BDGP Sequence Production Resources |
Search the DGRC for LD46084
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 460 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | MED4-RA |
Protein status: | LD46084.pep: gold |
Preliminary Size: | 1135 |
Sequenced Size: | 937 |
Gene | Date | Evidence |
---|---|---|
CG8609 | 2001-01-01 | Release 2 assignment |
CG8609 | 2001-10-10 | Blastp of sequenced clone |
CG8609 | 2003-01-01 | Sim4 clustering to Release 3 |
MED4 | 2008-04-29 | Release 5.5 accounting |
MED4 | 2008-08-15 | Release 5.9 accounting |
MED4 | 2008-12-18 | 5.12 accounting |
937 bp (937 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061502
> LD46084.complete CGGTGTGGAAAATAAACAAATTGCAATTATTGCTTAGCACAAACGATTTG CCGTGATAATGTCGTTTCATTTGAGCACAAAAGAGCGCCTTCTGCTCCTG ATCGACGACATTGAGATGATTGCCAAGGAGTTGATCGAGCAGGCGCACCA GAAGATCTCCAGCACCGAATTGGTGGACCTGTTGGATTTGCTGGTGGCCA AAGATGAGGAATTTCGCAAAATGCTGGAACTGGCGGAGGAGCAGGCGAAA GTGGAGGAGGCGATGGACCAACTGCGCGCTAAGGTCGAGGTGCACGACCG TGAGATCCAGAAGCTGCAAAAGTCGCTAAAGGATGCGGAGCTCATACTGT CCACGGCCATCTTCCAAGCGCGACAGAAACTGGCCAGCATCAATCAGGCC AACAAACGACCGGTTTCATCCGAGGAGCTCATCAAATACGCACATCGGAT TAGCTCCGCCAATGCGGTCAGTGCTCCGCTCACCTGGTGCATAGGTGACC TGCGGCGTCCCTATCCCACGGACATTGAGATGCGCAACGGGCTGCTGGGT AAATCCGAGCAGAACATCAACGGCGGAACAGTGACCCACCAGAACAGCGG CATGCCCTCGGAGCAGCAGCGAACGCTGTCCGGTAGCGCAGGAAGTGGGA GTGGCAGTGGCGCCGGCGGCGAGGTGCCCAATGCCTTCCAGAACCAGTTT AACTGGAATCTCGGAGAGCTGCACATGACCATGGGCGCCTCTGGGAACAC AGTGGCCCTGGAGACGCGCGCCCAGGACGATGTGGAGGTCATGTCCACGG ATAGCTCAAGCTCCAGTTCCAGCGATTCGCAGTAGAATTGGATAAAAAAC TATAACTAAATCTCGTTTAAGCTAGTAGTATTAGGTATTTAATAAAAGCG CGCTGTAAGGAAGTCTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED4-RA | 999 | MED4-RA | 49..965 | 1..917 | 4585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7241684..7242304 | 296..916 | 99 | <- | Minus |
chr3L | 7242363..7242657 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 1..777 | 59..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 1..777 | 59..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 1..777 | 59..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 1..777 | 59..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 1..777 | 59..835 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 22..937 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 22..937 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 26..941 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 22..937 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED4-RA | 26..941 | 1..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7249529..7250149 | 296..916 | 100 | <- | Minus |
3L | 7250208..7250502 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7249529..7250149 | 296..916 | 100 | <- | Minus |
3L | 7250208..7250502 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7249529..7250149 | 296..916 | 100 | <- | Minus |
3L | 7250208..7250502 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7242629..7243249 | 296..916 | 100 | <- | Minus |
arm_3L | 7243308..7243602 | 1..295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7242629..7243249 | 296..916 | 100 | <- | Minus |
3L | 7243308..7243602 | 1..295 | 100 | Minus |
Translation from 58 to 834
> LD46084.pep MSFHLSTKERLLLLIDDIEMIAKELIEQAHQKISSTELVDLLDLLVAKDE EFRKMLELAEEQAKVEEAMDQLRAKVEVHDREIQKLQKSLKDAELILSTA IFQARQKLASINQANKRPVSSEELIKYAHRISSANAVSAPLTWCIGDLRR PYPTDIEMRNGLLGKSEQNINGGTVTHQNSGMPSEQQRTLSGSAGSGSGS GAGGEVPNAFQNQFNWNLGELHMTMGASGNTVALETRAQDDVEVMSTDSS SSSSSDSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23865-PA | 257 | GF23865-PA | 1..244 | 1..245 | 1087 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14986-PA | 258 | GG14986-PA | 1..258 | 1..258 | 1343 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16206-PA | 261 | GH16206-PA | 1..248 | 1..245 | 1118 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED4-PA | 258 | CG8609-PA | 1..258 | 1..258 | 1281 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13352-PA | 261 | GI13352-PA | 1..248 | 1..245 | 1106 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24898-PA | 256 | GL24898-PA | 1..243 | 1..245 | 1111 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21204-PA | 256 | GA21204-PA | 1..243 | 1..245 | 1111 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13780-PA | 258 | GM13780-PA | 1..258 | 1..258 | 1351 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13079-PA | 258 | GD13079-PA | 1..258 | 1..258 | 1351 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13182-PA | 261 | GJ13182-PA | 1..248 | 1..245 | 1098 | 88.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13126-PA | 267 | GK13126-PA | 1..254 | 1..245 | 1029 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20432-PA | 258 | GE20432-PA | 1..258 | 1..258 | 1347 | 99.2 | Plus |
Translation from 58 to 834
> LD46084.hyp MSFHLSTKERLLLLIDDIEMIAKELIEQAHQKISSTELVDLLDLLVAKDE EFRKMLELAEEQAKVEEAMDQLRAKVEVHDREIQKLQKSLKDAELILSTA IFQARQKLASINQANKRPVSSEELIKYAHRISSANAVSAPLTWCIGDLRR PYPTDIEMRNGLLGKSEQNINGGTVTHQNSGMPSEQQRTLSGSAGSGSGS GAGGEVPNAFQNQFNWNLGELHMTMGASGNTVALETRAQDDVEVMSTDSS SSSSSDSQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED4-PA | 258 | CG8609-PA | 1..258 | 1..258 | 1281 | 100 | Plus |