Clone LD46175 Report

Search the DGRC for LD46175

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:461
Well:75
Vector:pOT2
Associated Gene/Transcriptsea-RA
Protein status:LD46175.pep: gold
Preliminary Size:1408
Sequenced Size:1355

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6782 2001-01-01 Release 2 assignment
CG31305 2001-10-10 Blastp of sequenced clone
CG6782 2008-04-29 Release 5.5 accounting
CG6782 2008-08-15 Release 5.9 accounting
CG6783 2008-08-15 Release 5.9 accounting
CG6782 2008-12-18 5.12 accounting
CG6783 2008-12-18 5.12 accounting

Clone Sequence Records

LD46175.complete Sequence

1355 bp (1355 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061503

> LD46175.complete
CTGTCCCCATCGCCACTTCACTTCACCGCTGCCTGGGCTTTCCAAAATTA
TAATTATTTCGGTTTTTTGAATTCTAATCTAATTCCCCACCTAACACCCA
GTCAGCATGGATCGCTCCGCCTTCGCGTCCCTTGTCAGCCCGTACCGCCG
ACGTCCGTGGATGACGGAGCACGGAGCGGCGGCTGCGGACAGCGGCCAGG
TGGGCCTTAAGGGCATCGTCGCCGGCGGTATTACGGGCGGCATCGAGATC
TGCATCACCTATCCCACCGAGTATGTGAAGACACAACTGCAGCTGGACGA
GAAGGGAGCGGCGAAGAAGTACAACGGCATCTTTGATTGCGTTAAGAAGA
CGGTGGGAGAACGTGGATTCCTGGGTCTCTACCGAGGTCTCAGTGTGCTC
GTCTACGGCAGCATTCCTAAGTCAGCGGCGAGATTCGGTGCTTTTGAATT
CCTGAAATCGAACGCCGTGGACTCCCGAGGACAACTGAGCAACTCCGGAA
AGTTGCTTTGCGGCTTAGGAGCTGGCGTATGTGAGGCCATCGTGGCAGTG
ACCCCGATGGAGACCATCAAGGTGAAGTTCATCAACGATCAGCGCAGCGG
CAATCCCAAGTTCAGGGGATTCGCCCACGGCGTTGGCCAAATCATCAAGT
CGGAGGGCATCTCTGGTATCTACAAGGGCCTAACGCCCACCATTCTGAAA
CAGGGCTCCAACCAGGCCATTCGCTTCTTCGTACTGGAGTCCCTTAAGGA
TTTGTACAAGGGTGACGATCACACGAAGCCAGTGCCCAAGTTGGTGGTTG
GAGTGTTTGGAGCTATCGCCGGAGCAGCCTCTGTGTTCGGTAATACGCCG
CTGGATGTGGTCAAGACGAGGATGCAGGGTCTGGAAGCATCGAAATACAA
GAACACTGCCCACTGTGCGGTGGAGATCTTGAAGAACGAAGGTCCCGCCG
CCTTCTACAAGGGCACCGTGCCAAGATTAGGTCGTGTGTGCCTGGATGTG
GCCATCACCTTTATGATCTACGACTCCTTCATGGATCTGTTCAACAAGGT
GTGGGTGTAACTCGGCGATTCGGCTTGGCGACTTAGTTACTTAGTTCATC
CTTCTACCCCAAAAAACCCACTCGTGCATTTTCCTCTGTTCCCATTGTTC
CCTAGTCGACTGTTGCAATAGTTTCTAGTTTTGTGACATATTCCAAGAAA
GCATTTTATATACACTCTATACCCGCAATGGGTAAGTGGCTATAGAAATT
ATACAGCTTGTTTTAAAAATTGAATTAAATCTGAAGAGTCTATTTGAAGT
TCCCATATAAATCATAGCTAGACTGGATGAAAAAAAAAAAAAAAAAAAAA
AAAAA

LD46175.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6782-RC 1352 CG6782-RC 18..1349 1..1332 6660 100 Plus
CG6782-RE 1447 CG6782-RE 190..1444 78..1332 6275 100 Plus
CG6783-RC 1661 CG6783-RC 405..1658 79..1332 6270 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7385384..7386282 1329..431 4495 100 Minus
chr3R 27901430 chr3R 7386340..7386693 432..79 1755 99.7 Minus
chr3R 27901430 chr3R 7387689..7387766 78..1 390 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:42:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11559893..11560794 1332..431 4510 100 Minus
3R 32079331 3R 11560852..11561205 432..79 1770 100 Minus
3R 32079331 3R 11562201..11562278 78..1 390 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 11300724..11301625 1332..431 4510 100 Minus
3R 31820162 3R 11301683..11302036 432..79 1770 100 Minus
3R 31820162 3R 11303032..11303109 78..1 390 100 Minus
Blast to na_te.dros performed on 2019-03-16 02:42:10 has no hits.

