BDGP Sequence Production Resources |
Search the DGRC for LD45607
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 456 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4619-RA |
Protein status: | LD45607.pep: gold |
Preliminary Size: | 2091 |
Sequenced Size: | 1915 |
Gene | Date | Evidence |
---|---|---|
CG4619 | 2001-01-01 | Release 2 assignment |
CG4619 | 2001-10-10 | Blastp of sequenced clone |
CG4619 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4619 | 2008-04-29 | Release 5.5 accounting |
CG4619 | 2008-08-15 | Release 5.9 accounting |
CG4619 | 2008-12-18 | 5.12 accounting |
1915 bp (1915 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061494
> LD45607.complete ATTTAACGTATGCTTGCGGACTTGCACGTTGTTTTGTAAATTCATTACAT AAATTGAGAAGAAGTGCATCCGATATGTACGCCCTGCTTCGCCGCTTTGC CGGCGTCACCAACTTGGGATGTCCCATCAGAACCTACGCCTCCCTTACGC CCAGAGATGTATTGCGGAGCAGCGATGAGACCGGCACACTGCTGACCCGC TTCGCCAAGCACATTGCACTGGAGCGCTACAGGGATTCGGATCACGTGTT GCCCAAGACGACGGTCCGGTACTCTGACTTCTTTCCCATCACGGACGACC GGTACTTTCAGCGGACGGTAGAGAAAACGGATGCAGCCCAATTGCCCGCC CTGATCATCCAGGCATCCAGCTATCGCTCCAATGCCGCTGTACCCATGTA TGTGACTGCGCTTAACACGTTGGATAACCATGCGGCTAAACAGCTGGACA AGATGGATACCGCCACAGTGCTCGAGACGCTCTACTCCTTTCTATTCCTC ATACCAAGTTGGATAAAGCGATTGGATTTTTACCAAGCAGCCATGCAACG ACTGGTCAGGGAGGATTTTCGCGGCAACAAGGAGCGATTCGTTCAGGTGT GCTTCTATATGGGATTGCAAAAGAAGCAGGCCAAATCTTCTGAGGAATTC CAGCAACTCCTGGAAGAGCATCTACAAACGCATTTGCCTGAACTAAATGA AATGGACCTTGCCGTGGTCAGCAATGCGGCGTACAAAACCTCAACTTTGG TAACCGGTGAGGCGAAAACGGCATACGAAGCAAGACTCGTTAATGCCATA TTAAATCTGGAGATAAACACCGGAAGCGATGCCTTGCTGGTCTCCTTTGT CAAGGCATTGCGTCTGCAGCAAGTCAAAGATGAACGAGTGTGCCAGCACC TGCAAGATATCTGTCTGGATCCTGTAAAGATAACCCATATTGAACCCCGA GGACTTGCCCATATCTTTGCATTCTTTGCCGAGCAGCTTTGGGATCAGAA TGAATGCCTAACTGTCGTCGTAAAACGACTCATGACTCTTCTCAAGCCTG GAGACCTGCGCTCCAAAGACTTGGCCACATTCCTGTGGGCCAGCGCTCAA CTCAATTGTGCATTGACTCCTGAGGAAATCAGACAATTGGAACTGACCGC CCTGCGCAAGCTGGATCATGGGGAGTACGAATATTTCCCTGACAACCTTG TTGACACCTGCCTCTCTCTGTGCACTTTGGGTCACTACTCTAAGGATCTG ATTAATGCAGCTGAAGAACTAAAAGCTGCCCAAAAACGCCAGCGAGCCCA ACCCAAGGTGGATAGTCGTTTAATTGTGCTGCGATCTGCTGTGGCCATTG AGCAGCCTTCAATTGCTAAAGTTAAAACAGAACGAGCTTTTAAAGAGTTT GATGGAGCACCAGCTTATTTGCTAAAAGATCGCCCAGACTTGACGAAATA CGCCCAGGAGCTGAGTGGCGACGCGGATGTGGAGGGCGTGGATGTGGTGT GTCCCATTGTCGGAATAAATTTGCCAAGCTTACGAGTGCAGACAATGGGT GCCCAGGAGAGTGTGTACTTTGTTGAACTGCTAACCGCAGAACAGACTCT GAAATTCAGCAAGAAACCGACTTCATTAATACGTCTTAAGAAAAGACTTT TGGAATCCCTTGGCCGAAAAGTTGTAGTACTAAACTCAACAGAAATGGCC ACCAATGCAAAGGAACTCCGCCAGCTCCTAGAACCGGCAGCAAATGCAGG AGAAGAATCCAAGGTTGCCCAAGGCGTGGGCAACTGAATTGTGTGATATA ATATGGGGCCATATCGGCCTTCTAGGCTAGTTACAAATCGTAGCTTTATT TAACAGTGTTTTATGTACTTGTACATATTATTTAAATATTAATAGCAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc1-2 | 1644 | Tc1-2 TC1-2 1644bp | 1419..1462 | 1891..1848 | 130 | 77.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9937802..9939480 | 1..1679 | 99 | -> | Plus |
chr2L | 9939541..9939757 | 1680..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 1..1713 | 75..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RB | 1..1713 | 75..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 1..1713 | 75..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 1..1713 | 75..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 1..1713 | 75..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 26..1921 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 26..1921 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 28..1923 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 26..1921 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4619-RA | 28..1923 | 1..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9938890..9940568 | 1..1679 | 100 | -> | Plus |
