Clone LD46336 Report

Search the DGRC for LD46336

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:463
Well:36
Vector:pOT2
Associated Gene/TranscriptSry-delta-RA
Protein status:LD46336.pep: gold
Preliminary Size:1684
Sequenced Size:1575

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17958 2001-11-30 Blastp of sequenced clone
CG17958 2003-01-01 Sim4 clustering to Release 3
Sry-delta 2008-04-29 Release 5.5 accounting
Sry-delta 2008-08-15 Release 5.9 accounting
Sry-delta 2008-12-18 5.12 accounting

Clone Sequence Records

LD46336.complete Sequence

1575 bp (1575 high quality bases) assembled on 2001-11-30

GenBank Submission: AY069691

> LD46336.complete
ATCATTTTGCCAACTCTATTAAATTTCATACACAATTTAAAAGATTGTAA
ACAAACGCCGCACGAAACGGAATCGCTAAAAGGACCATCGTCGGCGCAAT
GGATACTTGCTTCTTCTGCGGCGCCGTCGATCTGAGCGACACGGGCTCCT
CCAGCTCCATGCGCTACGAGACGCTGTCGGCCAAGGTGCCGTCGTCGCAG
AAAACAGTGTCCCTGGTGCTCACCCACCTGGCCAACTGCATCCAGACGCA
GCTGGACCTGAAGCCCGGCGCCCGGCTGTGCCCGCGCTGCTTTCAGGAGC
TCTCCGACTACGACACGATCATGGTGAACCTGATGACCACCCAGAAGAGG
CTGACGACCCAGCTAAAGGGCGCTCTAAAGTCCGAGTTCGAGGTGCCGGA
GTCCGGCGAGGACATACTCGTGGAGGAGGTGGAGATACCCCAAAGCGATG
TCGAGACAGACGCCGATGCCGAGGCGGACGCCCTGTTCGTGGAGCTGGTC
AAGGATCAGGAGGAGTCCGACACGGAGATAAAGAGAGAGTTCGTGGACGA
GGAGGAGGAGGAGGACGACGACGACGACGACGAGTTCATCTGCGAGGACG
TGGATGTGGGCGACTCCGAGGCCCTGTATGGCAAGTCCTCCGATGGCGAG
GACAGGCCGACGAAGAAGCGCGTCAAGCAGGAGTGCACTACCTGCGGCAA
GGTGTACAACTCCTGGTATCAACTGCAGAAGCACATCAGCGAGGAGCACT
CCAAGCAGCCCAACCACATCTGCCCCATCTGCGGGGTGATCCGGCGCGAC
GAGGAGTACTTGGAGCTGCACATGAATCTGCACGAGGGCAAGACGGAAAA
GCAATGCCGCTACTGCCCCAAGAGCTTCTCGCGCCCGGTGAACACCCTGC
GCCACATGCGCATGCACTGGGACAAGAAGAAGTACCAGTGCGAGAAGTGC
GGCCTGAGGTTCTCCCAGGACAACCTACTCTACAACCACCGGCTGCGCCA
CGAGGCTGAGGAGAACCCCATCATATGCAGCATCTGCAATGTGTCGTTCA
AGTCGCGCAAGACCTTCAACCATCACACGCTCATTCACAAGGAGAACCGC
CCAAGACACTACTGCTCCGTCTGCCCCAAGTCCTTCACCGAGCGCTACAC
CCTCAAGATGCACATGAAGACCCACGAGGGCGACGTCGTTTACGGGGTTC
GCGAGGAGGCGCCCGCCGACGAGCAGCAGGTGGTGGAGGAGCTGCATGTG
GACGTCGACGAATCGGAGGCGGCCGTCACCGTCATCATGTCCGACAACGA
TGAGAACAGCGGCTTCTGTCTCATTTGCAATACCAACTTCGAGAACAAGA
AGGAGCTCGAACACCACTTGCAATTTGATCACGACGTGGTCTTGAAATAA
GCTACATTGCCTACAATAAGTAATTGTTTATCTTTCCCTAGTGTATTTCC
TCCTCTTTGTACTTGATTATTGTAGATTCCTACAAAATATAATTTACTGG
TATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA

