BDGP Sequence Production Resources |
Search the DGRC for LD45836
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 458 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | Vps37B-RA |
Protein status: | LD45836.pep: gold |
Preliminary Size: | 1066 |
Sequenced Size: | 949 |
Gene | Date | Evidence |
---|---|---|
CG1115 | 2001-01-01 | Release 2 assignment |
CG1115 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1115 | 2003-02-27 | Blastp of sequenced clone |
CG1115 | 2008-04-29 | Release 5.5 accounting |
CG1115 | 2008-08-15 | Release 5.9 accounting |
CG1115 | 2008-12-18 | 5.12 accounting |
949 bp (949 high quality bases) assembled on 2003-02-27
GenBank Submission: AY069687
> LD45836.complete TTGCAGAGGGTCAGCGAAGATGTACCAGGAATACCTATACCAACTGCGGG CCACCATCACCCCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGAT GACGACAAGCTGGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAAC ACAAAAGACCAGTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATA TCGAGCGGGAGCCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTC TCGGAGGATGGGCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACA GCTCAAGGAGAAGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGC TGCAGACAGCTGCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAG AAGTTCAACGACAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCT CCCTATCCGGAGGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGC AGGAGCTGATGCGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTG CCAGCCTACGGAAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGG CTCCGCCCCTTACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCAT CCAGACCGTACTGAGGTCTTGGTCCTTGGTCCTTGGTCCTCAGCGAATTA ACTGCCATGGCGCATCAGTCTGCAGCAGAATCCTCTCTTTAAGTACATAT TGCTTCAGTTTCATCTTCTGATTACAGTGGGTTAATTGCAAATCAGAGGG AACTTTCTGGTACACACATCTCTGCCTGCACTAAACTATGATATATATGT ATATGTGAAAGTATAAATTAAGCGAAAATTAACATTAATATTAGACAGTG GACATTTCTTGTTAAAATAAAAACTTTCGATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1115-RA | 1083 | CG1115-RA | 153..1083 | 1..931 | 4655 | 100 | Plus |
katanin-60.c | 2351 | katanin-60.c | 2107..2318 | 937..726 | 1060 | 100 | Minus |
katanin-60.b | 2672 | katanin-60.b | 2428..2639 | 937..726 | 1060 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
baggins | 5453 | baggins BAGGINS 5453bp | 998..1050 | 257..309 | 111 | 74.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1051915..1052642 | 1..728 | 100 | -> | Plus |
chr3R | 1052988..1053190 | 729..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 1..645 | 20..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RC | 1..645 | 20..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 1..645 | 20..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 1..645 | 20..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps37B-RA | 1..645 | 20..664 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 92..1026 | 1..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 92..1022 | 1..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 94..1024 | 1..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1115-RA | 92..1026 | 1..931 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps37B-RA | 94..1024 | 1..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5226251..5226978 | 1..728 | 100 | -> | Plus |
3R | 5227324..5227526 | 729..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5226251..5226978 | 1..728 | 100 | -> | Plus |
3R | 5227324..5227526 | 729..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5226251..5226978 | 1..728 | 100 | -> | Plus |
3R | 5227324..5227526 | 729..931 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1053046..1053248 | 729..931 | 100 | Plus | |
arm_3R | 1051973..1052700 | 1..728 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4967082..4967809 | 1..728 | 100 | -> | Plus |
3R | 4968155..4968357 | 729..931 | 100 | Plus |
Translation from 0 to 663
> LD45836.hyp CRGSAKMYQEYLYQLRATITPMCHEELKELLNDDDKLDEKVDEVLQVLRT QKTSVFEDNRSRAERNIEREPQIIELRGQLAELSEDGRTRCSSVQEKLSQ LKEKSGGVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFL PIRRTMHLRRLKAEKMQELMRKQRQGPGPNTSLPAYGNVPSSGFYPASGG SAPYPIMGPLMPMPPPSRPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vps37B-PC | 214 | CG1115-PC | 1..214 | 7..220 | 1097 | 100 | Plus |
Vps37B-PB | 214 | CG1115-PB | 1..214 | 7..220 | 1097 | 100 | Plus |
Vps37B-PA | 214 | CG1115-PA | 1..214 | 7..220 | 1097 | 100 | Plus |
Translation from 19 to 663
> LD45836.pep MYQEYLYQLRATITPMCHEELKELLNDDDKLDEKVDEVLQVLRTQKTSVF EDNRSRAERNIEREPQIIELRGQLAELSEDGRTRCSSVQEKLSQLKEKSG GVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFLPIRRTM HLRRLKAEKMQELMRKQRQGPGPNTSLPAYGNVPSSGFYPASGGSAPYPI MGPLMPMPPPSRPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18928-PA | 214 | GF18928-PA | 1..196 | 1..196 | 665 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12671-PA | 213 | GG12671-PA | 1..197 | 1..198 | 885 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17720-PA | 216 | GH17720-PA | 1..196 | 1..194 | 676 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vps37B-PC | 214 | CG1115-PC | 1..214 | 1..214 | 1097 | 100 | Plus |
Vps37B-PB | 214 | CG1115-PB | 1..214 | 1..214 | 1097 | 100 | Plus |
Vps37B-PA | 214 | CG1115-PA | 1..214 | 1..214 | 1097 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22540-PA | 222 | GI22540-PA | 1..200 | 1..192 | 663 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21633-PA | 226 | GL21633-PA | 1..205 | 1..202 | 745 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10797-PA | 226 | GA10797-PA | 1..205 | 1..202 | 756 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10794-PA | 214 | GM10794-PA | 1..214 | 1..214 | 1078 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19768-PA | 214 | GD19768-PA | 1..214 | 1..214 | 1085 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10145-PA | 223 | GJ10145-PA | 1..205 | 1..200 | 679 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12961-PA | 221 | GK12961-PA | 1..196 | 1..192 | 631 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25454-PA | 213 | GE25454-PA | 1..195 | 1..196 | 862 | 86.7 | Plus |