BDGP Sequence Production Resources |
Search the DGRC for LD45776
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 457 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | Stim-RA |
Protein status: | LD45776.pep: gold |
Preliminary Size: | 2275 |
Sequenced Size: | 2257 |
Gene | Date | Evidence |
---|---|---|
CG9126 | 2001-11-29 | Blastp of sequenced clone |
CG9126 | 2003-01-01 | Sim4 clustering to Release 3 |
Stim | 2008-04-29 | Release 5.5 accounting |
Stim | 2008-08-15 | Release 5.9 accounting |
Stim | 2008-12-18 | 5.12 accounting |
2257 bp (2257 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069686
> LD45776.complete ACACCGTTCAACCCAAACTGACTCGGGAATTTTAGGGATATCATCAGTTG AAAACTATGACTTTCGCGAGCAACAAATTTGATTTGTAAACTTATAAGAA ACCGAGCCGATTTACCGATTTAAAGGAGACATATGCGATAATTTGTATTG AAGAAGTCCGCACACAATTCGTAACAATGCGAAAGAATACCATTTGGAAC TACTCTTTAATATTCTTCTGCTGTGTGCTGAAGAGCATAAGTACGCTAGA TCATGGCCCGCACACAGTATCAGTCGATTCGAATCGACACAACACACAGC ATCAGTATAAGCAAAATCCCAATGTTGCCTCACAACGTCACTCATCCCAC GAATCTGGTCAGAGTTTACACAATTCGCAATCGGAACATGTCACCCATAT TGCCGCATCGCACGCCGGAAGCGGCGGAGAGCACTCCACTCATTTGGCGC AAAATCTGCACAGGAGCTCATATAATCTTCTGAGCGAGGCCATGTCCCAG GCTGTCAGCAATGAATTTAGTTCCATGGGAAGTGGTTCAGCGGATGGAGC GTGTGCTGCTGATGATTTTGATTGCTACAGTGGAAGTGTTCAGGATCGCT TTGGCATGGAGGCTATTGCCAGCTTGCATCGTCAGCTAGATGATGACGAT AATGGAAACATCGATCTGAGCGAGTCCGATGACTTTTTGCGGGAGGAATT GAAGTACGACTCGGGCTACGAAAAGCGGCAGAAAGCGTTTCACTTCAATG ACGATATGCATATATCGGTCAAAGAACTTTGGGAGGCCTGGCTCAGATCG GAGGTGCATAATTGGACCATCGAGCAGACCACCGATTGGCTGGCTCAGTC CGTTCAGCTGCCGCAATACGTTGATCTGTTCAAATTACACAAGGTTACTG GCGCTGCCTTGCCAAGATTGGCTGTGAATAATCTTCAGTATGTTGGCAAT GTACTTGGCATCAAAGACCCTATACACAAACAAAAAATCTCATTGAAGGC AATGGATGTGGTTCTGTTTGGGCCACCGCGAGAAACTGGTACCCGCTGGA AAGACTACATATTGGTAACACTGTTGCTTAGTGCTATTATTGGTTGTTGG TACGCCTATCAGCAAAATAAGAATGCCAAACGGCATCTGCGTCGAATGGC CCAGGATATGGAGGGATTGCAGAGGGCTGAGCAAAGTCTACAGGAGATGC AGAAGGAACTAGAACGGGCCAGAATGGAGCAGGAAAATGTGGCAACAGAA AAACTAGATTTGGAGCGTCGTCTAAAAGAAGCGCCCACTCTCAGTTCATC GAACTCGGATTTGGAAGTTCAGCAGCTGAAAAAGGAAATCGAGATGTTGC GCAACGAATTGTCCCGCGCCGAATTCGAGCTAGTAGACAACTGCTGGTCA CCGCCGCCACAACTGCAATCATGGCTTCAATACACATATGAACTAGAAAG TAAGAATCATCAGAAGAAGCGCACGTCGGCTGAGAAGCAGCTACAGTCGG CCAGAGAGGCTTGTGAGAAATTGCGTAAGAAACGGTCAAGTTTGGTGGGT GCGTTCGTTTCCACGCACGGAAAGAGTATTGATGATGTGGATCGGTCGAT TGTTGAGGCACGGAATGCCCTCGGAGATGTAACAAACGAGCTGCAAGAAC GACTGCATCGCTGGAAGCAAATCGAGACGTGCCTTGGCTTAAACATTGTG AACAACAATGGTCTGCCCTACTTGGAGAATGTTCTGTACGGTCGAAATGG GGGCTTACAAAGTTCCATGGGCATGAGTTCAACCAAGGGTTCTAGAGCAC GTATTACCAACAGCACCGAAGACCTGGACGATGAGTCCATACAAGGTAAG CTGAATTTTGAGAACTTTTCGCTGCTTGCCACGGAATAAGGCTTGTGCGC TCGGTCTGTGAGGACAATAAAACCCAGCTCTTCAGAAAAGCATACTACTT GACGAACTAAATAAAATTATAAAACCGCTTATTGAACCCTGAATGAAATC TGTTTTACATTAAGCTACTGTATTAATGAAGGTCATATAACATTATGTGT GTGTATGATATTTTAATCTTTATATTTGTAATATATCCATTTTATTTTTG ATGTATACAAAATGTCATCTACTTAATTTTTTGTCAAAAACAACGAATAC TATAAAACCATACTGAGTTTTGTACGTAACAATGAACTTATGAATGGTGA TCCACTTAGTGGATTATTTAAATAAAGAAATAAAGTATTAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stim-RA | 2442 | Stim-RA | 203..2442 | 1..2240 | 11200 | 100 | Plus |