2L | 9940629..9940845 | 1680..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9938890..9940568 | 1..1679 | 100 | -> | Plus |
2L | 9940629..9940845 | 1680..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9938890..9940568 | 1..1679 | 100 | -> | Plus |
2L | 9940629..9940845 | 1680..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9938890..9940568 | 1..1679 | 100 | -> | Plus |
arm_2L | 9940629..9940845 | 1680..1896 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9938890..9940568 | 1..1679 | 100 | -> | Plus |
2L | 9940629..9940845 | 1680..1896 | 100 | Plus |
Translation from 2 to 1786
> LD45607.hyp LTYACGLARCFVNSLHKLRRSASDMYALLRRFAGVTNLGCPIRTYASLTP RDVLRSSDETGTLLTRFAKHIALERYRDSDHVLPKTTVRYSDFFPITDDR YFQRTVEKTDAAQLPALIIQASSYRSNAAVPMYVTALNTLDNHAAKQLDK MDTATVLETLYSFLFLIPSWIKRLDFYQAAMQRLVREDFRGNKERFVQVC FYMGLQKKQAKSSEEFQQLLEEHLQTHLPELNEMDLAVVSNAAYKTSTLV TGEAKTAYEARLVNAILNLEINTGSDALLVSFVKALRLQQVKDERVCQHL QDICLDPVKITHIEPRGLAHIFAFFAEQLWDQNECLTVVVKRLMTLLKPG DLRSKDLATFLWASAQLNCALTPEEIRQLELTALRKLDHGEYEYFPDNLV DTCLSLCTLGHYSKDLINAAEELKAAQKRQRAQPKVDSRLIVLRSAVAIE QPSIAKVKTERAFKEFDGAPAYLLKDRPDLTKYAQELSGDADVEGVDVVC PIVGINLPSLRVQTMGAQESVYFVELLTAEQTLKFSKKPTSLIRLKKRLL ESLGRKVVVLNSTEMATNAKELRQLLEPAANAGEESKVAQGVGN*
Translation from 74 to 1786
> LD45607.pep MYALLRRFAGVTNLGCPIRTYASLTPRDVLRSSDETGTLLTRFAKHIALE RYRDSDHVLPKTTVRYSDFFPITDDRYFQRTVEKTDAAQLPALIIQASSY RSNAAVPMYVTALNTLDNHAAKQLDKMDTATVLETLYSFLFLIPSWIKRL DFYQAAMQRLVREDFRGNKERFVQVCFYMGLQKKQAKSSEEFQQLLEEHL QTHLPELNEMDLAVVSNAAYKTSTLVTGEAKTAYEARLVNAILNLEINTG SDALLVSFVKALRLQQVKDERVCQHLQDICLDPVKITHIEPRGLAHIFAF FAEQLWDQNECLTVVVKRLMTLLKPGDLRSKDLATFLWASAQLNCALTPE EIRQLELTALRKLDHGEYEYFPDNLVDTCLSLCTLGHYSKDLINAAEELK AAQKRQRAQPKVDSRLIVLRSAVAIEQPSIAKVKTERAFKEFDGAPAYLL KDRPDLTKYAQELSGDADVEGVDVVCPIVGINLPSLRVQTMGAQESVYFV ELLTAEQTLKFSKKPTSLIRLKKRLLESLGRKVVVLNSTEMATNAKELRQ LLEPAANAGEESKVAQGVGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15730-PA | 571 | GF15730-PA | 1..571 | 1..570 | 2292 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10071-PA | 571 | GG10071-PA | 1..571 | 1..570 | 2730 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11060-PA | 573 | GH11060-PA | 1..567 | 1..565 | 1883 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4619-PB | 570 | CG4619-PB | 1..570 | 1..570 | 2878 | 100 | Plus |
CG4619-PA | 570 | CG4619-PA | 1..570 | 1..570 | 2878 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17577-PA | 576 | GI17577-PA | 1..576 | 1..570 | 1817 | 62.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18948-PA | 571 | GL18948-PA | 1..571 | 1..570 | 2240 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18307-PA | 571 | GA18307-PA | 1..571 | 1..570 | 2248 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17821-PA | 570 | GM17821-PA | 1..570 | 1..570 | 2887 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23642-PA | 251 | GD23642-PA | 1..251 | 320..570 | 1239 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17919-PA | 576 | GJ17919-PA | 1..576 | 1..570 | 1884 | 63.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15578-PA | 567 | GK15578-PA | 1..566 | 1..569 | 1958 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18883-PA | 571 | GE18883-PA | 1..571 | 1..570 | 2731 | 89 | Plus |