCA
GTTGCTCTGTGTGGTCGAAACCAGTGGAGGCGCTGTTCAGCAGAAAATCG
GAGCCCAAGCCTGAAACTGCCACAGCTTCGACTACGAGCAGCAGTTCCTC
TGGAGCAGTGGGACTTATGAGGAGATTAACTCACATGAAAACACGCTCCA
AATCTCCGGGAGCGTCCTTGCAGCAAGTTCCGAAAGAAGCTATTAGCACA
AATGTGGAATTTACAACAAACCCATCAGCTAAATTGCATCCAGTACATGT
AAGATCCGGCTCGTGCCCCAGTCAGCTGCAGCACAGTCAACCGCTCAATG
AAACTCCAGCAGCCAAGACAGCGGCACAACAACAGCAGTTCCTACCCAAG
CAGCTGCCTTCCGCTTCTACGAACAGCGTTTCGTACGGATCGCAACGCGT
GAAAGGAAGCAAGGAACGTCCTCACTTGATTTGCGCGAGACAATCATTAG
ATGCAGCTACATTTCGCAGTATGTACAACAATGCCGCGTCGCCGCCGCCA
CCTACTACTTCCGTGGCCCCAGCTGTCTACGCCGGCGGTCAGCAACAGGT
GATTCCTGGAGGTGGAGCGCAATCCCAGTTGCATGCCAATATGATTATTG
CACCCAGCCATCGGAAGTCGCACAGCCTAGATGCGAGTCATGTGCTGAGT
CCCAGCAGCAATATGATCACGGAGGCGGCCATTAAGGCCAGCGCCACCAC
TAAGTCTCCTTACTGCACGAGGGAAAGTCGATTCCGCTGCATTGTGCCGT
ATCCACCAAACAGTGACATTGAACTAGAGCTACATTTGGGCGACATTATC
TACGTCCAGCGGAAGCAGAAGAACGGCTGGTATAAGGGCACCCATGCCCG
TACCCACAAAACCGGGCTGTTCCCCGCCTCCTTTGTTGAACCGGATTGTT
AGGAAAGTTATGGTTCAAACTAGAATTTATTAAGCGAAATTCCAAATTAC
TTGTCTAAAAGGATTCAATCGTCGGTCTATTCGGGCTTCCAAATACGCAA
TCTCATATTTCTCTTTTCAAAAAAGAAACCGTTTTGTACTCTTCCAATCG
AATGGGCAGCTCGCCGTTGTACTTTTTTATACAATGCTTGATCAAAATAG
GCTAGCCATGTAAGACTTAGGGAACAGTTACTTAAGCCTTAGCGATTAGT
TAGCTAGAGAAATAATCTAACCGATCCTTGTGCCCTCTACAAAGTTATTT
GTAATATACGATACTCAGTAATAAAAAAAAAAAAAAAAAAAAAAAAAAA

LD45365.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
POSH-RA 3203 POSH-RA 82..3203 1..3122 15610 100 Plus
CG14482.a 552 CG14482.a 325..552 3123..2896 1140 100 Minus
CG14482-RA 411 CG14482-RA 356..411 3123..3068 280 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 13456579..13458225 507..2153 8205 99.9 Plus
chr2R 21145070 chr2R 13458885..13459381 2626..3122 2470 99.8 Plus
chr2R 21145070 chr2R 13455838..13456237 1..400 2000 100 Plus
chr2R 21145070 chr2R 13458531..13458825 2333..2627 1475 100 Plus
chr2R 21145070 chr2R 13458291..13458472 2152..2333 910 100 Plus
chr2R 21145070 chr2R 13456302..13456414 397..509 565 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:41:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17569520..17571166 507..2153 8235 100 Plus
2R 25286936 2R 17571826..17572323 2626..3123 2490 100 Plus
2R 25286936 2R 17568779..17569178 1..400 2000 100 Plus
2R 25286936 2R 17571472..17571766 2333..2627 1475 100 Plus
2R 25286936 2R 17571232..17571413 2152..2333 910 100 Plus
2R 25286936 2R 17569243..17569355 397..509 565 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 17570719..17572365 507..2153 8235 100 Plus
2R 25260384 2R 17573025..17573522 2626..3123 2490 100 Plus
2R 25260384 2R 17569978..17570377 1..400 2000 100 Plus
2R 25260384 2R 17572671..17572965 2333..2627 1475 100 Plus
2R 25260384 2R 17572431..17572612 2152..2333 910 100 Plus
2R 25260384 2R 17570442..17570554 397..509 565 100 Plus
Blast to na_te.dros performed on 2019-03-16 11:08:00 has no hits.

