Clone LD45559 Report

Search the DGRC for LD45559

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:455
Well:59
Vector:pOT2
Associated Gene/TranscriptCht7-RA
Protein status:LD45559.pep: gold
Preliminary Size:3734
Sequenced Size:3946

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1869 2001-01-01 Release 2 assignment
CG1869 2001-07-04 Blastp of sequenced clone
CG1869 2003-01-01 Sim4 clustering to Release 3
CG1869 2008-04-29 Release 5.5 accounting
Cht7 2008-08-15 Release 5.9 accounting
Cht7 2008-12-18 5.12 accounting

Clone Sequence Records

LD45559.complete Sequence

3946 bp (3946 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051988

> LD45559.complete
CGAGTTCGAAGCGACAAGCGGTCCACTTCGCCTTTCTGGGGGCCAGGATT
TTTGAAAGTGACTAGTGACTAGTGGCAAAATATGTGCGGTTAGCCACGAC
AGTTTGCAGTGTCTCGAAAGCCACAACACACCTAAAAACGCAATCCAATC
GAATCCGAATCGAGTCCAGATCAATCCAATCTAATACCGACTGCCCGCTC
AAGGAGAATCGATTTTGTAGTTTGTGGATACGCGGCGCGGAGTCGAGCTT
TGAAAATGTTTCCACCGCGGTTGCTGCGAATCGCATTTGTGATATGCCTG
CTGATTGTCTTGCTCTCGCCCTCCGCAGACAGTGCACAGACCAAGACACG
TCGTCGACTGCGGCGTCCCACAACATCGGTCAGCTCCTCGAGGAGCAACC
TCATCGAGTCTAAGAAGTCCACTGAGGCTCCAGAGGCTGAGAAGCGTATT
GACCAGATCACCTCCGCCACCACCACAAGTGCTCGTCGTACACGCCTTCG
TTCCAAGGCGAAATTGGGAGCAGCTGCAGCTGGAGGAGCAGCCGTAGCAG
CTGGAGGAACTGCTCTCGTGGCCAGTGGATCTTCACTAAAGGGCAAGAAG
ACTAAGGTGGACGATGGAACGCCAAAGATTGTGTGCTACTACACCAACTG
GTCGCAGTACCGTGTCAAGATTGGCAAGTTCGTTCCGGAGGACATTCCAG
CCGATCTCTGCACCCACATTATCTTCGCTTTCGGATGGCTGAAGAAGAAC
AAGCTGAGTTCTTATGAGTCCAACGATGAGACCAAGGATAATGTCCCCGG
ACTGTACGAACGTATGATGACCCTCAAAAAGGCCAATCCTAAATTAAAGA
TTCTTCTAGCTCTTGGAGGCTGGTCCTTTGGCACCCAGAAATTCAAGGAC
ATGTCCTCCACGCGATACACCCGCCAGACCTTTGTCTACTCGGCCATTCC
TTTCCTGCGCAAGCGCGGCTTCGATGGTCTGGATATGGATTGGGAATACC
CCAAGGGTTCCGATGACAAGAAGAACTTCGTTCTGCTGCTGAAGGAACTG
CGCGAAGCCTTTGAAGCTGAGGCCCAGGAACTGAAGAAGCCCCGTCTCTT
GCTTTCCGCCGCCGTGCCAGTGGGTCCCGACAATATCCGTGGTGGATATG
ATGTGCCTGCCATCGCCAGTTATCTGGATTTTATCAATCTGATGGCCTAC
GATTTCCACGGAAAGTGGGAACGCGAGACTGGACACAATGCCCCACTTTA
TGCTCCCTCCACCGATTCGGAGTGGCGCAAACAACTGTCCGTTGACAATG
CCGCCAGTTTATGGGTTAAGATGGGCGCTCCCAAGGAGAAACTGGTCATT
GGAATGCCGACCTATGGACGCTCCTTCACTTTGGCTAATCCGGATAAGCA
TGGTCCCAATGCCCCCGCATCGGGGGGTGGACGCGAAGGTGTCTACACCA
AGGAAGGTGGTTTCTTGGCCTACTACGAGATCTGCGAAATGCTGCTGAAT
GGCGCTGTTTATGTGTGGGATGACGAAATGAAGGTTCCCTATCTTGTTGA
TGGAGACCAGTGGGTTGGCTTCGATGATGAGCGCGCCATTAGGAACAAGA
TGCACTGGATCAAGTCGAATGGCTTCGGTGGTGCCATGGTCTGGACCATC
