BDGP Sequence Production Resources |
Search the DGRC for LD46305
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 463 |
Well: | 5 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4949-RA |
Protein status: | LD46305.pep: gold |
Preliminary Size: | 1984 |
Sequenced Size: | 1996 |
Gene | Date | Evidence |
---|---|---|
CG4949 | 2001-01-01 | Release 2 assignment |
CG4949 | 2001-10-10 | Blastp of sequenced clone |
CG4949 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4949 | 2008-04-29 | Release 5.5 accounting |
CG4949 | 2008-08-15 | Release 5.9 accounting |
CG4949 | 2008-12-18 | 5.12 accounting |
1996 bp (1996 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061506
> LD46305.complete CGGCAGAAGAATTTTAGAATTCCTTAAATATATATTGTTTAATTTGTAAG CATTTTTAAGGAATGAGTTTGAGCGACTGCAACAATAACTATATATATTT GACGGGCAGTGAGGATTACGCCCTTAATTTGGCAAAGCTATGCGAACGCT TTGCCACCAAAGAAAAGCGCGTCTTACTGATCACCAGTCGCCAGCAGGGA ATGGCAAAGCGCTATCCATGGGAGGCCCATAACTGCAGCAAATACCTGAC CATTCTGCAACTGGTGGATGTGGAGAGCACCCCGCTTCGCATGCTGGAAA TGCAGGATAGCGCCGAATCCTTGCGCAGTCCCGATTTGATAGTCTTTGAT CTGCAGTCGCTCGTTTTGGATGCACTACTGCGTCCTGTGATGCAGCAGTG CTCCACGAACAAAATGGTCCGGCAAATTGCCAAGTGCTCCGCATCCTTTG TGAATTACCGCGAAATCCTGGCCAATCTGGCGGAACAGAAGGCGGGCAAA AGCATCGACACCATTGTGGTCATGTCGCAGGAACCGTATCCCATGTCAGC AGCCCAGTTCAAGCTGCTTATTGGACTCTATTTCCACGGCAACGAGTGCC ACACGAATTTTGCCAAGCTCTCGGCCAAGATCATGGTCTCCCAGAGATTC GCCTAGACGAAGGACAGAAGTTTGGAGCCACTACAGTGCCTTGGTAACCA GTTCCTGAGTTTAATCATAGCTGGCAGTATTGTAGTTATTCGCCGTATGC TCTTGCTTTTCAAACAATACTTACTTAGAACGTTTACCTTATGCATTATT AAAACATGCATTTTGTCAGGTTAGACGAATATTTTCAAAGCTGGAACGAA TTTTCCAATCTCGAACGAATTTCGAGTTATTAAGACTGCATTTCCATTTT ATTGACTTAAAGCTATTCATATTGCCTTCCCAAAAGATATCCAAATGGGG AACGGTCGAATATTTAAGAAAATGAATTTATAAAAGGCAAGGCACGCTAT ATTATATCCGCATATAATACTAAGACAGTGCGTACATTTGGCAAGAACTT AAGAAATACTGTACGTTGAAAATATCTCCCTACATGGCATCCATGCAAAA TGTTATACGAAAGCGAAGCAATCGAATGCTCGATCAAATATAAGACTTTA TTATAGTATACTATTTAGTCTAAAAGGGATTAAAACTACCAAAAAAAAAT TGCTGATAATTAATTATAATATACATACATATAACAATAATATTTATTAT GCTAAACGGAAATCTCAACTTAAGGGAATTTATATGAAATAAAAAAAAAA TTTCGAATGCATAAGATACGTAAATGCAGCTAAAAGTATTGGAGAATGTA TTCCGGAAATACGGCTAGTGATCTCCGGAACGCAAGCCACCAAAGCCCGT TTAAAAGGAACTAAAACTCATTCACATGTAGCCCCACCCCAAATCCCTGC TGCCTTCGTCTTCGATTGGAATCCGATCTCCGCATCCCAGCCTCATATGT AGTCCAGCATGCCGCTTATGATCTCAAAGGCATCCCGAGCCGTGGGCTCA ATGGCGCTGCTGGGCAGCAGATAACCGTGCACTCCGTTGTCCGCCAGCTG GAGCGTGTAGCTGAAGGGAATTCCGATCTCGTAGGCGGCAAAAGCGTCCG CACAGCCTGGATAAATCAAGGAAGCCAAAGGATTGGCAAGGTCGGATAAA GATCTCTATTATATTCTACTTCGAAGCAAATAATATAAATATTACGCACC CGATCGCTGTTCAATTAGATCGTTGGATGCGTCGACCTTATATCGGGACT TACTACCCTTTTTGCGCAATCCATCGGTACCCACCATCGCCACGTCCAGA AAATCATCCAATCTTTCTGAATTGAAAGTGGAATTGGCCTTGACCGGATA GGATATCACCTGACCATAGGCCTGTAGGGAAATGTAAAGCTGCAAAAATA ATGAATAAAGTTAATAAATCAAAAAATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4949-RA | 2036 | CG4949-RA | 56..2033 | 1..1978 | 9890 | 100 | Plus |
CG4949-RB | 2047 | CG4949-RB | 206..2047 | 136..1977 | 9210 | 100 | Plus |
CG8945-RC | 4363 | CG8945-RC | 4008..4200 | 1941..1749 | 965 | 100 | Minus |
CG8945-RC | 4363 | CG8945-RC | 4199..4363 | 1657..1493 | 825 | 100 | Minus |
CG4949-RB | 2047 | CG4949-RB | 12..148 | 1..137 | 685 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16968413..16968549 | 1..137 | 100 | -> | Plus |