Stim-RC | 2036 | Stim-RC | 315..2036 | 519..2240 | 8610 | 100 | Plus |
Stim-RB | 2419 | Stim-RB | 699..2419 | 520..2240 | 8605 | 100 | Plus |
Stim-RB | 2419 | Stim-RB | 76..596 | 1..521 | 2605 | 100 | Plus |
Stim-RC | 2036 | Stim-RC | 76..317 | 1..242 | 1210 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15825263..15825856 | 1797..1204 | 2970 | 100 | Minus |
chrX | 22417052 | chrX | 15828602..15829087 | 521..36 | 2415 | 99.8 | Minus |
chrX | 22417052 | chrX | 15824747..15825190 | 2239..1796 | 2220 | 100 | Minus |
chrX | 22417052 | chrX | 15826638..15826877 | 923..684 | 1170 | 99.2 | Minus |
chrX | 22417052 | chrX | 15825921..15826096 | 1206..1031 | 865 | 99.4 | Minus |
chrX | 22417052 | chrX | 15827437..15827600 | 683..520 | 820 | 100 | Minus |
chrX | 22417052 | chrX | 15826165..15826282 | 1032..915 | 590 | 100 | Minus |
chrX | 22417052 | chrX | 15830245..15830281 | 37..1 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15935417..15936010 | 1797..1204 | 2970 | 100 | Minus |
X | 23542271 | X | 15938756..15939241 | 521..36 | 2430 | 100 | Minus |
X | 23542271 | X | 15934899..15935344 | 2241..1796 | 2230 | 100 | Minus |
X | 23542271 | X | 15936792..15937031 | 923..684 | 1170 | 99.2 | Minus |
X | 23542271 | X | 15936075..15936250 | 1206..1031 | 880 | 100 | Minus |
X | 23542271 | X | 15937591..15937754 | 683..520 | 820 | 100 | Minus |
X | 23542271 | X | 15936319..15936436 | 1032..915 | 590 | 100 | Minus |
X | 23542271 | X | 15940399..15940435 | 37..1 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15943515..15944108 | 1797..1204 | 2970 | 100 | Minus |
X | 23527363 | X | 15946854..15947339 | 521..36 | 2430 | 100 | Minus |
X | 23527363 | X | 15942997..15943442 | 2241..1796 | 2230 | 100 | Minus |
X | 23527363 | X | 15944890..15945129 | 923..684 | 1170 | 99.1 | Minus |
X | 23527363 | X | 15944173..15944348 | 1206..1031 | 880 | 100 | Minus |
X | 23527363 | X | 15945689..15945852 | 683..520 | 820 | 100 | Minus |
X | 23527363 | X | 15944417..15944534 | 1032..915 | 590 | 100 | Minus |
X | 23527363 | X | 15948497..15948533 | 37..1 | 185 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 1087..1153 | 2104..2043 | 134 | 71.6 | Minus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1344..1411 | 2115..2048 | 132 | 69.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15824747..15825188 | 1798..2239 | 100 | <- | Minus |
chrX | 15825263..15825854 | 1206..1797 | 100 | <- | Minus |
chrX | 15825922..15826094 | 1033..1205 | 99 | <- | Minus |
chrX | 15826165..15826280 | 917..1032 | 100 | <- | Minus |
chrX | 15826645..15826877 | 684..916 | 100 | <- | Minus |
chrX | 15827437..15827600 | 520..683 | 100 | <- | Minus |
chrX | 15828604..15829086 | 37..519 | 99 | <- | Minus |