GACATGGACGACTTTAAGGGAGAGGTGTGCGGTGGCAATGTCAAGTATCC
CCTGATTGGAGCTATGCGGGAGGAACTCCTGGGCATTTCCCGAGGAAAGG
AGGCCAAGGATGTTAACTGGACCGCCGTTGCGGCCACATTTGAGGATATC
GAAGAGAAACCAGAACCCATTAAGATATCTGTGGATGAGATTCTCAACAA
GGTGCGAAAGCCACAGGTACAGAAGAAGCAGCGCATCAAGTCTGGAGCAA
ATGCTGTCGCCTCAAACACTCGTCCTGCCCAGGTGTTCTGTTATCTGACC
AGCTGGTCGGCCAAGCGACCTGGAGCCGGTAAATTCCAGCCGGAGAACAT
CGATCCCAAGCTGTGCACCCACATCGTGTATGCCTTCGCCACTCTTCAGG
ACTACAAGCTAACAGAGGCCACCGATGATGATCCCGAGAATTATGAGAGT
GTAATTGCCTTGCGTGACAATAATCCCGATCTGCAGATCCTTTTGGCCAT
CGGAGGGTGGGCCTTTGGTTCCACTCCCTTCAAAGAGCTCACCTCGAATG
TGTTCCGTATGAATCAGTTCGTTTACGAGGCCATCGACTTTCTGCGCGAC
TATAAGTTCAACGGCTTGGATGTGGATTGGGAGTATCCTCGTGGTGCTGA
AGATCGTGTGGCCTACGTCAGTCTGCTAAAGGAATTGCGAGTGGCTTTTG
AGGGTGAGGCCAAGTCCTCTGGACTGCCACGCCTACTGCTCACTGCCGCT
GTACCCGCCTCCTTCGAGGCCATCGCCGCTGGCTACGATGTTCCAGAGAT
CTCGAAGTACCTGGACTTCATTAACGTGATGACCTATGACTTCCACGGAC
AGTGGGAACGCACAGTGGGACACAATTCGCCTCTGTTTGCATTGGAATCG
GCTACCGGTTACCAGAAGAAACTGACCGTTGATTACAGCGCGAGGGAGTG
GGTGAAACAGGGTGCTCCCAAGGAAAAGCTGCTTATCGGCATGCCCACCT
ATGGACGCAGTTTCGAGCTTGTCAATGACACTCAATTCGATATTGGATCC
CCCTCGTCCGGCGGTGGCAAGGCGGGCAAGTTCACCAACGAGGCCGGGTT
CCTCAGCTACTACGAGGTCTGCTCCTTCCTGGCGGCAGACAACACCACCC
TAGTTTGGGACTCGGAGCAGCAGGTGCCCTTCGCTTACCGCGGCAACCAG
TGGGTGGGCTTCGATGATGAGCGTTCTCTCAAGACCAAGACGGAATGGCT
GAAGGAGCAGGGCTTTGGAGGCATCATGGTGTGGTCCATCGACATGGATG
ACTTCTCCGGTCGCTGCGGCAGTGGTAAGTACCCACTTCTGACTGCCTTG
AACGACGAGCTGAAGGACTACAAGGTGGAGTTGGAATACGATGGTCCTTA
TGAATCCCATGGCCCACGAGGAGCATACACCACCAAAGATCCTCATGATG
TGACCTGCGCCGAAGAGGACGGACACATCAGCTACCATAAGGATTGGGCC
GACTGCACCCACTACTACATGTGCGAGGGCGAGCGGAAACACCACATGCC
CTGTCCCGCCAACCTGGTCTTCAATCCGCAGGAGAACGTCTGCGACTGGC
CCGAGAACGTCGAGGGATGCCACACGCCCACGGAGGCGCCAGCCTAAGAC
CTCCATCTTCGGATGGACTTGTTAATATTATGGAATCGATGCCCTAGATT
TAGTTGTAATGCGAAACTGCCACGAAACTCTTTTGCTGCCGCCGTCCCCA
TTCCGCAACTAACTACGAAAAATACTCGACAACTTGCTAAATTTCGGCTG
AATTTTTTTACACTAAATATAGGTCTAGCTAGTGCTGTAAGTAGTTTTTA
TGTCTTAGTTACCAATTCGCACCCACAACAAAGATGAGAATGATGAACCC
AAAAATCCTGAACAACTACTTTCTGAGAGGCGCACAATTAACTTTCGCAT
TTCCGTATGACTCGTAACAAAAAAGTTTATATGGAAGATGCCCGAAACTT
CCGTATAGCAAACTGTGATAATCATAAGAGACCAACCAACAAGAAATCGG
CCTAAGAAGTCACTATCAATCGAAATTTGAACGAATTTGAAAAACAAGCG
AAACAGTTTTACTCTTCAAAACAGATGCTTTTGCCTCAGCTCCCCTCCCA
TGTCATTCCCAATCTGAATAATACAAACAGGCACAGGAGAAAATTGTACA
CTTTCAACTTTAACAATAATTTTGTATTATAGAGTTGTAATTACGTAGTT
AAAATAAAAACAAACGTTAAAAACATAAAAAAAAAAAAAAAAAAAA