LD46175.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:43:17 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7387689..7387766 1..78 100   Minus
chr3R 7386340..7386693 79..432 99 <- Minus
chr3R 7385384..7386280 433..1329 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:29:40 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
CG6782-RD 1..954 107..1060 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:39:15 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
sea-RD 1..954 107..1060 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:39:10 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
sea-RC 1..954 107..1060 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:08:03 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
CG6782-RD 1..954 107..1060 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:17:27 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
sea-RC 1..954 107..1060 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:20:29 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
CG6782-RC 18..1346 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:39:15 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
sea-RC 18..1346 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:39:10 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
sea-RC 18..1346 1..1329 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:08:03 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
CG6782-RC 18..1346 1..1329 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:17:27 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
sea-RC 19..1347 1..1329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:43:17 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11559896..11560792 433..1329 100 <- Minus
3R 11560852..11561205 79..432 100 <- Minus
3R 11562201..11562278 1..78 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:43:17 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11559896..11560792 433..1329 100 <- Minus
3R 11560852..11561205 79..432 100 <- Minus
3R 11562201..11562278 1..78 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:43:17 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11559896..11560792 433..1329 100 <- Minus
3R 11560852..11561205 79..432 100 <- Minus
3R 11562201..11562278 1..78 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:39:10 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7385618..7386514 433..1329 100 <- Minus
arm_3R 7386574..7386927 79..432 100 <- Minus
arm_3R 7387923..7388000 1..78 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:44:15 Download gff for LD46175.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11300727..11301623 433..1329 100 <- Minus
3R 11301683..11302036 79..432 100 <- Minus
3R 11303032..11303109 1..78 100   Minus

LD46175.pep Sequence

Translation from 106 to 1059

> LD46175.pep
MDRSAFASLVSPYRRRPWMTEHGAAAADSGQVGLKGIVAGGITGGIEICI
TYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVY
GSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTP
METIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQG
SNQAIRFFVLESLKDLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLD
VVKTRMQGLEASKYKNTAHCAVEILKNEGPAAFYKGTVPRLGRVCLDVAI
TFMIYDSFMDLFNKVWV*