LD45365.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:08:40 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 13455838..13456236 1..399 100 -> Plus
chr2R 13456305..13456413 400..508 100 -> Plus
chr2R 13456581..13458225 509..2153 99 -> Plus
chr2R 13458293..13458472 2154..2333 100 -> Plus
chr2R 13458532..13458825 2334..2627 100 -> Plus
chr2R 13458887..13459381 2628..3122 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:28:47 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 1..2517 286..2802 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:15:42 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 1..2517 286..2802 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:59:05 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 1..2517 286..2802 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:47:06 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 1..2517 286..2802 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:28:05 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 1..2517 286..2802 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:09:35 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 42..3163 1..3122 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:15:42 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 42..3163 1..3122 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:59:05 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 48..3169 1..3122 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:47:07 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 42..3163 1..3122 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:28:05 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
POSH-RA 48..3169 1..3122 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:40 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17571234..17571413 2154..2333 100 -> Plus
2R 17571473..17571766 2334..2627 100 -> Plus
2R 17569522..17571166 509..2153 100 -> Plus
2R 17568779..17569177 1..399 100 -> Plus
2R 17569246..17569354 400..508 100 -> Plus
2R 17571828..17572322 2628..3122 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:40 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17571234..17571413 2154..2333 100 -> Plus
2R 17571473..17571766 2334..2627 100 -> Plus
2R 17569522..17571166 509..2153 100 -> Plus
2R 17568779..17569177 1..399 100 -> Plus
2R 17569246..17569354 400..508 100 -> Plus
2R 17571828..17572322 2628..3122 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:08:40 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17571234..17571413 2154..2333 100 -> Plus
2R 17571473..17571766 2334..2627 100 -> Plus
2R 17569522..17571166 509..2153 100 -> Plus
2R 17568779..17569177 1..399 100 -> Plus
2R 17569246..17569354 400..508 100 -> Plus
2R 17571828..17572322 2628..3122 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:59:05 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13456284..13456682 1..399 100 -> Plus
arm_2R 13456751..13456859 400..508 100 -> Plus
arm_2R 13457027..13458671 509..2153 100 -> Plus
arm_2R 13458739..13458918 2154..2333 100 -> Plus
arm_2R 13458978..13459271 2334..2627 100 -> Plus
arm_2R 13459333..13459827 2628..3122 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:25:03 Download gff for LD45365.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17570445..17570553 400..508 100 -> Plus
2R 17569978..17570376 1..399 100 -> Plus
2R 17570721..17572365 509..2153 100 -> Plus
2R 17572433..17572612 2154..2333 100 -> Plus
2R 17572672..17572965 2334..2627 100 -> Plus
2R 17573027..17573521 2628..3122 100   Plus

LD45365.pep Sequence

Translation from 285 to 2801

> LD45365.pep
MDEHTLNDLLECSVCLERLDTTSKVLPCQHTFCRKCLQDIVASQHKLRCP
ECRILVSCKIDELPPNVLLMRILEGMKQNAAAGKGEEKGEETETQPERAK
PQPPAESVAPPDNQLLQLQSHQQSHQPARHKQRRFLLPHAYALFDFASGE
ATDLKFKKGDLILIKHRIDNNWFVGQANGQEGTFPINYVKVSVPLPMPQC
IAMYDFKMGPNDEEGCLEFKKSTVIQVMRRVDHNWAEGRIGQTIGIFPIA
FVELNAAAKKLLDSGLHTHPFCHPPKQQGQRALPPVPVIDPTVVTESSSG
SSNSTPGSSNSSSTSSSNNCSPNHQISLPNTPQHVVASGSASVRFRDKGA
KEKRHSLNALLGGGAPLSLLQTNRHSAEILSLPHELSRLEVSSSTALKPT
SAPQTSRVLKTTVQQQMQPNLPWGYLALFPYKPRQTDELELKKGCVYIVT
ERCVDGWFKGKNWLDITGVFPGNYLTPLRARDQQQLMHQWKYVPQNADAQ
MAQVQQHPVAPDVRLNNMLSMQPPDLPPRQQQATATTTSCSVWSKPVEAL
FSRKSEPKPETATASTTSSSSSGAVGLMRRLTHMKTRSKSPGASLQQVPK
EAISTNVEFTTNPSAKLHPVHVRSGSCPSQLQHSQPLNETPAAKTAAQQQ
QFLPKQLPSASTNSVSYGSQRVKGSKERPHLICARQSLDAATFRSMYNNA
ASPPPPTTSVAPAVYAGGQQQVIPGGGAQSQLHANMIIAPSHRKSHSLDA
SHVLSPSSNMITEAAIKASATTKSPYCTRESRFRCIVPYPPNSDIELELH
LGDIIYVQRKQKNGWYKGTHARTHKTGLFPASFVEPDC*

