Clone LD46049 Report

Search the DGRC for LD46049

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:460
Well:49
Vector:pOT2
Associated Gene/TranscriptsnRNP-U1-70K-RA
Protein status:LD46049.pep: gold
Preliminary Size:2208
Sequenced Size:1849

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8749 2001-01-01 Release 2 assignment
CG8749 2001-10-10 Blastp of sequenced clone
CG8749 2003-01-01 Sim4 clustering to Release 3
snRNP70K 2008-04-29 Release 5.5 accounting
snRNP70K 2008-08-15 Release 5.9 accounting
snRNP70K 2008-12-18 5.12 accounting

Clone Sequence Records

LD46049.complete Sequence

1849 bp (1849 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061501

> LD46049.complete
GGGGTCACACTTGCTACTCAAGCCAGGCGAAAAACTAAAGAAAATCGGGA
AAATACTTGGTCTGCACCGAATTATATTACTGGTACTTAAACGAAGTACC
CTAGATTTATTCTTGCCAAGCGGATGGCTGTTTAAGACGAGGAACTTCAG
GAAAAGGTAAAACAAAACAAAAAAGCCCACAAAATGACCCAATATCTGCC
GCCGAATCTGCTGGCGCTGTTCGCGGCACGGGAGCCCATCCCGTTCATGC
CGCCGGTGGACAAGCTGCCGCACGAGAAGAAGTCTCGCGGCTACCTGGGA
GTGGCCAAGTTCATGGCCGATTTCGAGGATCCCAAGGACACGCCGCTGCC
GAAAACGGTGGAAACGCGTCAGGAGCGGCTGGAGCGACGCCGGCGCGAGA
AGGCCGAGCAAGTGGCCTACAAGCTGGAGCGTGAGATAGCGCTGTGGGAC
CCCACAGAGATCAAAAATGCCACGGAGGACCCGTTTCGCACGCTGTTCAT
TGCACGCATCAACTACGACACGTCCGAGTCGAAGCTGCGGCGTGAGTTCG
AGTTCTACGGGCCCATCAAGAAGATCGTCCTGATCCACGACCAGGAATCA
GGTAAACCCAAGGGCTACGCCTTCATCGAGTACGAGCACGAGCGGGACAT
GCATGCCGCCTACAAGCACGCCGATGGTAAGAAGATCGACAGCAAGCGCG
TCCTGGTGGACGTGGAGCGGGCTCGCACGGTCAAGGGCTGGCTGCCCCGA
CGCCTGGGCGGCGGTCTGGGTGGAACGCGCCGCGGCGGCAACGATGTCAA
CATTAAGCACTCCGGCCGCGAGGACAACGAGAGGGAACGCGAGCGCTACC
GGCTGGAGCGGGAGCGTGAGGATCGCGAGGGTCCTGGACGCGGCGGCGGC
TCCAATGGCCTGGATGCCCGGCCCGGACGCGGTTTCGGTGCGGAACGTCG
ACGTTCCCGCTCCAGGGAACGCCGCGACCGTGAACGAGATCGCGGACGGG
GCGCTGTGGCTAGCAACGGTCGCTCGCGCAGCCGTTCTCGCGAGCGCAGA
AAACGACGAGCGGGCAGCCGGGAGCGGTACGACGAGTTCGACCGCCGCGA
TCGGCGGGACAGGGAGCGCGAGCGTGATCGCGATCGCGAGCGTGAGAAGA
AAAAGAAGCGCTCCAAGTCTCGCGAACGCGAATCCTCCAGGGAGCGTCGC
GAACGGAAGCGAGAGAGAAGGGATCGAGAACGCGGCACCGGATCCGGCGG
CGATGTCAAGGAGCGCAAGCCCGATTTCCGTGATATGGATGTCATCAAGA
TCAAGGAGGAGCCCGTCGACGATGGCTATCCCACATTTGACTACCAGAAC
GCGACCATCAAGCGTGAGATCGACGATGAGGATGAGGAGAAGTACCGGCC
GCCGCCTGCGCATCACAATATGTTCAGTGTGCCGCCGCCGCCCATTTTGG
GGCGTGGAAATGCCAGCACGAATCCCAATCCCGACAATGGCCAGCAGAGC
TCCGGCGACCCGAGTTGGTGGCGTCAGTAGAGTCATGGAGCGATGTGTCA
AGGTTAATATTTCTAGAAGTCAGACGTCTGTGAGTCGCAACTATTTATTC
ATTCGACTCCGAGGCACCCCAATCCTGGAGAGCCTAACCGTAGCTATCCA
TTTTACACAGAAAATTTTAAGGTACCACTTGGAGGAGGGCCAAGTAGAAC
AAGATTATAGAAAACCCGACCGCTAAACGCAGAATCCGCTAATGTGTGCG
TAGCTTAAATCACTTAAATTTATAAGTAACTCTTAACAAATGAATATGAA
AACAGTAAGTAAAATAAAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA

