BDGP Sequence Production Resources |
Search the DGRC for LD45906
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 459 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | temp-RA |
Protein status: | LD45906.pep: gold |
Preliminary Size: | 2253 |
Sequenced Size: | 2194 |
Gene | Date | Evidence |
---|---|---|
CG3073 | 2001-11-29 | Blastp of sequenced clone |
CG3073 | 2003-01-01 | Sim4 clustering to Release 3 |
l(1)G0144 | 2008-04-29 | Release 5.5 accounting |
l(1)G0144 | 2008-08-15 | Release 5.9 accounting |
l(1)G0144 | 2008-12-18 | 5.12 accounting |
2194 bp (2194 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069689
> LD45906.complete CGGTTAGTAGGTTATCGTGGCAAGTGCCTCCTCTGTTGTTGTGCACACCA AACACATGTTTGCAAACAAACATATGCTCACCGTCGCCAAAAAAAGGGAA CACATTTCCGAGCTTGCGGACCGATCCGCCGGAGAACCGCGCTTTGGGGT GAACCAGATTGACAGCCCCTCGCACTGGGCACTGAAATAATAATAATAAT AAAGGCTAGATCTCGTGTCCAGGCCCCGGCTTAATTGAAATTTATTTGTT GTGATGCGGCCGCCTTTGGGGGTTCCATAGTCGCGTAGACAGGGTTCCAG CCTCCGCCATCTTCTCCTCTTCCTCCCCTTTCCAAATCTTAATTAACCGG AGACATTGAGCATGTTCATATTAATTGGAGGCAATCAATGTGCCTGAGAC CCTCGAATCGAACGGAACGGAAGCGAGATCCCCGAGGAAGCAAAAACCAC ATCCCCATTGAAATTCCACGTTCGGACTATACTCAAATTCCATGGAGGAG GAACGCAACGAGAAAAAGGTGCTCTGCGAGAAGATCATCAGGGACATCAA TGCGGTGTTCCTCAAGGATCAGGATCTCGCCTCCTTTGAAATTATACCCA AAGAAGCCAACTGCAACAAATCGCCGGTTGTGCATGTGGAGCACAATCTG GGCCTGGAATCGTGGTGTGCCCAGCATGTCTACGACCACGCCCACCGCAC CCTCATCTCCCATCGCCGTCAAACCACGGCGCAACAGCTGCGGACGCTGC AGCAGCAGCAGCAGAGCGACTCCCTGGCCAAATACCTAAACGTGGCTCTG CTGATTAATCCCGATGTGACCACCTTTTGGCACATCCGCCGTCAGCTGGT GCAAAAGAATCGGCTGAGCATCAACAAGGAGCTGCAGTTCTCCGCACTCG TGCTCTCAATCAAACCGAAGTCCAATGAAGCATTCGCCTACCGCCGTTGG CTGTACTCATTTCAAAGTGCCGATGCTATTGACTGGCCCAATGAGATCGG GATATGCGAAAGGGCCGCCGATAGATGCGCCAGCAACTATCACGCCTGGT CGCACCGCCAGTGGATCCTTCAGAACGGCCCATGCCTGCTGCAATCGGAA CTGCTACGCACGGAGAAGTTTATGCGGAAGCACATCAGTGACTACAGCTG CTACCACTACCGCCAAGTGCTCCTGAGTCGTGCATATGAGCTCAGTTTTG CCCTTCCCAAGGATTCCGGAGCCAGTGGTTCGTCTACGTTGGCCAGTCTG CAGCATCTAATGACAAGCTATGGCCTGGAATGTGAAGCCAACGCTGAGGA TCTGCTGGGTCTCTTGCTACCACATGTGGATCTGAGTTCCGTGAGCAAGC AAAGGCTAATATCATTTCTTTACTGCTGCAACGTTGCCGCCAACGATATG CGTCTGTGTGCCGAGCAGCGCTTGATGTACGGATCGCGGGATTGCTTCGA GCTGCATCGCCGTGCGGCACTCAAGTTCATCGTGGAGCAGTGCGTGCGCC TGCAAATGGGCTTGCCCAATGGCCAACTGTTACCAGTGGCGTCAGGCGAT CTGCGTTCGCATTTGGGCAACTTTGACTTTGAAGATAATCCGTTTTTAAG TGCCGTACGGCGCGAGGAGTCCACCCTGGGTGGTAAGCACCGGCGGTGGT GCAATCTTCACCTCAGCTTTGGATATCCAGCGGACTAGACAGCGCGACCT GATAAAGCTCAAATCAATCTACCCCAATAGAATTACTCACTCCCGGCCTT TCCGTTTGCCCATCCGTTCTGAAATGTGGCAAGTGTATAAAGACGTGTGT TTTATTTCCTATCTAATTATCGTCCCAAAAATACAGAAACTTGTGCAAGA CAAATTGTTAAAGAGTAAAATACTAGAAAGGAAGACGATTCAAAACGGAT TTGGAAACGGAAATGCCTCTATTCTACTCTACTATAAATGTGCGATCCAA AGACAAAGTTCAACTAGCCCGATATGACAACGGATCTCACTGGTCCGCCA ATTGCATTTCGATATCTATTAGCGTTACCTGTTCGTTTCTGTTCTTAATC TGATCCGGGCACGATTTGTTAGCCCTTTGTTCAGAAGTAAAACTTAACCG ATTATCGCCATGCCATGCACGTGTTTGTTGTTAGCCAATTGCAGTTAGTT TTTAAATAAATCCAAATCATAGACGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(1)G0144-RA | 2287 | l(1)G0144-RA | 91..2266 | 1..2176 | 10880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 2154158..2155374 | 2175..959 | 6055 | 99.8 | Minus |
chrX | 22417052 | chrX | 2155902..2156478 | 577..1 | 2840 | 99.5 | Minus |
chrX | 22417052 | chrX | 2155415..2155805 | 968..578 | 1955 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2154158..2155366 | 967..2175 | 100 | <- | Minus |
chrX | 2155417..2155805 | 578..966 | 100 | <- | Minus |
chrX | 2155902..2156478 | 1..577 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..1197 | 492..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..1197 | 492..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..1197 | 492..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..1197 | 492..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
