BDGP Sequence Production Resources |
Search the DGRC for LD45860
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 458 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | REG-RA |
Protein status: | LD45860.pep: gold |
Preliminary Size: | 1502 |
Sequenced Size: | 1381 |
Gene | Date | Evidence |
---|---|---|
CG1591 | 2001-01-01 | Release 2 assignment |
CG1591 | 2001-11-29 | Blastp of sequenced clone |
CG1591 | 2003-01-01 | Sim4 clustering to Release 3 |
REG | 2008-04-29 | Release 5.5 accounting |
REG | 2008-08-15 | Release 5.9 accounting |
REG | 2008-12-18 | 5.12 accounting |
1381 bp (1381 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069688
> LD45860.complete CACCACATGCGTGTTGTTGCTTGGGCATCAAAATTTGTCGACGGTCCGCG TTGCTGATTGTTATTGAGAAGATAAGGAACGAGAAGAACCGGTACTACGC CAGGAGACAGGACTCAGGATCAAAGGCTTCCACGGACACGAAAAGGAATC CACATAGCTAACGAAATGCCTAACGACACTGTGGTAAAGGTGCAGGAGTA CAAGGACTCGTTGATCCTCAAGGCAGAGCTGCTAATCACCAAGGGGTTCC CGGAGAATATCGTCCGGCTGAACGAGCTGCTGGCCACGCCGATCTTCAAC GAGCGCAACTTCGAAGAAGTGCACCAGGACCTCAACATCCCGGTCCTGCC GCCTCTCCTGGTTAAAAACGAGTTGGAGGATCGTGACAGTCTGCCCACCA AGCGCCAGCGCGTGGATGTCATCGTCTCTGGGCAGCCTGTCATGGGTCTG CCCGCCGGTACAGTGCCGTGCAACAAGCCGCTCTGCGAGATGATCAAGGT CGTCAAGCCTATCATCAGGAAGCTTGTGGAGGATTCCAATCTACTTAAGA TGTGGATCTCCTTTATGATACCCAAGATCGAGGATGGCAACAACTTTGGC GTCTCCATTCAAGAGGACACGCTTGCCGAAATTCAAACTGTGGAATCCGA GGCGGCCGCCTTCTTTGACCAGATATCGCGCTATTTCTTGTCGCGCGCCA AGGTGGTGTCCAAGGTGGCCAAGTATCCGCACATCGATGATTATCGGCGC GCAGTCGTCGAACTTGACGAGAAGGAGTACCTCAGCTTGTGGCTGGTCGT TTGTGAGGTCCGCAATCGCTACTCCTCGCTGCACGACATTGTTATTAAGA ACCTCGAGAAGCTAAAGAAGCCGCGCTCCTCAAATACCGAAAGCCTGTAT TAGGCTAGGTATTTCCGAAGCCCGAGCCTCAACTTTTTTTTTTCCTTTCC ATCATCTTACTTTTCAATCAATAATCAGCCCGTAGAGCGGACGGTCAGCA ATTCTTGTCGCTACTCAAAAAGCTAAGATTTTCCAATTCGGTTTACAAAC ATCAAAATTCTTTAATTGAAGAGCAGTGATTGAACAATAGCTGTAGCCTA ACTACCATCAACTATTAATCCATTTGTACTACGTCTAGAATGTAATGTTG AGATTGGCGTACAATACAAGAAACCGATGCTGTATAGATTCCACTAATAG CTATAGCTATGCATAAAAAGAATAGGCGAGCTCCATTGACACATTTTTTC AACATTTCCTAATGTAAATTTATAACACGGGCGCCCCTCATACGGAAAAT GTCCTTAAAAATGTGTGAAATATAAATCTTTATAAGTAATTCGCTCCGAA TAGGTAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
REG-RA | 1896 | REG-RA | 147..1503 | 1..1357 | 6785 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 13104033..13104852 | 536..1355 | 4070 | 99.8 | Plus |
chrX | 22417052 | chrX | 13103339..13103834 | 40..535 | 2480 | 100 | Plus |
chrX | 22417052 | chrX | 13103229..13103268 | 1..40 | 200 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 657..768 | 226..333 | 118 | 58.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 13103229..13103268 | 1..40 | 100 | -> | Plus |
chrX | 13103340..13103834 | 41..535 | 100 | -> | Plus |
chrX | 13104033..13104852 | 536..1355 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 1..738 | 166..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 1..738 | 166..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 1..738 | 166..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 1..738 | 166..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 1..738 | 166..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 21..1375 | 1..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 21..1375 | 1..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 16..1370 | 1..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 21..1375 | 1..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
REG-RA | 16..1370 | 1..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13212353..13212392 | 1..40 | 100 | -> | Plus |