LD46049.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
snRNP70K.a 2974 snRNP70K.a 34..1855 1..1822 9110 100 Plus
snRNP70K-RA 2186 snRNP70K-RA 149..1970 1..1822 9110 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6968901..6970587 1821..135 8420 99.9 Minus
chr2L 23010047 chr2L 6970665..6970800 136..1 680 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:42:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6969824..6971511 1822..135 8440 100 Minus
2L 23513712 2L 6971589..6971724 136..1 680 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6969824..6971511 1822..135 8440 100 Minus
2L 23513712 2L 6971589..6971724 136..1 680 100 Minus
Blast to na_te.dros performed 2019-03-16 22:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
INE-1 611 INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). 400..446 1806..1762 113 74.5 Minus

LD46049.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:10:32 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6968901..6970585 137..1821 99 <- Minus
chr2L 6970665..6970800 1..136 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:29:32 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP70K-RA 1..1347 184..1530 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:39:10 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP-U1-70K-RA 1..1347 184..1530 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:11:08 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP-U1-70K-RA 1..1347 184..1530 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:07:56 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP70K-RA 1..1347 184..1530 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:35:07 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP-U1-70K-RA 1..1347 184..1530 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:20:24 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP70K-RA 13..1833 1..1821 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:39:09 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP-U1-70K-RA 13..1833 1..1821 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:08 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP-U1-70K-RA 14..1834 1..1821 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:07:59 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP70K-RA 13..1833 1..1821 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:35:07 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
snRNP-U1-70K-RA 14..1834 1..1821 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:10:32 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6969825..6971509 137..1821 100 <- Minus
2L 6971589..6971724 1..136 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:10:32 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6969825..6971509 137..1821 100 <- Minus
2L 6971589..6971724 1..136 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:10:32 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6969825..6971509 137..1821 100 <- Minus
2L 6971589..6971724 1..136 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:08 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6971589..6971724 1..136 100   Minus
arm_2L 6969825..6971509 137..1821 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:44:10 Download gff for LD46049.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6969825..6971509 137..1821 100 <- Minus
2L 6971589..6971724 1..136 100   Minus

LD46049.pep Sequence

Translation from 183 to 1529

> LD46049.pep
MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDP
KDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDP
FRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEY
EHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRR
GGNDVNIKHSGREDNERERERYRLEREREDREGPGRGGGSNGLDARPGRG
FGAERRRSRSRERRDRERDRGRGAVASNGRSRSRSRERRKRRAGSRERYD
EFDRRDRRDRERERDRDREREKKKKRSKSRERESSRERRERKRERRDRER
GTGSGGDVKERKPDFRDMDVIKIKEEPVDDGYPTFDYQNATIKREIDDED
EEKYRPPPAHHNMFSVPPPPILGRGNASTNPNPDNGQQSSGDPSWWRQ*

