BDGP Sequence Production Resources |
Search the DGRC for LD45742
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 457 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | bocksbeutel-RA |
Protein status: | LD45742.pep: gold |
Preliminary Size: | 1654 |
Sequenced Size: | 1498 |
Gene | Date | Evidence |
---|---|---|
CG9424 | 2001-01-01 | Release 2 assignment |
CG9424 | 2001-11-30 | Blastp of sequenced clone |
CG9424 | 2003-01-01 | Sim4 clustering to Release 3 |
bocksbeutel | 2008-04-29 | Release 5.5 accounting |
bocksbeutel | 2008-08-15 | Release 5.9 accounting |
bocksbeutel | 2008-12-18 | 5.12 accounting |
1498 bp (1498 high quality bases) assembled on 2001-11-30
GenBank Submission: AY069685
> LD45742.complete TGACGACATTGCTATTTTTGTGTGTTTTGAGTTTCACCACGGCGGAAAAT AATGTCGGACCTTTCTTACCTGGACACGTTGGGCAACAAGGAGCTGCTGG CCAAGTGCCTGGAGCACGGCCTGCCCGGTGTTCCCGTGACGGACAGCACC CGCAGCGTCATAATTCGCCGACTAAAGGCCAAAATCACCGGGGTTCCGCT GAACAAAAGCAAATCTGCAAGTAAGAAAGCGATTCCGAGGCGTGAGACCG TACACGGCAGCCAGGTAACGACGCCCACATCGGAGCCAGTGCGTCGTACG CCCGGCAAGAGTGCAGGACGCACTAGCAGCAACAACAACAAGATCAGCGA ACAAAGTCGTCGCACAATCGCCTATGGACTAGACAACACCTCGATCTCGG GAAGATCTGTGCAGACTACTACCACGGTGTCGGATATGAGCTCCCAGTCG GAGGACGACGACTCCTACATGGTGGACTCTCCGGTGCCTAATTACTCCAA GGACCAGCAGCCTAGACGTTATGTTTCTCTAGCCAAATCCGGAGTTTTGA CCACATCTTACACACGCGAAGTTGACCAGCCGCTGTACGAACAGGAGGAT ATACCACGCAGCTACACCTACGAAAGACCCCATGTGCCAGCCGCCACTCT TCACGCACTTCCCACATACGAGCCACGCATCGAACCTTCGACATACAGAC CCACAGATTTGGGTTTTTCGCGTCCCCTGCTGACTCAAACCAACTTAAAC TCAACCAGCTACGAGGAGTCATCTACGTACAATCCAAAACTTTCACCCAT TTCGCCAAGAAACACTTTCAGCGGATCCGCTAGGCCTTTTGGTGGCCCAG CACCAGCTCCAGCACCCATTCGCCAGCGACAGAGTGTTCCAGTTAGTGGA TCCAATCTGGCCCGTGGTCGCCTGCTCCAGCCGACCACCGCAGTAAACAC TCTATATCCACAACTAAATGAATTCTACGATCAGCCGAATGACGCAGGCG AACCCATGGAGACGGAGAGCGAGTCCGAAGTCGAGGAAGTACCCATCAAT AGCCATTTCCAAAAGAATCGCTTCTCGCCGCTGGCTAGAAAACCTCTGTG TCAGTGATGCTGGCCACCATGGTGTACGTGGTATTGACACCCAACGCCTG AGAAGCGTTCATATCGCGGAATACATTTGGTTTTGGTTACTCCACGCATT TCAACCACAGACTACAGCGAAGGAATATTTATGACGACTTTGCACCTTAA GACTACTACTTCAATTCCAAACATGTTCAAAACTAACAAATATTCAACTC AATTTGCCAAGTCTTTAATTGCTTGTTCTCGCATATTGTTTCTTTTTATA CATAATTAGAAAAATGTACTACATTATAATTATTGTATTGTATTAAATAA ACTAATTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bocksbeutel-RA | 1638 | bocksbeutel-RA | 226..1638 | 1..1413 | 7065 | 100 | Plus |
bocksbeutel.a | 1638 | bocksbeutel.a | 226..1638 | 1..1413 | 7065 | 100 | Plus |
bocksbeutel-RB | 1520 | bocksbeutel-RB | 8..1105 | 1..1098 | 5490 | 100 | Plus |
bocksbeutel-RB | 1520 | bocksbeutel-RB | 1205..1520 | 1098..1413 | 1580 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 1974..2032 | 1351..1413 | 153 | 74.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2681..2834 | 195..350 | 116 | 60.5 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1129..1166 | 313..351 | 111 | 79.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5415292..5415606 | 1099..1413 | 100 | <- | Minus |
chr3R | 5415707..5416804 | 1..1098 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 1..1056 | 52..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 1..1056 | 52..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 1..1056 | 52..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 1..1056 | 52..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 1..1056 | 52..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 8..1418 | 1..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 8..1420 | 1..1413 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 23..1435 | 1..1413 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 8..1418 | 1..1411 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