temp-RA | 1..1197 | 492..1688 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..2175 | 1..2175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..2175 | 1..2175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..2163 | 13..2175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(1)G0144-RA | 1..2175 | 1..2175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
temp-RA | 1..2163 | 13..2175 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2260207..2261415 | 967..2175 | 100 | <- | Minus |
X | 2261466..2261854 | 578..966 | 100 | <- | Minus |
X | 2261951..2262527 | 1..577 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2260207..2261415 | 967..2175 | 100 | <- | Minus |
X | 2261466..2261854 | 578..966 | 100 | <- | Minus |
X | 2261951..2262527 | 1..577 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2260207..2261415 | 967..2175 | 100 | <- | Minus |
X | 2261466..2261854 | 578..966 | 100 | <- | Minus |
X | 2261951..2262527 | 1..577 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2154240..2155448 | 967..2175 | 100 | <- | Minus |
arm_X | 2155499..2155887 | 578..966 | 100 | <- | Minus |
arm_X | 2155984..2156560 | 1..577 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2268305..2269513 | 967..2175 | 100 | <- | Minus |
X | 2269564..2269952 | 578..966 | 100 | <- | Minus |
X | 2270049..2270625 | 1..577 | 100 | Minus |
Translation from 491 to 1687
> LD45906.hyp MEEERNEKKVLCEKIIRDINAVFLKDQDLASFEIIPKEANCNKSPVVHVE HNLGLESWCAQHVYDHAHRTLISHRRQTTAQQLRTLQQQQQSDSLAKYLN VALLINPDVTTFWHIRRQLVQKNRLSINKELQFSALVLSIKPKSNEAFAY RRWLYSFQSADAIDWPNEIGICERAADRCASNYHAWSHRQWILQNGPCLL QSELLRTEKFMRKHISDYSCYHYRQVLLSRAYELSFALPKDSGASGSSTL ASLQHLMTSYGLECEANAEDLLGLLLPHVDLSSVSKQRLISFLYCCNVAA NDMRLCAEQRLMYGSRDCFELHRRAALKFIVEQCVRLQMGLPNGQLLPVA SGDLRSHLGNFDFEDNPFLSAVRREESTLGGKHRRWCNLHLSFGYPAD*
Translation from 491 to 1687
> LD45906.pep MEEERNEKKVLCEKIIRDINAVFLKDQDLASFEIIPKEANCNKSPVVHVE HNLGLESWCAQHVYDHAHRTLISHRRQTTAQQLRTLQQQQQSDSLAKYLN VALLINPDVTTFWHIRRQLVQKNRLSINKELQFSALVLSIKPKSNEAFAY RRWLYSFQSADAIDWPNEIGICERAADRCASNYHAWSHRQWILQNGPCLL QSELLRTEKFMRKHISDYSCYHYRQVLLSRAYELSFALPKDSGASGSSTL ASLQHLMTSYGLECEANAEDLLGLLLPHVDLSSVSKQRLISFLYCCNVAA NDMRLCAEQRLMYGSRDCFELHRRAALKFIVEQCVRLQMGLPNGQLLPVA SGDLRSHLGNFDFEDNPFLSAVRREESTLGGKHRRWCNLHLSFGYPAD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21965-PA | 404 | GF21965-PA | 1..404 | 1..398 | 1671 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12630-PA | 398 | GG12630-PA | 1..398 | 1..398 | 1932 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12307-PA | 408 | GH12307-PA | 8..401 | 6..394 | 1488 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
temp-PB | 398 | CG3073-PB | 1..398 | 1..398 | 2104 | 100 | Plus |
temp-PA | 398 | CG3073-PA | 1..398 | 1..398 | 2104 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21449-PA | 409 | GI21449-PA | 1..406 | 1..394 | 1451 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13386-PA | 411 | GL13386-PA | 1..404 | 1..397 | 1564 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15907-PA | 411 | GA15907-PA | 1..404 | 1..397 | 1566 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18897-PA | 398 | GM18897-PA | 1..398 | 1..398 | 2083 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16377-PA | 398 | GD16377-PA | 1..398 | 1..398 | 2091 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16470-PA | 408 | GJ16470-PA | 11..402 | 6..395 | 1508 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25761-PA | 401 | GK25761-PA | 1..396 | 1..396 | 1570 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16959-PA | 396 | GE16959-PA | 1..396 | 1..398 | 1972 | 93 | Plus |