LD46049.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14460-PA 453 GF14460-PA 1..453 1..448 1349 84.2 Plus
Dana\GF18772-PA 621 GF18772-PA 191..374 44..228 153 30.3 Plus
Dana\GF16912-PA 415 GF16912-PA 15..90 101..176 152 35.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:43:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23559-PA 448 GG23559-PA 1..448 1..448 2248 98.2 Plus
Dere\GG22991-PA 416 GG22991-PA 15..90 101..176 152 35.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13577-PA 465 GH13577-PA 1..465 1..448 1218 71.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:47
Subject Length Description Subject Range Query Range Score Percent Strand
snRNP-U1-70K-PC 448 CG8749-PC 1..448 1..448 2378 100 Plus
snRNP-U1-70K-PA 448 CG8749-PA 1..448 1..448 2378 100 Plus
CG5808-PA 653 CG5808-PA 238..513 100..367 245 28.3 Plus
CG6227-PA 1224 CG6227-PA 3..149 208..350 209 38 Plus
CG2839-PA 826 CG2839-PA 530..697 212..376 203 30.4 Plus
CG2839-PA 826 CG2839-PA 487..696 199..403 200 28.1 Plus
CG2839-PA 826 CG2839-PA 426..721 48..376 191 25.8 Plus
CG7971-PG 1062 CG7971-PG 442..655 213..407 189 28.6 Plus
CG7971-PA 1062 CG7971-PA 442..655 213..407 189 28.6 Plus
CG7971-PC 1107 CG7971-PC 442..655 213..407 189 28.6 Plus
CG7971-PF 1655 CG7971-PF 667..880 213..407 189 28.6 Plus
CG6340-PB 513 CG6340-PB 48..205 199..354 184 30.2 Plus
CG7971-PG 1062 CG7971-PG 457..635 208..363 183 29.6 Plus
CG7971-PA 1062 CG7971-PA 457..635 208..363 183 29.6 Plus
CG7971-PC 1107 CG7971-PC 457..635 208..363 183 29.6 Plus
CG7971-PF 1655 CG7971-PF 682..860 208..363 183 29.6 Plus
x16-PB 257 CG10203-PB 8..244 102..346 181 28.2 Plus
CG2839-PA 826 CG2839-PA 295..461 212..376 180 27.6 Plus
CG2839-PA 826 CG2839-PA 372..563 199..405 180 28.6 Plus
CG7971-PG 1062 CG7971-PG 356..531 206..375 179 30.4 Plus
CG7971-PA 1062 CG7971-PA 356..531 206..375 179 30.4 Plus
CG7971-PC 1107 CG7971-PC 356..531 206..375 179 30.4 Plus
CG7971-PF 1655 CG7971-PF 581..756 206..375 179 30.4 Plus
x16-PA 258 CG10203-PA 8..245 102..346 179 26.9 Plus
SF1-PC 323 CG5836-PC 29..177 196..341 179 30.7 Plus
SF1-PB 347 CG5836-PB 29..177 196..341 179 30.7 Plus
SF1-PA 787 CG5836-PA 29..177 196..341 179 30.7 Plus
CG4119-PB 998 CG4119-PB 318..452 224..350 179 35.6 Plus
CG4119-PA 998 CG4119-PA 318..452 224..350 179 35.6 Plus
CG2839-PA 826 CG2839-PA 286..468 208..405 178 24.6 Plus
CG2839-PA 826 CG2839-PA 465..748 60..380 178 24.9 Plus
CG7971-PG 1062 CG7971-PG 312..483 208..377 178 28.7 Plus
CG7971-PA 1062 CG7971-PA 312..483 208..377 178 28.7 Plus
CG7971-PC 1107 CG7971-PC 312..483 208..377 178 28.7 Plus
CG7971-PF 1655 CG7971-PF 537..708 208..377 178 28.7 Plus
SF1-PC 323 CG5836-PC 27..161 245..352 177 38.2 Plus
SF1-PB 347 CG5836-PB 27..161 245..352 177 38.2 Plus
SF1-PA 787 CG5836-PA 27..161 245..352 177 38.2 Plus
Caper-PB 594 CG11266-PB 53..235 190..367 177 30.3 Plus