chrX | 16968609..16970414 | 138..1943 | 96 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..594 | 63..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..594 | 63..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..594 | 63..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..594 | 63..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..594 | 63..656 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..1977 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..1977 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 37..2013 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 1..1977 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4949-RA | 37..2013 | 1..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17078872..17079008 | 1..137 | 100 | -> | Plus |
X | 17079068..17080907 | 138..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17078872..17079008 | 1..137 | 100 | -> | Plus |
X | 17079068..17080907 | 138..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17078872..17079008 | 1..137 | 100 | -> | Plus |
X | 17079068..17080907 | 138..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16972905..16973041 | 1..137 | 100 | -> | Plus |
arm_X | 16973101..16974940 | 138..1977 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17087166..17089005 | 138..1977 | 100 | Plus | |
X | 17086970..17087106 | 1..137 | 100 | -> | Plus |
Translation from 62 to 655
> LD46305.hyp MSLSDCNNNYIYLTGSEDYALNLAKLCERFATKEKRVLLITSRQQGMAKR YPWEAHNCSKYLTILQLVDVESTPLRMLEMQDSAESLRSPDLIVFDLQSL VLDALLRPVMQQCSTNKMVRQIAKCSASFVNYREILANLAEQKAGKSIDT IVVMSQEPYPMSAAQFKLLIGLYFHGNECHTNFAKLSAKIMVSQRFA*
Translation from 62 to 655
> LD46305.pep MSLSDCNNNYIYLTGSEDYALNLAKLCERFATKEKRVLLITSRQQGMAKR YPWEAHNCSKYLTILQLVDVESTPLRMLEMQDSAESLRSPDLIVFDLQSL VLDALLRPVMQQCSTNKMVRQIAKCSASFVNYREILANLAEQKAGKSIDT IVVMSQEPYPMSAAQFKLLIGLYFHGNECHTNFAKLSAKIMVSQRFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21740-PA | 189 | GF21740-PA | 12..189 | 3..194 | 483 | 53.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19094-PA | 197 | GG19094-PA | 1..197 | 1..197 | 1019 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24464-PA | 194 | GH24464-PA | 13..191 | 10..194 | 272 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4949-PC | 197 | CG4949-PC | 1..197 | 1..197 | 1001 | 100 | Plus |
CG4949-PA | 197 | CG4949-PA | 1..197 | 1..197 | 1001 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14796-PA | 198 | GI14796-PA | 12..194 | 9..193 | 393 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18275-PA | 212 | GL18275-PA | 12..208 | 9..194 | 515 | 50.3 | Plus |
Dper\GL17796-PA | 99 | GL17796-PA | 1..95 | 110..194 | 307 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18547-PA | 212 | GA18547-PA | 12..208 | 9..194 | 514 | 50.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13482-PA | 197 | GM13482-PA | 1..197 | 1..197 | 1027 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17325-PA | 197 | GD17325-PA | 1..197 | 1..197 | 1032 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19461-PA | 195 | GJ19461-PA | 1..192 | 1..194 | 422 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15470-PA | 200 | GK15470-PA | 11..199 | 9..196 | 412 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17640-PA | 198 | GE17640-PA | 1..198 | 1..197 | 1020 | 97 | Plus |