X | 13212464..13212958 | 41..535 | 100 | -> | Plus |
X | 13213156..13213975 | 536..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13212353..13212392 | 1..40 | 100 | -> | Plus |
X | 13212464..13212958 | 41..535 | 100 | -> | Plus |
X | 13213156..13213975 | 536..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13212353..13212392 | 1..40 | 100 | -> | Plus |
X | 13212464..13212958 | 41..535 | 100 | -> | Plus |
X | 13213156..13213975 | 536..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 13106386..13106425 | 1..40 | 100 | -> | Plus |
arm_X | 13106497..13106991 | 41..535 | 100 | -> | Plus |
arm_X | 13107189..13108008 | 536..1355 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 13220562..13221056 | 41..535 | 100 | -> | Plus |
X | 13221254..13222073 | 536..1355 | 100 | Plus | |
X | 13220451..13220490 | 1..40 | 100 | -> | Plus |
Translation from 165 to 902
> LD45860.pep MPNDTVVKVQEYKDSLILKAELLITKGFPENIVRLNELLATPIFNERNFE EVHQDLNIPVLPPLLVKNELEDRDSLPTKRQRVDVIVSGQPVMGLPAGTV PCNKPLCEMIKVVKPIIRKLVEDSNLLKMWISFMIPKIEDGNNFGVSIQE DTLAEIQTVESEAAAFFDQISRYFLSRAKVVSKVAKYPHIDDYRRAVVEL DEKEYLSLWLVVCEVRNRYSSLHDIVIKNLEKLKKPRSSNTESLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21408-PA | 253 | GF21408-PA | 1..253 | 1..245 | 1157 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17763-PA | 249 | GG17763-PA | 1..249 | 1..245 | 1188 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11898-PA | 251 | GH11898-PA | 1..251 | 1..245 | 1085 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
REG-PB | 245 | CG1591-PB | 1..245 | 1..245 | 1246 | 100 | Plus |
REG-PA | 245 | CG1591-PA | 1..245 | 1..245 | 1246 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15909-PA | 137 | GI15909-PA | 1..137 | 109..245 | 713 | 100 | Plus |
Dmoj\GI15908-PA | 95 | GI15908-PA | 1..66 | 1..66 | 269 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13311-PA | 247 | GL13311-PA | 1..247 | 1..245 | 1094 | 85.4 | Plus |
Dper\GL15090-PA | 263 | GL15090-PA | 15..263 | 5..245 | 853 | 66.3 | Plus |
Dper\GL14290-PA | 202 | GL14290-PA | 11..202 | 12..245 | 367 | 37 | Plus |
Dper\GL16040-PA | 205 | GL16040-PA | 23..200 | 23..234 | 237 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14020-PA | 247 | GA14020-PA | 1..247 | 1..245 | 1094 | 85.4 | Plus |
Dpse\GA25468-PA | 263 | GA25468-PA | 15..263 | 5..245 | 850 | 65.9 | Plus |
Dpse\GA25043-PA | 202 | GA25043-PA | 11..202 | 12..245 | 371 | 37.4 | Plus |
Dpse\GA26112-PA | 205 | GA26112-PA | 23..200 | 23..234 | 228 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11610-PA | 245 | GM11610-PA | 1..245 | 1..245 | 1241 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17109-PA | 245 | GD17109-PA | 1..245 | 1..245 | 1243 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16817-PA | 248 | GJ16817-PA | 1..248 | 1..245 | 1094 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18337-PA | 255 | GK18337-PA | 1..255 | 1..245 | 1103 | 83.9 | Plus |
Dwil\GK22208-PA | 231 | GK22208-PA | 1..231 | 1..245 | 596 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17053-PA | 249 | GE17053-PA | 1..249 | 1..245 | 1184 | 91.6 | Plus |
Translation from 165 to 902
> LD45860.hyp MPNDTVVKVQEYKDSLILKAELLITKGFPENIVRLNELLATPIFNERNFE EVHQDLNIPVLPPLLVKNELEDRDSLPTKRQRVDVIVSGQPVMGLPAGTV PCNKPLCEMIKVVKPIIRKLVEDSNLLKMWISFMIPKIEDGNNFGVSIQE DTLAEIQTVESEAAAFFDQISRYFLSRAKVVSKVAKYPHIDDYRRAVVEL DEKEYLSLWLVVCEVRNRYSSLHDIVIKNLEKLKKPRSSNTESLY*