Caper-PA 594 CG11266-PA 53..235 190..367 177 30.3 Plus
B52-PB 329 CG10851-PB 177..320 213..363 176 35.4 Plus
CG4119-PB 998 CG4119-PB 346..478 282..405 176 39.3 Plus
CG4119-PA 998 CG4119-PA 346..478 282..405 176 39.3 Plus
CG6686-PB 964 CG6686-PB 50..314 150..419 176 26.2 Plus
CG6686-PA 970 CG6686-PA 108..320 195..419 175 29.4 Plus
B52-PN 350 CG10851-PN 172..314 213..369 174 35 Plus
B52-PC 350 CG10851-PC 172..314 213..369 174 35 Plus
B52-PA 350 CG10851-PA 172..314 213..369 174 35 Plus
B52-PO 355 CG10851-PO 177..319 213..369 174 35 Plus
B52-PM 355 CG10851-PM 177..319 213..369 174 35 Plus
eIF4H1-PC 358 CG4429-PC 25..263 97..350 173 28.2 Plus
eIF4H1-PD 388 CG4429-PD 25..263 97..350 173 28.2 Plus
CG7971-PG 1062 CG7971-PG 343..513 208..369 172 28.1 Plus
CG7971-PA 1062 CG7971-PA 343..513 208..369 172 28.1 Plus
CG7971-PC 1107 CG7971-PC 343..513 208..369 172 28.1 Plus
CG7971-PF 1655 CG7971-PF 568..738 208..369 172 28.1 Plus
CG6686-PA 970 CG6686-PA 59..229 208..405 172 28.1 Plus
Saf-B-PB 928 CG6995-PB 312..676 102..444 172 22.1 Plus
B52-PN 350 CG10851-PN 156..349 148..367 170 29.6 Plus
B52-PC 350 CG10851-PC 156..349 148..367 170 29.6 Plus
B52-PA 350 CG10851-PA 156..349 148..367 170 29.6 Plus
B52-PO 355 CG10851-PO 161..354 148..367 170 29.6 Plus
B52-PM 355 CG10851-PM 161..354 148..367 170 29.6 Plus
CG2839-PA 826 CG2839-PA 285..410 254..376 169 29.4 Plus
Caper-PB 594 CG11266-PB 23..156 233..369 169 34.1 Plus
Caper-PA 594 CG11266-PA 23..156 233..369 169 34.1 Plus
Flacc-PC 842 CG7358-PC 226..398 225..403 168 32.1 Plus
Flacc-PB 1139 CG7358-PB 226..398 225..403 168 32.1 Plus
Flacc-PA 1150 CG7358-PA 226..398 225..403 168 32.1 Plus
CG7971-PG 1062 CG7971-PG 333..524 149..348 167 29.1 Plus
CG7971-PA 1062 CG7971-PA 333..524 149..348 167 29.1 Plus
CG7971-PC 1107 CG7971-PC 333..524 149..348 167 29.1 Plus
CG7971-PF 1655 CG7971-PF 558..749 149..348 167 29.1 Plus
wcy-PC 832 CG8949-PC 64..315 192..395 167 27.9 Plus
wcy-PD 834 CG8949-PD 64..315 192..395 167 27.9 Plus
wcy-PA 834 CG8949-PA 64..315 192..395 167 27.9 Plus
wcy-PE 838 CG8949-PE 64..315 192..395 167 27.9 Plus
wcy-PG 860 CG8949-PG 64..315 192..395 167 27.9 Plus
wcy-PF 876 CG8949-PF 106..357 192..395 167 27.9 Plus
Rbp1-like-PC 158 CG1987-PC 13..157 104..288 166 30.1 Plus
Rbp1-like-PA 158 CG1987-PA 13..157 104..288 166 30.1 Plus
CG9776-PB 685 CG9776-PB 200..397 211..423 166 28.7 Plus
SC35-PD 195 CG5442-PD 20..194 99..261 163 28.4 Plus
SC35-PC 195 CG5442-PC 20..194 99..261 163 28.4 Plus
SC35-PB 195 CG5442-PB 20..194 99..261 163 28.4 Plus
tra2-PE 179 CG10128-PE 12..178 102..296 162 28.6 Plus
tra2-PD 226 CG10128-PD 59..225 102..296 162 28.6 Plus
tra2-PC 226 CG10128-PC 59..225 102..296 162 28.6 Plus
tra2-PF 264 CG10128-PF 97..263 102..296 162 28.6 Plus
tra2-PA 264 CG10128-PA 97..263 102..296 162 28.6 Plus