LD46175.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16639-PA 311 GF16639-PA 1..311 1..317 1357 83.9 Plus
Dana\GF23336-PA 693 GF23336-PA 349..620 40..312 297 28.5 Plus
Dana\GF23042-PA 317 GF23042-PA 32..289 48..291 283 29.7 Plus
Dana\GF15765-PA 359 GF15765-PA 5..273 38..313 273 32.6 Plus
Dana\GF21179-PA 331 GF21179-PA 43..320 37..306 272 31.8 Plus
Dana\GF15765-PA 359 GF15765-PA 98..279 39..224 159 27.9 Plus
Dana\GF23336-PA 693 GF23336-PA 445..623 37..220 155 27.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17216-PA 317 GG17216-PA 1..317 1..317 1623 96.8 Plus
Dere\GG11935-PA 682 GG11935-PA 336..607 40..312 295 28.5 Plus
Dere\GG12807-PA 306 GG12807-PA 18..299 37..310 288 31.4 Plus
Dere\GG18542-PA 321 GG18542-PA 36..293 48..291 287 30.1 Plus
Dere\GG10106-PA 399 GG10106-PA 16..313 12..313 270 31.8 Plus
Dere\GG11935-PA 682 GG11935-PA 432..610 37..220 154 27.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15324-PA 314 GH15324-PA 1..312 1..316 1382 83.9 Plus
Dgri\GH23534-PA 315 GH23534-PA 18..298 34..305 297 30.7 Plus
Dgri\GH23533-PA 324 GH23533-PA 39..296 48..291 292 30.9 Plus
Dgri\GH13280-PA 297 GH13280-PA 3..295 23..312 290 28.8 Plus
Dgri\GH17661-PA 308 GH17661-PA 12..297 28..306 281 31.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
sea-PE 317 CG6782-PE 1..317 1..317 1637 100 Plus
sea-PD 317 CG6782-PD 1..317 1..317 1637 100 Plus
sea-PC 317 CG6782-PC 1..317 1..317 1637 100 Plus
sea-PA 317 CG6782-PA 1..317 1..317 1637 100 Plus
GC1-PB 321 CG18347-PB 22..293 34..291 312 30.8 Plus
GC1-PA 321 CG18347-PA 22..293 34..291 312 30.8 Plus
aralar1-PB 679 CG2139-PB 333..604 40..312 301 28.8 Plus
aralar1-PD 682 CG2139-PD 336..607 40..312 301 28.8 Plus
aralar1-PA 682 CG2139-PA 336..607 40..312 301 28.8 Plus
aralar1-PF 694 CG2139-PF 336..607 40..312 301 28.8 Plus
aralar1-PC 695 CG2139-PC 349..620 40..312 301 28.8 Plus
aralar1-PE 707 CG2139-PE 361..632 40..312 301 28.8 Plus
GC2-PB 319 CG12201-PB 24..288 37..291 291 31.1 Plus
CG5254-PA 306 CG5254-PA 18..299 37..310 290 31 Plus
CG4995-PD 360 CG4995-PD 6..274 38..313 267 32.9 Plus
CG4995-PC 360 CG4995-PC 6..274 38..313 267 32.9 Plus
CG4995-PB 399 CG4995-PB 45..313 38..313 267 32.9 Plus
CG4995-PA 399 CG4995-PA 45..313 38..313 267 32.9 Plus
colt-PD 306 CG3057-PD 16..302 34..315 263 27.2 Plus
colt-PA 306 CG3057-PA 16..302 34..315 263 27.2 Plus
CG7514-PA 301 CG7514-PA 17..291 38..315 250 24.9 Plus
Dic3-PA 287 CG11196-PA 15..274 40..306 248 28.8 Plus
MME1-PA 299 CG3476-PA 15..296 34..311 247 27.5 Plus
Ant2-PC 307 CG1683-PC 19..307 34..312 241 29.8 Plus
Ant2-PB 307 CG1683-PB 19..307 34..312 241 29.8 Plus
Ant2-PA 307 CG1683-PA 19..307 34..312 241 29.8 Plus
CG8026-PD 322 CG8026-PD 26..301 37..307 241 26.2 Plus
CG8026-PB 304 CG8026-PB 26..300 37..306 232 25.5 Plus
CG32103-PD 350 CG32103-PD 48..339 31..306 232 27.2 Plus
CG32103-PC 363 CG32103-PC 61..352 31..306 232 27.2 Plus
CG32103-PE 583 CG32103-PE 281..572 31..306 232 27.2 Plus
CG32103-PB 583 CG32103-PB 281..572 31..306 232 27.2 Plus
CG8026-PD 322 CG8026-PD 26..211 133..314 225 29.3 Plus
CG8026-PB 304 CG8026-PB 26..211 133..314 225 29.3 Plus
Bmcp-PB 303 CG7314-PB 11..298 38..306 224 27.5 Plus