LD45559.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:28:20
Subject Length Description Subject Range Query Range Score Percent Strand
Cht7-RA 4006 Cht7-RA 74..4000 1..3927 19635 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:36:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3091544..3092514 2889..1919 4705 99 Minus
chr3L 24539361 chr3L 3092751..3093709 1806..848 4690 99.3 Minus
chr3L 24539361 chr3L 3090378..3091211 3926..3092 4035 99.2 Minus
chr3L 24539361 chr3L 3093770..3094278 849..341 2545 100 Minus
chr3L 24539361 chr3L 3106077..3106334 258..1 1260 99.2 Minus
chr3L 24539361 chr3L 3091272..3091475 3091..2888 1020 100 Minus
chr3L 24539361 chr3L 3092579..3092692 1918..1805 555 99.1 Minus
chr3L 24539361 chr3L 3097059..3097141 340..258 415 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:41:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:35:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3092152..3093122 2889..1919 4855 100 Minus
3L 28110227 3L 3093359..3094317 1806..848 4795 100 Minus
3L 28110227 3L 3090984..3091819 3927..3092 4180 100 Minus
3L 28110227 3L 3094378..3094886 849..341 2545 100 Minus
3L 28110227 3L 3106674..3106931 258..1 1290 100 Minus
3L 28110227 3L 3091880..3092083 3091..2888 1020 100 Minus
3L 28110227 3L 3093187..3093300 1918..1805 570 100 Minus
3L 28110227 3L 3097663..3097745 340..258 415 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3092152..3093122 2889..1919 4855 100 Minus
3L 28103327 3L 3093359..3094317 1806..848 4795 100 Minus
3L 28103327 3L 3090984..3091819 3927..3092 4180 100 Minus
3L 28103327 3L 3094378..3094886 849..341 2545 100 Minus
3L 28103327 3L 3106674..3106931 258..1 1290 100 Minus
3L 28103327 3L 3091880..3092083 3091..2888 1020 100 Minus
3L 28103327 3L 3093187..3093300 1918..1805 570 100 Minus
3L 28103327 3L 3097663..3097745 340..258 415 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:35:59 has no hits.

LD45559.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:36:59 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3090378..3091211 3092..3926 99 <- Minus
chr3L 3091272..3091473 2890..3091 100 <- Minus
chr3L 3091544..3092514 1919..2889 98 <- Minus
chr3L 3092579..3092690 1807..1918 99 <- Minus
chr3L 3092751..3093707 850..1806 99 <- Minus
chr3L 3093770..3094278 341..849 100 <- Minus
chr3L 3097059..3097140 259..340 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:00:50 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 1..3042 256..3297 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:15:32 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 1..3042 256..3297 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:08:50 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 1..3042 256..3297 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:46:57 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 1..3042 256..3297 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:29 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 1..3042 256..3297 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:00:47 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 26..3951 1..3926 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:15:32 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 26..3951 1..3926 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:08:50 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 28..3953 1..3926 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:46:57 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 26..3951 1..3926 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:29 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
Cht7-RA 28..3953 1..3926 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:36:59 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3090985..3091819 3092..3926 100 <- Minus
3L 3091880..3092081 2890..3091 100 <- Minus
3L 3092152..3093122 1919..2889 100 <- Minus
3L 3093187..3093298 1807..1918 100 <- Minus
3L 3093359..3094315 850..1806 100 <- Minus
3L 3094378..3094886 341..849 100 <- Minus
3L 3097663..3097744 259..340 100 <- Minus
3L 3106674..3106931 1..258 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:36:59 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3090985..3091819 3092..3926 100 <- Minus
3L 3091880..3092081 2890..3091 100 <- Minus
3L 3092152..3093122 1919..2889 100 <- Minus
3L 3093187..3093298 1807..1918 100 <- Minus
3L 3093359..3094315 850..1806 100 <- Minus
3L 3094378..3094886 341..849 100 <- Minus
3L 3097663..3097744 259..340 100 <- Minus
3L 3106674..3106931 1..258 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:36:59 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3090985..3091819 3092..3926 100 <- Minus
3L 3091880..3092081 2890..3091 100 <- Minus
3L 3092152..3093122 1919..2889 100 <- Minus
3L 3093187..3093298 1807..1918 100 <- Minus
3L 3093359..3094315 850..1806 100 <- Minus
3L 3094378..3094886 341..849 100 <- Minus
3L 3097663..3097744 259..340 100 <- Minus
3L 3106674..3106931 1..258 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:08:50 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3090985..3091819 3092..3926 100 <- Minus
arm_3L 3091880..3092081 2890..3091 100 <- Minus
arm_3L 3092152..3093122 1919..2889 100 <- Minus
arm_3L 3093187..3093298 1807..1918 100 <- Minus
arm_3L 3093359..3094315 850..1806 100 <- Minus
arm_3L 3094378..3094886 341..849 100 <- Minus
arm_3L 3097663..3097744 259..340 100 <- Minus
arm_3L 3106674..3106931 1..258 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:24:51 Download gff for LD45559.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3106674..3106931 1..258 100   Minus
3L 3090985..3091819 3092..3926 100 <- Minus
3L 3091880..3092081 2890..3091 100 <- Minus
3L 3092152..3093122 1919..2889 100 <- Minus
3L 3093187..3093298 1807..1918 100 <- Minus
3L 3093359..3094315 850..1806 100 <- Minus
3L 3094378..3094886 341..849 100 <- Minus
3L 3097663..3097744 259..340 100 <- Minus