tra2-PG 264 CG10128-PG 97..263 102..296 162 28.6 Plus
CG2839-PA 826 CG2839-PA 332..497 212..376 161 26.5 Plus
Caper-PB 594 CG11266-PB 25..173 193..366 159 33.7 Plus
Caper-PA 594 CG11266-PA 25..173 193..366 159 33.7 Plus
SF1-PC 323 CG5836-PC 36..133 265..366 156 38.5 Plus
SF1-PB 347 CG5836-PB 36..133 265..366 156 38.5 Plus
SF1-PA 787 CG5836-PA 36..133 265..366 156 38.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24161-PA 452 GI24161-PA 1..250 1..250 956 94.8 Plus
Dmoj\GI24038-PA 577 GI24038-PA 238..422 100..291 165 31.6 Plus
Dmoj\GI23336-PA 428 GI23336-PA 15..90 101..176 152 35.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:43:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25592-PA 309 GL25592-PA 82..309 230..448 393 67 Plus
Dper\GL25592-PA 309 GL25592-PA 1..59 1..59 305 93.2 Plus
Dper\GL24357-PA 418 GL24357-PA 15..90 101..176 153 35.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:43:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21298-PA 457 GA21298-PA 1..457 1..448 1301 82.8 Plus
Dpse\GA20525-PA 418 GA20525-PA 15..90 101..176 154 35.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13669-PA 448 GM13669-PA 1..448 1..448 2271 99.3 Plus
Dsec\GM17877-PA 419 GM17877-PA 15..90 101..176 152 35.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22521-PA 348 GD22521-PA 1..341 1..341 1703 99.7 Plus
Dsim\GD22522-PA 81 GD22522-PA 1..81 368..448 438 97.5 Plus
Dsim\GD19237-PA 419 GD19237-PA 15..90 101..176 152 35.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21434-PA 454 GJ21434-PA 1..250 1..250 969 95.6 Plus
Dvir\GJ10336-PA 427 GJ10336-PA 15..90 101..176 152 35.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18098-PA 470 GK18098-PA 1..211 1..211 934 98.6 Plus
Dwil\GK14167-PA 401 GK14167-PA 2..91 87..176 152 31.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18384-PA 448 GE18384-PA 1..448 1..448 2258 98.7 Plus
Dyak\GE25546-PA 414 GE25546-PA 15..90 101..176 152 35.5 Plus

LD46049.hyp Sequence

Translation from 183 to 1529

> LD46049.hyp
MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDP
KDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDP
FRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEY
EHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRR
GGNDVNIKHSGREDNERERERYRLEREREDREGPGRGGGSNGLDARPGRG
FGAERRRSRSRERRDRERDRGRGAVASNGRSRSRSRERRKRRAGSRERYD
EFDRRDRRDRERERDRDREREKKKKRSKSRERESSRERRERKRERRDRER
GTGSGGDVKERKPDFRDMDVIKIKEEPVDDGYPTFDYQNATIKREIDDED
EEKYRPPPAHHNMFSVPPPPILGRGNASTNPNPDNGQQSSGDPSWWRQ*

LD46049.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
snRNP-U1-70K-PC 448 CG8749-PC 1..448 1..448 2378 100 Plus
snRNP-U1-70K-PA 448 CG8749-PA 1..448 1..448 2378 100 Plus
CG5808-PA 653 CG5808-PA 238..513 100..367 245 28.3 Plus
CG6227-PA 1224 CG6227-PA 3..149 208..350 209 38 Plus
CG2839-PA 826 CG2839-PA 530..697 212..376 203 30.4 Plus