LD45365.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:17:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11645-PA 843 GF11645-PA 1..842 1..837 3270 80.6 Plus
Dana\GF12790-PA 3908 GF12790-PA 3657..3777 140..254 234 37.1 Plus
Dana\GF23220-PA 369 GF23220-PA 314..368 142..196 154 47.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21801-PA 837 GG21801-PA 1..837 1..838 3853 94.2 Plus
Dere\GG24159-PA 4031 GG24159-PA 3779..3899 140..254 225 37.1 Plus
Dere\GG16530-PA 598 GG16530-PA 450..589 136..253 175 28 Plus
Dere\endoA-PA 369 GG23082-PA 312..366 142..196 157 49.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:17:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20925-PA 871 GH20925-PA 1..870 1..837 2699 67.7 Plus
Dgri\GH21781-PA 2098 GH21781-PA 1846..2095 140..475 280 27.3 Plus
Dgri\GH22281-PA 628 GH22281-PA 485..619 137..253 167 28.3 Plus
Dgri\GH18864-PA 369 GH18864-PA 303..366 130..196 154 43.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:42:23
Subject Length Description Subject Range Query Range Score Percent Strand
POSH-PA 838 CG4909-PA 1..838 1..838 4417 100 Plus
CAP-PN 313 CG18408-PN 61..181 140..254 196 37.1 Plus
CAP-PE 313 CG18408-PE 61..181 140..254 196 37.1 Plus
CAP-PG 500 CG18408-PG 248..368 140..254 196 37.1 Plus
CAP-PH 500 CG18408-PH 248..368 140..254 196 37.1 Plus
CAP-PD 527 CG18408-PD 275..395 140..254 196 37.1 Plus
CAP-PS 554 CG18408-PS 302..422 140..254 196 37.1 Plus
CAP-PJ 565 CG18408-PJ 313..433 140..254 196 37.1 Plus
CAP-PO 630 CG18408-PO 378..498 140..254 196 37.1 Plus
CAP-PK 630 CG18408-PK 378..498 140..254 196 37.1 Plus
CAP-PI 639 CG18408-PI 387..507 140..254 196 37.1 Plus
CAP-PU 674 CG18408-PU 422..542 140..254 196 37.1 Plus
CAP-PF 811 CG18408-PF 559..679 140..254 196 37.1 Plus
CAP-PC 824 CG18408-PC 572..692 140..254 196 37.1 Plus
CAP-PW 1586 CG18408-PW 1334..1454 140..254 196 37.1 Plus
CAP-PB 1734 CG18408-PB 1482..1602 140..254 196 37.1 Plus
CAP-PR 1743 CG18408-PR 1491..1611 140..254 196 37.1 Plus
CAP-PL 2365 CG18408-PL 2113..2233 140..254 196 37.1 Plus
CAP-PA 2376 CG18408-PA 2124..2244 140..254 196 37.1 Plus
CAP-PY 2409 CG18408-PY 2157..2277 140..254 196 37.1 Plus
CAP-PQ 2412 CG18408-PQ 2160..2280 140..254 196 37.1 Plus
CAP-PV 2458 CG18408-PV 2206..2326 140..254 196 37.1 Plus
CAP-PX 2505 CG18408-PX 2253..2373 140..254 196 37.1 Plus
l(3)05822-PD 600 CG7129-PD 400..591 89..253 169 27.4 Plus
l(3)05822-PC 600 CG7129-PC 400..591 89..253 169 27.4 Plus
l(3)05822-PB 600 CG7129-PB 400..591 89..253 169 27.4 Plus
l(3)05822-PA 600 CG7129-PA 400..591 89..253 169 27.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:17:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18363-PA 853 GI18363-PA 1..852 1..837 2769 68.1 Plus
Dmoj\GI19327-PA 582 GI19327-PA 330..450 140..254 212 35.5 Plus
Dmoj\GI22969-PA 367 GI22969-PA 303..366 130..196 155 43.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:17:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11468-PA 858 GL11468-PA 1..857 1..837 3263 79.8 Plus
Dper\GL10458-PA 808 GL10458-PA 556..676 140..254 217 36.3 Plus
Dper\GL23440-PA 369 GL23440-PA 302..366 127..196 156 42.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:17:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18517-PA 858 GA18517-PA 1..857 1..837 3267 80 Plus
Dpse\GA24375-PA 2179 GA24375-PA 1927..2047 140..254 229 37.1 Plus
Dpse\endoA-PA 369 GA12885-PA 302..366 127..196 156 42.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:17:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21803-PA 838 GM21803-PA 1..837 1..837 4371 97.1 Plus
Dsec\GM21208-PA 534 GM21208-PA 282..402 140..254 213 37.1 Plus
Dsec\GM15306-PA 587 GM15306-PA 439..578 136..253 183 28.7 Plus
Dsec\GM17895-PA 369 GM17895-PA 312..366 142..196 157 49.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:17:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11292-PA 839 GD11292-PA 1..839 1..838 4395 97.6 Plus
Dsim\GD10731-PA 543 GD10731-PA 291..411 140..254 214 37.1 Plus
Dsim\GD20184-PA 599 GD20184-PA 451..590 136..253 182 28.7 Plus
Dsim\GD19255-PA 369 GD19255-PA 312..366 142..196 157 49.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:17:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21432-PA 857 GJ21432-PA 1..856 1..837 2792 70 Plus
Dvir\GJ22205-PA 1170 GJ22205-PA 918..1038 140..254 219 36.3 Plus
Dvir\GJ22708-PA 700 GJ22708-PA 556..691 138..253 175 29.1 Plus
Dvir\endoA-PA 369 GJ14546-PA 302..366 127..196 153 42.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:17:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21903-PA 835 GK21903-PA 1..834 1..837 2947 72.1 Plus
Dwil\GK17791-PA 2259 GK17791-PA 2006..2126 140..254 228 37.1 Plus
Dwil\GK22394-PA 617 GK22394-PA 477..608 137..253 177 31.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:17:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11877-PA 837 GE11877-PA 1..837 1..838 3865 93.2 Plus
Dyak\GE19353-PA 2104 GE19353-PA 1852..1972 140..254 223 37.1 Plus
Dyak\GE25564-PA 369 GE25564-PA 312..366 142..196 157 49.1 Plus