LD45559.pep Sequence

Translation from 255 to 3296

> LD45559.pep
MFPPRLLRIAFVICLLIVLLSPSADSAQTKTRRRLRRPTTSVSSSRSNLI
ESKKSTEAPEAEKRIDQITSATTTSARRTRLRSKAKLGAAAAGGAAVAAG
GTALVASGSSLKGKKTKVDDGTPKIVCYYTNWSQYRVKIGKFVPEDIPAD
LCTHIIFAFGWLKKNKLSSYESNDETKDNVPGLYERMMTLKKANPKLKIL
LALGGWSFGTQKFKDMSSTRYTRQTFVYSAIPFLRKRGFDGLDMDWEYPK
GSDDKKNFVLLLKELREAFEAEAQELKKPRLLLSAAVPVGPDNIRGGYDV
PAIASYLDFINLMAYDFHGKWERETGHNAPLYAPSTDSEWRKQLSVDNAA
SLWVKMGAPKEKLVIGMPTYGRSFTLANPDKHGPNAPASGGGREGVYTKE
GGFLAYYEICEMLLNGAVYVWDDEMKVPYLVDGDQWVGFDDERAIRNKMH
WIKSNGFGGAMVWTIDMDDFKGEVCGGNVKYPLIGAMREELLGISRGKEA
KDVNWTAVAATFEDIEEKPEPIKISVDEILNKVRKPQVQKKQRIKSGANA
VASNTRPAQVFCYLTSWSAKRPGAGKFQPENIDPKLCTHIVYAFATLQDY
KLTEATDDDPENYESVIALRDNNPDLQILLAIGGWAFGSTPFKELTSNVF
RMNQFVYEAIDFLRDYKFNGLDVDWEYPRGAEDRVAYVSLLKELRVAFEG
EAKSSGLPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW
ERTVGHNSPLFALESATGYQKKLTVDYSAREWVKQGAPKEKLLIGMPTYG
RSFELVNDTQFDIGSPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTLV
WDSEQQVPFAYRGNQWVGFDDERSLKTKTEWLKEQGFGGIMVWSIDMDDF
SGRCGSGKYPLLTALNDELKDYKVELEYDGPYESHGPRGAYTTKDPHDVT
CAEEDGHISYHKDWADCTHYYMCEGERKHHMPCPANLVFNPQENVCDWPE
NVEGCHTPTEAPA*

