BDGP Sequence Production Resources |
Search the DGRC for LD46272
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 462 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4617-RA |
Protein status: | LD46272.pep: gold |
Preliminary Size: | 1829 |
Sequenced Size: | 1689 |
Gene | Date | Evidence |
---|---|---|
CG4617 | 2001-01-01 | Release 2 assignment |
CG4617 | 2001-07-04 | Blastp of sequenced clone |
CG4617 | 2008-04-29 | Release 5.5 accounting |
CG4617 | 2008-08-15 | Release 5.9 accounting |
CG4617 | 2008-12-18 | 5.12 accounting |
1689 bp (1689 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051996
> LD46272.complete TTTTGTTTGCTTCGTTTAATTCGTTCTTTTTGCAACAAATTGCATCCCAA TCTTCCAAAGCAGGTATCCAAACATGGAGTCCCCAACCTCGCACCTGGTG GCCAAGGATTTCCAGGTGACGGGTGTTTCGCGCAGCGGACGCGTACGCAA AAAATCGTCGAAATTGTTGGATTTTGAATCTCCGGATGAGATCGAGAAGC GCACAAGGCGTCACAGTGGCGCCAGACAGCCAGCCAGATATTCGGGCCGC GGCAGGCCATCGAATGCGCTGCGTGATCTGGATCTTGACCAGGAGATGCT CGTGGATGATGGCATTATCTCGGATAGCGAGGAATTCCATCCGGATACAA CGGCAACGGTCGTGGCCATTCTGAATTCCGACGATGAACTGGACAATCTG GTGCAGGATATCGTCGATGGTGTCCAGGCGGAGGCCACCAGCCAAGAGTC ATCCGTCCGTCAGAGTCTTTACATGCGCGAGAAGTCCAACAAGCGGCAGG TGCTCAAGGACGGCAAGGTGGTGAGTGCCAAGGTGCAGCGCAAGGACAAG GGCAAGCAGCGCTACACCGCCTACAGTCTGTGGGCCAAGGAGGCGCGACA GAAGGATCTCCAGGATCTAGACTTCACCAGCGCGACCAGACGCCTCAGCG AGCTGTGGGCGAACGTTTCCAATCGGGACAAGAACACCTGGCGGCGCAAG GCCAAAATCGAGGCGTCCAGGGCCAAAACTCGCGACAAAACCGCTGCAAA CGGTGCAACCCAGCCGGCGAGCAACGGCAGCACGGCTCTGGCAGATGCCA CGCAGCACGAGACGATCTTTCAGAACCGTGCGACAACAAGTCGCACTCGA AAACTGGCCGCCGATCGGCAGCAATCCTCAATAGAAGCGGCTGCCGCAGC GGCGGCAGCAGCAGCGACTGGCACCAACACACAGCGGCGCAGCATCAGCA CACGAAGTGCCAGGTCGCAGGTCTCGAAGAGCGCGACGAAACAAGCGCAA GTGCACACGGATGCGGACGTCAGCGGCCGGACTGGGGGTCAGCTGAAGCA GGAGGAGGTGCAAAAGACCAGCATCGAAGTGATCGATGCGGCCGCACATC TGAAGCTGCTCGGCGAGAGCCTGACTGTGATTGGCGAGCGACTGAAGAAG CACAATGGATACGTGGCGCTATCGGGCAGCTTGTCCGTGCTCCTCGACAG CCTGCTCTGCGCCATGGGACCGCTGCTCTGCATGACCACGCAAATACCCG GCATGGAGAACAATGTGCAGTTGAGCAAAAATCTGGCCGACACGCTCGAC AACATCGCCTACGTAATGCCCGGACTATGAAGTAAATTCCGGATTGCAAC TGCAAATGCATACATATATATATATATATAATCATACCAGGCCGCTGCGC TTCCAGCGGCGACTAGAGTCGCCATCGGGATCTGTATGTTTGTAAGGAGT TGGCCAACCTGGAAATAGTTAATCGCATTAGATATGCCTAGTTGATAAAC TGAAGCATCTAGATCCACAAATCATCGAAACATTGGTAGAATTAGGCAAC ATTAAATATCCTATAATCCTTAAGTGAAATAAATGTGAATCACAAGATTC TTATTTCAGCTTCAAATTAAGCAGGCACTTTTTATAATAAACGTAATAAA TAAAGATAAATATAAAAGCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6994819..6995715 | 1515..619 | 4470 | 99.9 | Minus |
chrX | 22417052 | chrX | 6995780..6996293 | 620..107 | 2570 | 100 | Minus |
chrX | 22417052 | chrX | 6994536..6994690 | 1670..1516 | 760 | 99.4 | Minus |
chrX | 22417052 | chrX | 6996349..6996455 | 107..1 | 535 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7102835..7103731 | 1515..619 | 4485 | 100 | Minus |
X | 23542271 | X | 7103792..7104305 | 620..107 | 2570 | 100 | Minus |
X | 23542271 | X | 7102550..7102709 | 1675..1516 | 800 | 100 | Minus |
X | 23542271 | X | 7104361..7104467 | 107..1 | 535 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7110933..7111829 | 1515..619 | 4485 | 100 | Minus |
X | 23527363 | X | 7111890..7112403 | 620..107 | 2570 | 100 | Minus |
X | 23527363 | X | 7110648..7110807 | 1675..1516 | 800 | 100 | Minus |
X | 23527363 | X | 7112459..7112565 | 107..1 | 535 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6994536..6994690 | 1516..1670 | 99 | <- | Minus |
chrX | 6994819..6995383 | 951..1515 | 100 | == | Minus |
chrX | 6995456..6995713 | 621..878 | 99 | <- | Minus |
chrX | 6995780..6996292 | 108..620 | 100 | <- | Minus |