Bmcp-PA 303 CG7314-PA 11..298 38..306 224 27.5 Plus
CG1907-PA 317 CG1907-PA 24..306 40..314 223 23.5 Plus
CG1628-PC 305 CG1628-PC 15..295 33..306 220 27.1 Plus
CG18418-PA 311 CG18418-PA 19..299 38..314 220 24 Plus
CG1628-PB 459 CG1628-PB 169..449 33..306 220 27.1 Plus
sesB-PD 312 CG16944-PD 8..294 19..293 217 27.7 Plus
sesB-PC 312 CG16944-PC 8..294 19..293 217 27.7 Plus
sesB-PE 299 CG16944-PE 11..281 34..293 214 27.9 Plus
sesB-PB 299 CG16944-PB 11..281 34..293 214 27.9 Plus
sesB-PA 299 CG16944-PA 11..281 34..293 214 27.9 Plus
Tpc2-PB 323 CG2857-PB 8..302 32..308 206 25.8 Plus
Mpcp2-PC 356 CG4994-PC 66..331 33..306 203 26.3 Plus
Mpcp2-PB 356 CG4994-PB 66..331 33..306 203 26.3 Plus
Mpcp2-PA 356 CG4994-PA 66..331 33..306 203 26.3 Plus
Tpc1-PA 332 CG6608-PA 29..325 34..306 197 27.5 Plus
Tpc1-PB 332 CG6608-PB 29..325 34..306 197 27.5 Plus
Ucp4A-PB 340 CG6492-PB 49..312 42..289 196 25.1 Plus
CG5254-PB 237 CG5254-PB 6..230 87..310 195 30 Plus
CG1907-PA 317 CG1907-PA 16..205 128..312 172 27.1 Plus
sesB-PD 312 CG16944-PD 132..309 37..214 171 24.7 Plus
sesB-PC 312 CG16944-PC 132..309 37..214 171 24.7 Plus
sesB-PE 299 CG16944-PE 119..296 37..214 171 24.7 Plus
sesB-PB 299 CG16944-PB 119..296 37..214 171 24.7 Plus
sesB-PA 299 CG16944-PA 119..296 37..214 171 24.7 Plus
GC2-PB 319 CG12201-PB 110..283 26..191 168 29.2 Plus
Tpc1-PA 332 CG6608-PA 33..221 137..310 164 27.5 Plus
Tpc1-PB 332 CG6608-PB 33..221 137..310 164 27.5 Plus
Tpc1-PA 332 CG6608-PA 139..330 34..216 163 27.2 Plus
Tpc1-PB 332 CG6608-PB 139..330 34..216 163 27.2 Plus
aralar1-PB 679 CG2139-PB 429..607 37..220 158 27.7 Plus
aralar1-PD 682 CG2139-PD 432..610 37..220 158 27.7 Plus
aralar1-PA 682 CG2139-PA 432..610 37..220 158 27.7 Plus
aralar1-PF 694 CG2139-PF 432..610 37..220 158 27.7 Plus
aralar1-PC 695 CG2139-PC 445..623 37..220 158 27.7 Plus
aralar1-PE 707 CG2139-PE 457..635 37..220 158 27.7 Plus
Tpc2-PB 323 CG2857-PB 116..306 38..217 158 25 Plus
CG32103-PD 350 CG32103-PD 57..224 137..307 155 26.4 Plus
CG32103-PC 363 CG32103-PC 70..237 137..307 155 26.4 Plus
CG32103-PE 583 CG32103-PE 290..457 137..307 155 26.4 Plus
CG32103-PB 583 CG32103-PB 290..457 137..307 155 26.4 Plus
Bmcp-PB 303 CG7314-PB 92..301 13..214 151 22.5 Plus
Bmcp-PA 303 CG7314-PA 92..301 13..214 151 22.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22454-PA 319 GI22454-PA 1..317 1..316 1349 84.5 Plus
Dmoj\GI21513-PA 310 GI21513-PA 21..299 37..306 306 31.9 Plus
Dmoj\GI22760-PA 695 GI22760-PA 352..620 40..312 293 30.4 Plus
Dmoj\GI17471-PA 296 GI17471-PA 13..295 34..313 291 29.8 Plus
Dmoj\GI23551-PA 327 GI23551-PA 42..299 48..291 277 29.7 Plus
Dmoj\GI22760-PA 695 GI22760-PA 445..637 37..225 156 27.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:43:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12264-PA 317 GL12264-PA 1..316 1..316 1395 85.4 Plus
Dper\GL23888-PA 301 GL23888-PA 10..300 26..316 1138 72.9 Plus
Dper\GL22256-PA 321 GL22256-PA 22..293 34..291 305 30.4 Plus
Dper\GL21377-PA 310 GL21377-PA 1..299 19..306 286 30 Plus
Dper\GL22257-PA 312 GL22257-PA 27..284 48..291 282 29.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26244-PA 317 GA26244-PA 1..316 1..316 1395 85.4 Plus