LD46336.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:50:16
Subject Length Description Subject Range Query Range Score Percent Strand
Sry-beta.c 5242 Sry-beta.c 3667..5174 1..1508 7540 100 Plus
Sry-delta-RA 1546 Sry-delta-RA 36..1543 1..1508 7540 100 Plus
Sry-beta.c 5242 Sry-beta.c 803..940 816..953 300 81.1 Plus
Sry-beta.a 1232 Sry-beta.a 718..855 816..953 300 81.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 25865796..25867301 1..1506 7530 100 Plus
chr3R 27901430 chr3R 25862932..25863069 816..953 270 79.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:42:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:09:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30043381..30044888 1..1508 7540 100 Plus
3R 32079331 3R 30040517..30040654 816..953 300 81.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:16:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 29784212..29785719 1..1508 7540 100 Plus
3R 31820162 3R 29781348..29781485 816..953 300 81.1 Plus
Blast to na_te.dros performed on 2019-03-16 12:09:40 has no hits.

LD46336.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:10:18 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 25865796..25867301 1..1506 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:29:56 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 1..1302 99..1400 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:19:24 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 1..1302 99..1400 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:57:00 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 1..1302 99..1400 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:45:35 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 1..1302 99..1400 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:39:11 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 1..1302 99..1400 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 22:52:46 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 36..1541 1..1506 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:19:24 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 36..1541 1..1506 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:57:00 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 41..1546 1..1506 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:45:35 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 36..1541 1..1506 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:39:11 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
Sry-delta-RA 41..1546 1..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:10:18 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30043381..30044886 1..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:10:18 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30043381..30044886 1..1506 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:10:18 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30043381..30044886 1..1506 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:57:00 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25869103..25870608 1..1506 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:21:56 Download gff for LD46336.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29784212..29785717 1..1506 100   Plus

LD46336.pep Sequence

Translation from 98 to 1399

> LD46336.pep
MDTCFFCGAVDLSDTGSSSSMRYETLSAKVPSSQKTVSLVLTHLANCIQT
QLDLKPGARLCPRCFQELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVP
ESGEDILVEEVEIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVD
EEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQECTTCG
KVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTE
KQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLR
HEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERY
TLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDN
DENSGFCLICNTNFENKKELEHHLQFDHDVVLK*