chrX | 15830246..15830281 | 1..36 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..1713 | 177..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..1713 | 177..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..1713 | 177..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..1713 | 177..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..1713 | 177..1889 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..2239 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 76..2314 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 17..2255 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 1..2239 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Stim-RA | 17..2255 | 1..2239 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15936319..15936434 | 917..1032 | 100 | <- | Minus |
X | 15937591..15937754 | 520..683 | 100 | <- | Minus |
X | 15940400..15940435 | 1..36 | 100 | Minus | |
X | 15936799..15937031 | 684..916 | 100 | <- | Minus |
X | 15936076..15936248 | 1033..1205 | 100 | <- | Minus |
X | 15934901..15935342 | 1798..2239 | 100 | <- | Minus |
X | 15935417..15936008 | 1206..1797 | 100 | <- | Minus |
X | 15938758..15939240 | 37..519 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15936319..15936434 | 917..1032 | 100 | <- | Minus |
X | 15937591..15937754 | 520..683 | 100 | <- | Minus |
X | 15940400..15940435 | 1..36 | 100 | Minus | |
X | 15936799..15937031 | 684..916 | 100 | <- | Minus |
X | 15936076..15936248 | 1033..1205 | 100 | <- | Minus |
X | 15934901..15935342 | 1798..2239 | 100 | <- | Minus |
X | 15935417..15936008 | 1206..1797 | 100 | <- | Minus |
X | 15938758..15939240 | 37..519 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15936319..15936434 | 917..1032 | 100 | <- | Minus |
X | 15937591..15937754 | 520..683 | 100 | <- | Minus |
X | 15940400..15940435 | 1..36 | 100 | Minus | |
X | 15936799..15937031 | 684..916 | 100 | <- | Minus |
X | 15936076..15936248 | 1033..1205 | 100 | <- | Minus |
X | 15934901..15935342 | 1798..2239 | 100 | <- | Minus |
X | 15935417..15936008 | 1206..1797 | 100 | <- | Minus |
X | 15938758..15939240 | 37..519 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15830832..15831064 | 684..916 | 100 | <- | Minus |
arm_X | 15828934..15829375 | 1798..2239 | 100 | <- | Minus |
arm_X | 15829450..15830041 | 1206..1797 | 100 | <- | Minus |
arm_X | 15830109..15830281 | 1033..1205 | 100 | <- | Minus |
arm_X | 15830352..15830467 | 917..1032 | 100 | <- | Minus |
arm_X | 15831624..15831787 | 520..683 | 100 | <- | Minus |
arm_X | 15832791..15833273 | 37..519 | 100 | <- | Minus |
arm_X | 15834433..15834468 | 1..36 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15942999..15943440 | 1798..2239 | 100 | <- | Minus |
X | 15943515..15944106 | 1206..1797 | 100 | <- | Minus |
X | 15944174..15944346 | 1033..1205 | 100 | <- | Minus |
X | 15944417..15944532 | 917..1032 | 100 | <- | Minus |
X | 15944897..15945129 | 684..916 | 100 | <- | Minus |
X | 15945689..15945852 | 520..683 | 100 | <- | Minus |
X | 15946856..15947338 | 37..519 | 100 | <- | Minus |
X | 15948498..15948533 | 1..36 | 100 | Minus |
Translation from 176 to 1888