chrX | 6996349..6996455 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 1..1257 | 74..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 1..1257 | 74..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 1..1257 | 74..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 1..1257 | 74..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 1..1257 | 74..1330 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 32..1701 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 32..1701 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 25..1694 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 32..1701 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4617-RA | 25..1694 | 1..1670 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7102555..7102709 | 1516..1670 | 100 | <- | Minus |
X | 7102835..7103729 | 621..1515 | 100 | <- | Minus |
X | 7103792..7104304 | 108..620 | 100 | <- | Minus |
X | 7104361..7104467 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7102555..7102709 | 1516..1670 | 100 | <- | Minus |
X | 7102835..7103729 | 621..1515 | 100 | <- | Minus |
X | 7103792..7104304 | 108..620 | 100 | <- | Minus |
X | 7104361..7104467 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7102555..7102709 | 1516..1670 | 100 | <- | Minus |
X | 7102835..7103729 | 621..1515 | 100 | <- | Minus |
X | 7103792..7104304 | 108..620 | 100 | <- | Minus |
X | 7104361..7104467 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6996588..6996742 | 1516..1670 | 100 | <- | Minus |
arm_X | 6996868..6997762 | 621..1515 | 100 | <- | Minus |
arm_X | 6997825..6998337 | 108..620 | 100 | <- | Minus |
arm_X | 6998394..6998500 | 1..107 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7110653..7110807 | 1516..1670 | 100 | <- | Minus |
X | 7110933..7111827 | 621..1515 | 100 | <- | Minus |
X | 7111890..7112402 | 108..620 | 100 | <- | Minus |
X | 7112459..7112565 | 1..107 | 100 | Minus |
Translation from 73 to 1329
> LD46272.pep MESPTSHLVAKDFQVTGVSRSGRVRKKSSKLLDFESPDEIEKRTRRHSGA RQPARYSGRGRPSNALRDLDLDQEMLVDDGIISDSEEFHPDTTATVVAIL NSDDELDNLVQDIVDGVQAEATSQESSVRQSLYMREKSNKRQVLKDGKVV SAKVQRKDKGKQRYTAYSLWAKEARQKDLQDLDFTSATRRLSELWANVSN RDKNTWRRKAKIEASRAKTRDKTAANGATQPASNGSTALADATQHETIFQ NRATTSRTRKLAADRQQSSIEAAAAAAAAAATGTNTQRRSISTRSARSQV SKSATKQAQVHTDADVSGRTGGQLKQEEVQKTSIEVIDAAAHLKLLGESL TVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQIPGMENNVQL SKNLADTLDNIAYVMPGL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20942-PA | 406 | GF20942-PA | 1..406 | 1..418 | 1280 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17635-PA | 415 | GG17635-PA | 1..415 | 1..418 | 1816 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24353-PA | 469 | GH24353-PA | 1..469 | 1..418 | 1026 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4617-PC | 418 | CG4617-PC | 1..418 | 1..418 | 2072 | 100 | Plus |
CG4617-PA | 418 | CG4617-PA | 1..418 | 1..418 | 2072 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11048-PA | 423 | GI11048-PA | 1..423 | 1..418 | 1076 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14638-PA | 429 | GL14638-PA | 1..429 | 1..418 | 1193 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18305-PA | 431 | GA18305-PA | 1..431 | 1..418 | 1192 | 60.3 | Plus |
Dpse\GA28694-PA | 528 | GA28694-PA | 1..130 | 1..134 | 315 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17478-PA | 414 | GM17478-PA | 1..414 | 1..418 | 1952 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16162-PA | 418 | GD16162-PA | 1..418 | 1..418 | 1984 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14806-PA | 428 | GJ14806-PA | 1..428 | 1..418 | 1085 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16379-PA | 473 | GK16379-PA | 14..473 | 9..418 | 1116 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17541-PA | 417 | GE17541-PA | 1..417 | 1..418 | 1830 | 89 | Plus |
Translation from 73 to 1329
> LD46272.hyp MESPTSHLVAKDFQVTGVSRSGRVRKKSSKLLDFESPDEIEKRTRRHSGA RQPARYSGRGRPSNALRDLDLDQEMLVDDGIISDSEEFHPDTTATVVAIL NSDDELDNLVQDIVDGVQAEATSQESSVRQSLYMREKSNKRQVLKDGKVV SAKVQRKDKGKQRYTAYSLWAKEARQKDLQDLDFTSATRRLSELWANVSN RDKNTWRRKAKIEASRAKTRDKTAANGATQPASNGSTALADATQHETIFQ NRATTSRTRKLAADRQQSSIEAAAAAAAAAATGTNTQRRSISTRSARSQV SKSATKQAQVHTDADVSGRTGGQLKQEEVQKTSIEVIDAAAHLKLLGESL TVIGERLKKHNGYVALSGSLSVLLDSLLCAMGPLLCMTTQIPGMENNVQL SKNLADTLDNIAYVMPGL*