LD45365.hyp Sequence

Translation from 285 to 2801

> LD45365.hyp
MDEHTLNDLLECSVCLERLDTTSKVLPCQHTFCRKCLQDIVASQHKLRCP
ECRILVSCKIDELPPNVLLMRILEGMKQNAAAGKGEEKGEETETQPERAK
PQPPAESVAPPDNQLLQLQSHQQSHQPARHKQRRFLLPHAYALFDFASGE
ATDLKFKKGDLILIKHRIDNNWFVGQANGQEGTFPINYVKVSVPLPMPQC
IAMYDFKMGPNDEEGCLEFKKSTVIQVMRRVDHNWAEGRIGQTIGIFPIA
FVELNAAAKKLLDSGLHTHPFCHPPKQQGQRALPPVPVIDPTVVTESSSG
SSNSTPGSSNSSSTSSSNNCSPNHQISLPNTPQHVVASGSASVRFRDKGA
KEKRHSLNALLGGGAPLSLLQTNRHSAEILSLPHELSRLEVSSSTALKPT
SAPQTSRVLKTTVQQQMQPNLPWGYLALFPYKPRQTDELELKKGCVYIVT
ERCVDGWFKGKNWLDITGVFPGNYLTPLRARDQQQLMHQWKYVPQNADAQ
MAQVQQHPVAPDVRLNNMLSMQPPDLPPRQQQATATTTSCSVWSKPVEAL
FSRKSEPKPETATASTTSSSSSGAVGLMRRLTHMKTRSKSPGASLQQVPK
EAISTNVEFTTNPSAKLHPVHVRSGSCPSQLQHSQPLNETPAAKTAAQQQ
QFLPKQLPSASTNSVSYGSQRVKGSKERPHLICARQSLDAATFRSMYNNA
ASPPPPTTSVAPAVYAGGQQQVIPGGGAQSQLHANMIIAPSHRKSHSLDA
SHVLSPSSNMITEAAIKASATTKSPYCTRESRFRCIVPYPPNSDIELELH
LGDIIYVQRKQKNGWYKGTHARTHKTGLFPASFVEPDC*

LD45365.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:16:59
Subject Length Description Subject Range Query Range Score Percent Strand
POSH-PA 838 CG4909-PA 1..838 1..838 4417 100 Plus
CAP-PN 313 CG18408-PN 61..181 140..254 196 37.1 Plus
CAP-PE 313 CG18408-PE 61..181 140..254 196 37.1 Plus
CAP-PG 500 CG18408-PG 248..368 140..254 196 37.1 Plus
CAP-PH 500 CG18408-PH 248..368 140..254 196 37.1 Plus