> LD45776.pep MRKNTIWNYSLIFFCCVLKSISTLDHGPHTVSVDSNRHNTQHQYKQNPNV ASQRHSSHESGQSLHNSQSEHVTHIAASHAGSGGEHSTHLAQNLHRSSYN LLSEAMSQAVSNEFSSMGSGSADGACAADDFDCYSGSVQDRFGMEAIASL HRQLDDDDNGNIDLSESDDFLREELKYDSGYEKRQKAFHFNDDMHISVKE LWEAWLRSEVHNWTIEQTTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAV NNLQYVGNVLGIKDPIHKQKISLKAMDVVLFGPPRETGTRWKDYILVTLL LSAIIGCWYAYQQNKNAKRHLRRMAQDMEGLQRAEQSLQEMQKELERARM EQENVATEKLDLERRLKEAPTLSSSNSDLEVQQLKKEIEMLRNELSRAEF ELVDNCWSPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKLR KKRSSLVGAFVSTHGKSIDDVDRSIVEARNALGDVTNELQERLHRWKQIE TCLGLNIVNNNGLPYLENVLYGRNGGLQSSMGMSSTKGSRARITNSTEDL DDESIQGKLNFENFSLLATE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10709-PA | 465 | GF10709-PA | 1..429 | 1..468 | 1812 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19358-PA | 569 | GG19358-PA | 1..569 | 1..570 | 3035 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12177-PA | 575 | GH12177-PA | 1..575 | 1..570 | 2333 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stim-PA | 570 | CG9126-PA | 1..570 | 1..570 | 2971 | 100 | Plus |
Stim-PD | 561 | CG9126-PD | 1..557 | 1..557 | 2907 | 100 | Plus |
Stim-PF | 117 | CG9126-PF | 1..117 | 1..117 | 617 | 99.1 | Plus |
Stim-PG | 117 | CG9126-PG | 1..117 | 1..117 | 617 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14178-PA | 571 | GI14178-PA | 1..571 | 1..570 | 2338 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16222-PA | 221 | GL16222-PA | 1..221 | 350..570 | 1089 | 92.3 | Plus |
Dper\GL16223-PA | 101 | GL16223-PA | 24..101 | 170..247 | 426 | 98.7 | Plus |
Dper\GL16221-PA | 81 | GL16221-PA | 1..81 | 276..360 | 374 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27643-PA | 221 | GA27643-PA | 1..221 | 350..570 | 1089 | 92.3 | Plus |
Dpse\GA27864-PA | 78 | GA27864-PA | 1..78 | 170..247 | 426 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22508-PA | 577 | GM22508-PA | 1..568 | 1..568 | 3042 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15772-PA | 111 | GD15772-PA | 81..111 | 540..570 | 155 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18461-PA | 575 | GJ18461-PA | 1..575 | 1..570 | 2288 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16254-PA | 959 | GK16254-PA | 4..597 | 5..565 | 2347 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16005-PA | 569 | GE16005-PA | 1..569 | 1..570 | 3043 | 99.3 | Plus |
Translation from 176 to 1888
> LD45776.hyp MRKNTIWNYSLIFFCCVLKSISTLDHGPHTVSVDSNRHNTQHQYKQNPNV ASQRHSSHESGQSLHNSQSEHVTHIAASHAGSGGEHSTHLAQNLHRSSYN LLSEAMSQAVSNEFSSMGSGSADGACAADDFDCYSGSVQDRFGMEAIASL HRQLDDDDNGNIDLSESDDFLREELKYDSGYEKRQKAFHFNDDMHISVKE LWEAWLRSEVHNWTIEQTTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAV NNLQYVGNVLGIKDPIHKQKISLKAMDVVLFGPPRETGTRWKDYILVTLL LSAIIGCWYAYQQNKNAKRHLRRMAQDMEGLQRAEQSLQEMQKELERARM EQENVATEKLDLERRLKEAPTLSSSNSDLEVQQLKKEIEMLRNELSRAEF ELVDNCWSPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKLR KKRSSLVGAFVSTHGKSIDDVDRSIVEARNALGDVTNELQERLHRWKQIE TCLGLNIVNNNGLPYLENVLYGRNGGLQSSMGMSSTKGSRARITNSTEDL DDESIQGKLNFENFSLLATE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Stim-PA | 570 | CG9126-PA | 1..570 | 1..570 | 2971 | 100 | Plus |
Stim-PD | 561 | CG9126-PD | 1..557 | 1..557 | 2907 | 100 | Plus |
Stim-PF | 117 | CG9126-PF | 1..117 | 1..117 | 617 | 99.1 | Plus |
Stim-PG | 117 | CG9126-PG | 1..117 | 1..117 | 617 | 99.1 | Plus |