LD45559.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10225-PA 1030 GF10225-PA 26..1030 2..1013 5086 95.2 Plus
Dana\GF22750-PA 2318 GF22750-PA 964..1886 120..1001 1448 36.4 Plus
Dana\GF19149-PA 1427 GF19149-PA 20..393 559..919 869 44.4 Plus
Dana\GF11929-PA 477 GF11929-PA 18..475 548..1002 852 37 Plus
Dana\GF19149-PA 1427 GF19149-PA 20..452 124..540 814 39.4 Plus
Dana\GF22750-PA 2318 GF22750-PA 1901..2308 529..921 776 39 Plus
Dana\GF22750-PA 2318 GF22750-PA 1932..2317 115..503 752 41.7 Plus
Dana\GF11929-PA 477 GF11929-PA 9..402 104..493 738 39.2 Plus
Dana\GF18616-PA 588 GF18616-PA 24..386 120..476 722 39.5 Plus
Dana\GF18616-PA 588 GF18616-PA 13..404 544..924 695 35.1 Plus
Dana\GF22750-PA 2318 GF22750-PA 130..579 41..491 630 32.9 Plus
Dana\GF22750-PA 2318 GF22750-PA 214..621 560..957 620 33 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14483-PA 1013 GG14483-PA 1..1013 1..1013 5428 99.4 Plus
Dere\GG21384-PA 2102 GG21384-PA 775..1691 124..1003 1458 35.5 Plus
Dere\GG18337-PA 4550 GG18337-PA 53..426 559..919 872 44.4 Plus
Dere\GG22081-PA 476 GG22081-PA 15..475 544..1003 830 36.7 Plus
Dere\GG18337-PA 4550 GG18337-PA 53..439 124..501 825 41.6 Plus
Dere\GG21384-PA 2102 GG21384-PA 1725..2101 124..503 758 42.2 Plus
Dere\GG22081-PA 476 GG22081-PA 13..402 101..493 727 39.3 Plus
Dere\GG20808-PA 463 GG20808-PA 28..460 562..1003 718 35.8 Plus
Dere\GG21384-PA 2102 GG21384-PA 1694..2090 533..919 716 38.7 Plus
Dere\GG20808-PA 463 GG20808-PA 28..371 127..491 681 38.9 Plus
Dere\GG21384-PA 2102 GG21384-PA 48..393 122..491 536 35.4 Plus
Dere\GG21384-PA 2102 GG21384-PA 49..393 558..919 524 33 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15677-PA 1583 GH15677-PA 639..1582 1..954 4527 91.4 Plus
Dgri\GH11814-PA 922 GH11814-PA 43..419 558..921 858 43.8 Plus
Dgri\GH11814-PA 922 GH11814-PA 44..418 124..492 808 41.8 Plus
Dgri\GH12757-PA 458 GH12757-PA 4..458 549..1005 807 37.7 Plus
Dgri\GH20529-PA 458 GH20529-PA 4..458 549..1005 805 37.7 Plus
Dgri\GH20466-PA 474 GH20466-PA 27..470 560..1002 715 34.6 Plus
Dgri\GH12757-PA 458 GH12757-PA 16..386 125..492 709 39.2 Plus
Dgri\GH20529-PA 458 GH20529-PA 16..386 125..492 708 39.2 Plus
Dgri\GH20466-PA 474 GH20466-PA 27..369 125..488 657 38.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:42:59
Subject Length Description Subject Range Query Range Score Percent Strand
Cht7-PA 1013 CG1869-PA 1..1013 1..1013 5404 100 Plus
Cht10-PA 2286 CG18140-PA 959..1888 117..1013 1461 35.8 Plus
Cht10-PC 2286 CG18140-PC 959..1888 117..1013 1461 35.8 Plus
Cht10-PB 2286 CG18140-PB 959..1888 117..1013 1461 35.8 Plus
Cht6-PF 1367 CG43374-PF 31..404 559..919 852 44.4 Plus
Cht6-PG 1580 CG43374-PG 31..404 559..919 852 44.4 Plus
Cht6-PH 2225 CG43374-PH 31..404 559..919 852 44.4 Plus
Cht6-PI 2574 CG43374-PI 31..404 559..919 852 44.4 Plus
Cht6-PK 3703 CG43374-PK 31..404 559..919 852 44.4 Plus
Cht6-PJ 4519 CG43374-PJ 31..404 559..919 852 44.4 Plus
Cht6-PC 4611 CG43374-PC 31..404 559..919 852 44.4 Plus
Cht8-PA 476 CG9357-PA 15..475 544..1003 829 37.1 Plus
Cht6-PF 1367 CG43374-PF 31..417 124..501 796 41.8 Plus
Cht6-PG 1580 CG43374-PG 31..417 124..501 796 41.8 Plus
Cht6-PH 2225 CG43374-PH 31..417 124..501 796 41.8 Plus
Cht6-PI 2574 CG43374-PI 31..417 124..501 796 41.8 Plus
Cht6-PK 3703 CG43374-PK 31..417 124..501 796 41.8 Plus
Cht6-PJ 4519 CG43374-PJ 31..417 124..501 796 41.8 Plus
Cht6-PC 4611 CG43374-PC 31..417 124..501 796 41.8 Plus
Cht8-PA 476 CG9357-PA 13..402 101..493 741 39.8 Plus
Cht5-PA 595 CG9307-PA 20..386 116..476 739 40.4 Plus
Cht10-PA 2286 CG18140-PA 1909..2284 124..502 722 41.3 Plus
Cht10-PC 2286 CG18140-PC 1909..2284 124..502 722 41.3 Plus
Cht10-PB 2286 CG18140-PB 1909..2284 124..502 722 41.3 Plus
Cht4-PA 462 CG3986-PA 28..462 562..999 709 36 Plus
Cht10-PA 2286 CG18140-PA 1909..2274 559..919 696 40.5 Plus
Cht10-PC 2286 CG18140-PC 1909..2274 559..919 696 40.5 Plus
Cht10-PB 2286 CG18140-PB 1909..2274 559..919 696 40.5 Plus
Cht9-PA 368 CG10531-PA 18..366 121..491 674 39.4 Plus
Cht4-PA 462 CG3986-PA 28..371 127..491 670 39.2 Plus
Cht5-PA 595 CG9307-PA 19..404 550..924 669 33.4 Plus
Cht9-PA 368 CG10531-PA 23..367 560..920 649 37.1 Plus
Cht2-PB 484 CG2054-PB 43..393 125..472 623 39.5 Plus
Cht2-PC 484 CG2054-PC 43..393 125..472 623 39.5 Plus
Cht2-PA 484 CG2054-PA 43..393 125..472 623 39.5 Plus
Cht10-PA 2286 CG18140-PA 218..586 122..491 619 37.7 Plus