Dpse\GA27089-PA 303 GA27089-PA 12..302 26..316 1142 73.9 Plus
Dpse\GA14898-PA 321 GA14898-PA 22..293 34..291 305 30.4 Plus
Dpse\GA15263-PA 689 GA15263-PA 349..620 40..312 288 29.4 Plus
Dpse\GA18765-PA 310 GA18765-PA 1..299 19..306 284 29.5 Plus
Dpse\GA15263-PA 689 GA15263-PA 445..623 37..220 156 27.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26094-PA 317 GM26094-PA 1..317 1..317 1648 98.4 Plus
Dsec\GM12154-PA 682 GM12154-PA 336..607 40..312 302 29.2 Plus
Dsec\GM23990-PA 321 GM23990-PA 36..293 48..291 287 30.1 Plus
Dsec\GM19087-PA 306 GM19087-PA 18..299 37..310 284 31 Plus
Dsec\GM23991-PA 325 GM23991-PA 30..308 37..305 284 29.9 Plus
Dsec\GM23991-PA 325 GM23991-PA 116..289 26..191 155 28.7 Plus
Dsec\GM12154-PA 682 GM12154-PA 432..610 37..220 154 27.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20656-PA 317 GD20656-PA 1..317 1..317 1645 98.1 Plus
Dsim\GD18793-PA 321 GD18793-PA 36..293 48..291 287 30.1 Plus
Dsim\GD16525-PA 306 GD16525-PA 18..299 37..310 284 31 Plus
Dsim\GD23676-PA 399 GD23676-PA 16..313 12..313 269 31.1 Plus
Dsim\GD13239-PA 301 GD13239-PA 17..291 38..315 256 24.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10052-PA 319 GJ10052-PA 1..317 1..316 1316 82.6 Plus
Dvir\GJ14525-PA 296 GJ14525-PA 3..295 24..313 300 29.8 Plus
Dvir\GJ19052-PA 311 GJ19052-PA 21..304 37..310 300 32.1 Plus
Dvir\GJ22761-PA 695 GJ22761-PA 352..620 40..312 296 30 Plus
Dvir\GJ23511-PA 326 GJ23511-PA 41..298 48..291 290 30.9 Plus
Dvir\GJ22761-PA 695 GJ22761-PA 445..637 37..225 152 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11788-PA 317 GK11788-PA 1..316 1..316 1388 85.8 Plus
Dwil\GK11377-PA 296 GK11377-PA 2..288 27..316 982 64.1 Plus
Dwil\GK13128-PA 679 GK13128-PA 336..607 40..312 292 29.2 Plus
Dwil\GK11426-PA 324 GK11426-PA 39..296 48..291 280 29.7 Plus
Dwil\GK16434-PA 305 GK16434-PA 19..294 37..306 273 30.1 Plus
Dwil\GK13128-PA 679 GK13128-PA 432..610 37..220 152 27 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10110-PA 317 GE10110-PA 1..317 1..317 1540 96.2 Plus
Dyak\GE10109-PA 317 GE10109-PA 1..317 1..317 1452 90.2 Plus
Dyak\GE23386-PA 682 GE23386-PA 336..607 40..312 298 28.8 Plus
Dyak\GE16633-PA 306 GE16633-PA 18..299 37..310 288 31.4 Plus
Dyak\GE26151-PA 321 GE26151-PA 36..293 48..291 287 30.1 Plus
Dyak\GE23386-PA 682 GE23386-PA 432..610 37..220 155 27.2 Plus

LD46175.hyp Sequence

Translation from 106 to 1059

> LD46175.hyp
MDRSAFASLVSPYRRRPWMTEHGAAAADSGQVGLKGIVAGGITGGIEICI
TYPTEYVKTQLQLDEKGAAKKYNGIFDCVKKTVGERGFLGLYRGLSVLVY
GSIPKSAARFGAFEFLKSNAVDSRGQLSNSGKLLCGLGAGVCEAIVAVTP
METIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPTILKQG
SNQAIRFFVLESLKDLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLD
VVKTRMQGLEASKYKNTAHCAVEILKNEGPAAFYKGTVPRLGRVCLDVAI
TFMIYDSFMDLFNKVWV*

LD46175.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:03:23
Subject Length Description Subject Range Query Range Score Percent Strand
sea-PE 317 CG6782-PE 1..317 1..317 1637 100 Plus
sea-PD 317 CG6782-PD 1..317 1..317 1637 100 Plus
sea-PC 317 CG6782-PC 1..317 1..317 1637 100 Plus
sea-PA 317 CG6782-PA 1..317 1..317 1637 100 Plus
GC1-PB 321 CG18347-PB 22..293 34..291 312 30.8 Plus