bocksbeutel-RA | 23..1435 | 1..1413 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9589468..9589782 | 1099..1413 | 100 | <- | Minus |
3R | 9589883..9590980 | 1..1098 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9589468..9589782 | 1099..1413 | 100 | <- | Minus |
3R | 9589883..9590980 | 1..1098 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9589468..9589782 | 1099..1413 | 100 | <- | Minus |
3R | 9589883..9590980 | 1..1098 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5415190..5415504 | 1099..1413 | 100 | <- | Minus |
arm_3R | 5415605..5416702 | 1..1098 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9330299..9330613 | 1099..1413 | 100 | <- | Minus |
3R | 9330714..9331811 | 1..1098 | 100 | Minus |
Translation from 51 to 1106
> LD45742.pep MSDLSYLDTLGNKELLAKCLEHGLPGVPVTDSTRSVIIRRLKAKITGVPL NKSKSASKKAIPRRETVHGSQVTTPTSEPVRRTPGKSAGRTSSNNNKISE QSRRTIAYGLDNTSISGRSVQTTTTVSDMSSQSEDDDSYMVDSPVPNYSK DQQPRRYVSLAKSGVLTTSYTREVDQPLYEQEDIPRSYTYERPHVPAATL HALPTYEPRIEPSTYRPTDLGFSRPLLTQTNLNSTSYEESSTYNPKLSPI SPRNTFSGSARPFGGPAPAPAPIRQRQSVPVSGSNLARGRLLQPTTAVNT LYPQLNEFYDQPNDAGEPMETESESEVEEVPINSHFQKNRFSPLARKPLC Q*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16530-PA | 403 | GF16530-PA | 1..321 | 1..315 | 1107 | 71.1 | Plus |
Dana\GF12772-PA | 481 | GF12772-PA | 1..68 | 1..67 | 157 | 48.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17352-PA | 399 | GG17352-PA | 1..351 | 1..351 | 1465 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19297-PA | 434 | GH19297-PA | 1..347 | 1..335 | 659 | 49.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bocks-PA | 351 | CG9424-PA | 1..351 | 1..351 | 1811 | 100 | Plus |
bocks-PB | 399 | CG9424-PB | 1..349 | 1..349 | 1797 | 100 | Plus |
Ote-PA | 424 | CG5581-PA | 1..283 | 1..249 | 173 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23513-PA | 425 | GI23513-PA | 1..369 | 1..346 | 593 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22173-PA | 399 | GL22173-PA | 1..347 | 1..349 | 847 | 56.5 | Plus |
Dper\GL16712-PA | 211 | GL16712-PA | 1..110 | 1..118 | 144 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21776-PA | 398 | GA21776-PA | 1..346 | 1..349 | 847 | 56.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26238-PA | 399 | GM26238-PA | 1..351 | 1..351 | 1636 | 92 | Plus |
Dsec\GM19914-PA | 424 | GM19914-PA | 1..64 | 1..67 | 156 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20779-PA | 373 | GD20779-PA | 1..325 | 1..351 | 1359 | 81.3 | Plus |
Dsim\GD25400-PA | 424 | GD25400-PA | 1..64 | 1..67 | 156 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10265-PA | 419 | GJ10265-PA | 1..363 | 1..346 | 770 | 53.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12790-PA | 408 | GK12790-PA | 5..361 | 7..351 | 635 | 44.6 | Plus |
Dwil\GK12789-PA | 479 | GK12789-PA | 1..89 | 4..94 | 195 | 47.5 | Plus |
Dwil\GK23240-PA | 404 | GK23240-PA | 1..88 | 1..83 | 159 | 43.2 | Plus |
Translation from 51 to 1106
> LD45742.hyp MSDLSYLDTLGNKELLAKCLEHGLPGVPVTDSTRSVIIRRLKAKITGVPL NKSKSASKKAIPRRETVHGSQVTTPTSEPVRRTPGKSAGRTSSNNNKISE QSRRTIAYGLDNTSISGRSVQTTTTVSDMSSQSEDDDSYMVDSPVPNYSK DQQPRRYVSLAKSGVLTTSYTREVDQPLYEQEDIPRSYTYERPHVPAATL HALPTYEPRIEPSTYRPTDLGFSRPLLTQTNLNSTSYEESSTYNPKLSPI SPRNTFSGSARPFGGPAPAPAPIRQRQSVPVSGSNLARGRLLQPTTAVNT LYPQLNEFYDQPNDAGEPMETESESEVEEVPINSHFQKNRFSPLARKPLC Q*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
bocksbeutel-PA | 351 | CG9424-PA | 1..351 | 1..351 | 1811 | 100 | Plus |
bocksbeutel-PB | 399 | CG9424-PB | 1..349 | 1..349 | 1797 | 100 | Plus |
Ote-PA | 424 | CG5581-PA | 1..283 | 1..249 | 173 | 25.1 | Plus |