Cht10-PC 2286 CG18140-PC 218..586 122..491 619 37.7 Plus
Cht10-PB 2286 CG18140-PB 218..586 122..491 619 37.7 Plus
Cht2-PB 484 CG2054-PB 30..427 550..917 617 36.9 Plus
Cht2-PC 484 CG2054-PC 30..427 550..917 617 36.9 Plus
Cht2-PA 484 CG2054-PA 30..427 550..917 617 36.9 Plus
Cht10-PA 2286 CG18140-PA 220..620 559..956 602 34.4 Plus
Cht10-PC 2286 CG18140-PC 220..620 559..956 602 34.4 Plus
Cht10-PB 2286 CG18140-PB 220..620 559..956 602 34.4 Plus
Cht12-PA 470 CG30293-PA 25..435 560..996 453 27.6 Plus
Cht12-PA 470 CG30293-PA 25..362 125..476 438 31.7 Plus
Cht11-PA 432 CG3044-PA 68..428 124..491 429 31.9 Plus
Cht11-PA 432 CG3044-PA 68..430 559..921 425 29.6 Plus
Idgf2-PA 440 CG4475-PA 19..440 120..491 359 26.8 Plus
Idgf2-PA 440 CG4475-PA 16..440 552..919 349 25.8 Plus
Idgf4-PC 442 CG1780-PC 23..442 121..491 333 26.9 Plus
Idgf4-PB 442 CG1780-PB 23..442 121..491 333 26.9 Plus
Idgf4-PA 442 CG1780-PA 23..442 121..491 333 26.9 Plus
Idgf6-PB 452 CG5210-PB 19..450 531..919 321 24.5 Plus
Idgf6-PA 452 CG5210-PA 19..450 531..919 321 24.5 Plus
Idgf4-PC 442 CG1780-PC 27..442 560..919 318 25.5 Plus
Idgf4-PB 442 CG1780-PB 27..442 560..919 318 25.5 Plus
Idgf4-PA 442 CG1780-PA 27..442 560..919 318 25.5 Plus
Idgf6-PB 452 CG5210-PB 31..450 125..491 317 25.4 Plus
Idgf6-PA 452 CG5210-PA 31..450 125..491 317 25.4 Plus
Idgf3-PD 441 CG4559-PD 29..440 562..919 316 25.8 Plus
Idgf3-PA 441 CG4559-PA 29..440 562..919 316 25.8 Plus
Idgf3-PB 441 CG4559-PB 29..440 562..919 316 25.8 Plus
Idgf3-PC 441 CG4559-PC 29..440 562..919 316 25.8 Plus
Idgf2-PB 368 CG4475-PB 2..368 174..491 289 26.5 Plus
Idgf2-PC 368 CG4475-PC 2..368 174..491 289 26.5 Plus
Idgf2-PB 368 CG4475-PB 1..368 602..919 284 24.7 Plus
Idgf2-PC 368 CG4475-PC 1..368 602..919 284 24.7 Plus
Idgf1-PA 439 CG4472-PA 15..435 116..488 281 25.3 Plus
Idgf5-PA 444 CG5154-PA 30..444 559..919 274 23.3 Plus
Idgf1-PA 439 CG4472-PA 10..434 547..915 272 26.4 Plus
Idgf5-PA 444 CG5154-PA 30..444 124..491 235 23.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12722-PA 1630 GI12722-PA 620..1630 1..1013 5076 93.2 Plus
Dmoj\GI16000-PA 3388 GI16000-PA 31..403 559..921 848 43.9 Plus
Dmoj\GI18975-PA 464 GI18975-PA 5..463 550..1003 802 37.7 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 1551..2026 551..1003 793 35.5 Plus
Dmoj\GI16000-PA 3388 GI16000-PA 25..402 118..492 790 40.7 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 2089..2465 124..503 761 42.8 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 2089..2455 559..920 752 41.7 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 1552..1925 118..493 729 41.2 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 1044..1470 120..551 725 37.9 Plus
Dmoj\GI23163-PA 731 GI23163-PA 174..532 124..476 719 39.3 Plus
Dmoj\GI18975-PA 464 GI18975-PA 13..385 122..493 698 39 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 1048..1415 559..921 697 38.4 Plus
Dmoj\GI23163-PA 731 GI23163-PA 166..550 551..924 666 33.9 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 208..607 94..491 607 34.8 Plus
Dmoj\GI11661-PA 2466 GI11661-PA 237..613 554..925 596 35.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20757-PA 1028 GL20757-PA 51..998 2..948 4704 94.9 Plus
Dper\GL20518-PA 826 GL20518-PA 121..785 327..922 1010 35.3 Plus
Dper\GL10147-PA 478 GL10147-PA 20..477 548..1003 839 37.7 Plus
Dper\GL10147-PA 478 GL10147-PA 14..400 101..493 751 40.5 Plus
Dper\GL20518-PA 826 GL20518-PA 415..784 121..493 736 41.6 Plus
Dper\GL23091-PA 581 GL23091-PA 22..384 120..476 729 39.7 Plus
Dper\GL23091-PA 581 GL23091-PA 17..402 550..924 690 34.6 Plus
Dper\GL10180-PA 368 GL10180-PA 18..366 121..491 667 38.6 Plus
Dper\GL10180-PA 368 GL10180-PA 23..367 560..920 622 35.7 Plus
Dper\GL20518-PA 826 GL20518-PA 107..289 734..916 335 37.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:13:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15052-PA 1037 GA15052-PA 52..996 2..945 4690 95.1 Plus
Dpse\GA22363-PA 2657 GA22363-PA 31..406 559..921 872 44.4 Plus
Dpse\GA25090-PA 478 GA25090-PA 20..477 548..1003 840 37.6 Plus
Dpse\GA22363-PA 2657 GA22363-PA 31..405 124..492 819 41.8 Plus
Dpse\GA25359-PA 2487 GA25359-PA 1610..2086 559..1013 803 37.1 Plus
Dpse\GA25359-PA 2487 GA25359-PA 2110..2476 559..920 765 41.7 Plus
Dpse\GA25359-PA 2487 GA25359-PA 2110..2486 124..503 755 42.3 Plus
Dpse\GA25090-PA 478 GA25090-PA 14..400 101..493 751 40.5 Plus
Dpse\GA25359-PA 2487 GA25359-PA 1607..1976 121..493 738 41.9 Plus
Dpse\GA21687-PB 583 GA21687-PB 24..386 120..476 727 39.5 Plus
Dpse\GA25359-PA 2487 GA25359-PA 1103..1480 120..499 719 40.4 Plus
Dpse\GA25359-PA 2487 GA25359-PA 1107..1474 559..921 700 38.4 Plus
Dpse\GA21687-PB 583 GA21687-PB 19..404 550..924 688 34.4 Plus
Dpse\GA25359-PA 2487 GA25359-PA 287..663 114..491 624 36 Plus
Dpse\GA25359-PA 2487 GA25359-PA 297..669 559..925 604 34.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:13:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14087-PA 992 GM14087-PA 1..992 1..1013 5302 97.6 Plus
Dsec\GM15800-PA 435 GM15800-PA 50..434 612..1003 726 38.2 Plus
Dsec\GM24130-PA 592 GM24130-PA 20..386 116..476 725 39.8 Plus
Dsec\GM15755-PA 427 GM15755-PA 10..427 575..999 677 35.7 Plus
Dsec\GM11400-PA 338 GM11400-PA 42..337 548..838 668 43.4 Plus
Dsec\GM24130-PA 592 GM24130-PA 18..404 548..924 664 34.7 Plus
Dsec\GM15755-PA 427 GM15755-PA 10..340 140..491 644 39.2 Plus
Dsec\GM15800-PA 435 GM15800-PA 56..361 189..493 638 41.9 Plus
Dsec\GM11400-PA 338 GM11400-PA 53..337 124..409 625 41.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:13:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13359-PA 1013 GD13359-PA 1..1013 1..1013 5450 99.9 Plus
Dsim\GD25229-PA 458 GD25229-PA 28..458 562..999 693 35.8 Plus
Dsim\GD17715-PA 878 GD17715-PA 3..462 578..1013 682 33.9 Plus
Dsim\GD25229-PA 458 GD25229-PA 28..371 127..491 674 39.5 Plus
Dsim\GD25228-PA 368 GD25228-PA 18..366 121..491 670 39.4 Plus
Dsim\GD18929-PA 565 GD18929-PA 20..359 116..476 660 37.8 Plus
Dsim\GD25228-PA 368 GD25228-PA 23..367 560..920 646 36.9 Plus
Dsim\GD17715-PA 878 GD17715-PA 11..351 151..494 615 39.9 Plus
Dsim\GD18929-PA 565 GD18929-PA 18..377 548..924 600 32.7 Plus
Dsim\GD17715-PA 878 GD17715-PA 484..762 124..404 509 39.7 Plus
Dsim\GD17715-PA 878 GD17715-PA 484..762 559..833 489 38.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:14:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12709-PA 1609 GJ12709-PA 633..1577 1..945 4609 93.7 Plus
Dvir\GJ18726-PA 3322 GJ18726-PA 64..438 558..919 854 44.3 Plus
Dvir\GJ22437-PA 469 GJ22437-PA 26..468 559..1003 828 38.6 Plus
Dvir\GJ18726-PA 3322 GJ18726-PA 65..459 124..515 792 40.9 Plus
Dvir\GJ14479-PA 584 GJ14479-PA 24..459 120..558 732 35.5 Plus
Dvir\GJ22437-PA 469 GJ22437-PA 17..396 115..494 716 38.6 Plus
Dvir\GJ21926-PA 464 GJ21926-PA 26..460 562..1002 708 34.8 Plus
Dvir\GJ21926-PA 464 GJ21926-PA 24..369 125..491 691 39.8 Plus
Dvir\GJ14479-PA 584 GJ14479-PA 20..404 551..924 675 34.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:14:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12312-PA 1046 GK12312-PA 86..1031 2..945 4662 92.8 Plus
Dwil\GK25829-PA 4336 GK25829-PA 21..396 549..914 882 45.1 Plus
Dwil\GK23269-PA 470 GK23269-PA 24..468 556..1002 818 38.1 Plus
Dwil\GK25829-PA 4336 GK25829-PA 28..402 124..492 817 41.3 Plus
Dwil\GK14769-PA 2431 GK14769-PA 1528..1992 559..1003 805 37.6 Plus
Dwil\GK14769-PA 2431 GK14769-PA 2054..2430 124..503 761 42.8 Plus
Dwil\GK14769-PA 2431 GK14769-PA 2054..2420 559..920 756 41.7 Plus
Dwil\GK23269-PA 470 GK23269-PA 8..417 96..513 744 39.4 Plus
Dwil\GK14769-PA 2431 GK14769-PA 1528..1894 124..493 735 42.2 Plus
Dwil\GK14197-PA 588 GK14197-PA 26..389 119..476 726 39.4 Plus
Dwil\GK14769-PA 2431 GK14769-PA 1029..1408 120..501 722 40.7 Plus
Dwil\GK14197-PA 588 GK14197-PA 18..407 546..924 699 35 Plus
Dwil\GK14769-PA 2431 GK14769-PA 1033..1400 559..921 688 38.2 Plus
Dwil\GK14769-PA 2431 GK14769-PA 234..641 559..963 615 33.7 Plus
Dwil\GK14769-PA 2431 GK14769-PA 219..600 109..491 609 34.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:14:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26461-PA 1013 GE21672-PA 1..1013 1..1013 5427 99.4 Plus
Dyak\GE26461-PB 975 GE26461-PB 1..953 2..954 5006 98.5 Plus
Dyak\GE17254-PA 2311 GE17254-PA 981..1899 120..1003 1452 35.7 Plus
Dyak\GE12162-PA 476 GE12162-PA 15..475 544..1003 853 38.1 Plus
Dyak\GE12162-PA 476 GE12162-PA 3..402 91..493 739 39.5 Plus
Dyak\GE26297-PA 595 GE26297-PA 20..386 116..476 730 40.4 Plus
Dyak\GE17254-PA 2311 GE17254-PA 1933..2310 124..503 722 41 Plus
Dyak\GE17254-PA 2311 GE17254-PA 1907..2299 532..919 700 37.3 Plus
Dyak\GE26297-PA 595 GE26297-PA 19..404 550..924 681 34.4 Plus
Dyak\GE17254-PA 2311 GE17254-PA 233..601 122..491 636 37 Plus
Dyak\GE17254-PA 2311 GE17254-PA 234..601 558..919 634 37.5 Plus

LD45559.hyp Sequence

Translation from 255 to 3296

> LD45559.hyp
MFPPRLLRIAFVICLLIVLLSPSADSAQTKTRRRLRRPTTSVSSSRSNLI
ESKKSTEAPEAEKRIDQITSATTTSARRTRLRSKAKLGAAAAGGAAVAAG
GTALVASGSSLKGKKTKVDDGTPKIVCYYTNWSQYRVKIGKFVPEDIPAD
LCTHIIFAFGWLKKNKLSSYESNDETKDNVPGLYERMMTLKKANPKLKIL
LALGGWSFGTQKFKDMSSTRYTRQTFVYSAIPFLRKRGFDGLDMDWEYPK
GSDDKKNFVLLLKELREAFEAEAQELKKPRLLLSAAVPVGPDNIRGGYDV
PAIASYLDFINLMAYDFHGKWERETGHNAPLYAPSTDSEWRKQLSVDNAA
SLWVKMGAPKEKLVIGMPTYGRSFTLANPDKHGPNAPASGGGREGVYTKE
GGFLAYYEICEMLLNGAVYVWDDEMKVPYLVDGDQWVGFDDERAIRNKMH
WIKSNGFGGAMVWTIDMDDFKGEVCGGNVKYPLIGAMREELLGISRGKEA
KDVNWTAVAATFEDIEEKPEPIKISVDEILNKVRKPQVQKKQRIKSGANA
VASNTRPAQVFCYLTSWSAKRPGAGKFQPENIDPKLCTHIVYAFATLQDY
KLTEATDDDPENYESVIALRDNNPDLQILLAIGGWAFGSTPFKELTSNVF
RMNQFVYEAIDFLRDYKFNGLDVDWEYPRGAEDRVAYVSLLKELRVAFEG
EAKSSGLPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW
ERTVGHNSPLFALESATGYQKKLTVDYSAREWVKQGAPKEKLLIGMPTYG
RSFELVNDTQFDIGSPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTLV
WDSEQQVPFAYRGNQWVGFDDERSLKTKTEWLKEQGFGGIMVWSIDMDDF
SGRCGSGKYPLLTALNDELKDYKVELEYDGPYESHGPRGAYTTKDPHDVT
CAEEDGHISYHKDWADCTHYYMCEGERKHHMPCPANLVFNPQENVCDWPE
NVEGCHTPTEAPA*

LD45559.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
Cht7-PA 1013 CG1869-PA 1..1013 1..1013 5404 100 Plus
Cht6-PF 1367 CG43374-PF 31..404 559..919 852 44.4 Plus
Cht6-PG 1580 CG43374-PG 31..404 559..919 852 44.4 Plus
Cht6-PH 2225 CG43374-PH 31..404 559..919 852 44.4 Plus
Cht8-PA 476 CG9357-PA 15..475 544..1003 829 37.1 Plus
Cht6-PF 1367 CG43374-PF 31..417 124..501 796 41.8 Plus
Cht6-PG 1580 CG43374-PG 31..417 124..501 796 41.8 Plus
Cht8-PA 476 CG9357-PA 13..402 101..493 741 39.8 Plus