LD46336.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:18:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22993-PA 430 GF22993-PA 1..430 1..433 1884 84.3 Plus
Dana\GF22992-PA 357 GF22992-PA 8..349 4..360 573 35.6 Plus
Dana\GF14340-PA 593 GF14340-PA 309..502 164..365 304 36.5 Plus
Dana\GF13861-PA 559 GF13861-PA 275..558 125..399 249 25.9 Plus
Dana\GF19706-PA 454 GF19706-PA 149..312 195..360 243 34.7 Plus
Dana\GF19706-PA 454 GF19706-PA 153..291 228..368 192 30.5 Plus
Dana\GF13861-PA 559 GF13861-PA 360..516 253..423 181 28.7 Plus
Dana\GF14340-PA 593 GF14340-PA 307..495 225..426 175 29.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11724-PA 431 GG11724-PA 1..431 1..433 2226 96.1 Plus
Dere\GG11722-PA 356 GG11722-PA 28..338 30..360 544 37 Plus
Dere\GG25148-PA 606 GG25148-PA 319..508 164..361 299 36.2 Plus
Dere\GG21465-PA 560 GG21465-PA 299..499 180..365 257 31 Plus
Dere\GG21465-PA 560 GG21465-PA 361..559 196..399 249 28.4 Plus
Dere\GG24566-PA 617 GG24566-PA 325..493 195..363 244 34.3 Plus
Dere\GG25148-PA 606 GG25148-PA 317..505 225..426 173 29.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19172-PA 419 GH19172-PA 1..417 1..432 1526 69.5 Plus
Dgri\GH19170-PA 347 GH19170-PA 8..336 4..359 549 35.9 Plus
Dgri\GH10919-PA 579 GH10919-PA 308..480 188..361 299 37.1 Plus
Dgri\GH10979-PA 578 GH10979-PA 318..517 180..365 254 30.5 Plus
Dgri\GH10979-PA 578 GH10979-PA 378..577 195..399 247 28.6 Plus
Dgri\GH10862-PA 748 GH10862-PA 392..560 196..364 247 34.9 Plus
Dgri\GH10919-PA 579 GH10919-PA 289..477 225..426 173 29.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
Sry-delta-PA 433 CG17958-PA 1..433 1..433 2326 100 Plus
Sry-beta-PB 356 CG7938-PB 28..338 30..360 597 35.9 Plus
Sry-beta-PA 356 CG7938-PA 28..338 30..360 597 35.9 Plus
CG15269-PA 587 CG15269-PA 302..491 164..361 327 36.2 Plus
crol-PF 907 CG14938-PF 279..494 196..425 299 28.7 Plus
Meics-PB 571 CG8474-PB 92..448 65..425 295 26.3 Plus
ZIPIC-PA 457 CG7928-PA 130..420 86..360 293 28.6 Plus
Meics-PA 583 CG8474-PA 92..460 65..425 282 25.5 Plus
crol-PC 756 CG14938-PC 167..430 178..428 277 25.8 Plus
crol-PF 907 CG14938-PF 362..581 195..428 266 27.2 Plus
crol-PH 686 CG14938-PH 213..431 196..428 266 25.8 Plus
crol-PB 891 CG14938-PB 390..636 195..428 266 26.4 Plus
crol-PI 962 CG14938-PI 390..636 195..428 266 26.4 Plus
crol-PE 962 CG14938-PE 390..636 195..428 266 26.4 Plus
crol-PA 962 CG14938-PA 390..636 195..428 266 26.4 Plus
Clamp-PA 561 CG1832-PA 300..500 180..365 265 31 Plus
crol-PC 756 CG14938-PC 296..519 195..428 264 26.8 Plus
crol-PI 962 CG14938-PI 502..725 195..428 264 26.8 Plus
crol-PE 962 CG14938-PE 502..725 195..428 264 26.8 Plus
crol-PA 962 CG14938-PA 502..725 195..428 264 26.8 Plus
crol-PG 878 CG14938-PG 418..641 195..428 264 26.8 Plus
erm-PB 603 CG31670-PB 312..474 196..360 263 34.3 Plus
erm-PA 611 CG31670-PA 320..482 196..360 263 34.3 Plus
erm-PC 654 CG31670-PC 320..482 196..360 263 34.3 Plus
erm-PD 698 CG31670-PD 320..482 196..360 263 34.3 Plus
crol-PF 907 CG14938-PF 448..670 196..428 262 27.4 Plus
crol-PD 878 CG14938-PD 419..641 196..428 262 27.4 Plus
Clamp-PA 561 CG1832-PA 362..558 196..397 261 29.3 Plus
Clamp-PB 566 CG1832-PB 367..563 196..397 261 29.3 Plus
Clamp-PB 566 CG1832-PB 300..505 180..365 260 30.3 Plus
crol-PF 907 CG14938-PF 307..522 196..425 257 27 Plus
Meics-PB 571 CG8474-PB 345..565 195..425 256 27.9 Plus
Meics-PA 583 CG8474-PA 357..577 195..425 256 27.9 Plus
CG42726-PA 441 CG42726-PA 43..293 164..428 255 24.5 Plus
CTCF-PA 818 CG8591-PA 351..574 195..429 253 25.5 Plus
crol-PB 891 CG14938-PB 335..549 196..425 252 26.5 Plus
crol-PI 962 CG14938-PI 335..549 196..425 252 26.5 Plus
crol-PE 962 CG14938-PE 335..549 196..425 252 26.5 Plus
crol-PA 962 CG14938-PA 335..549 196..425 252 26.5 Plus
CG4854-PA 319 CG4854-PA 61..316 89..334 251 27.5 Plus
crol-PB 891 CG14938-PB 279..521 196..425 249 26 Plus
crol-PI 962 CG14938-PI 279..521 196..425 249 26 Plus
crol-PE 962 CG14938-PE 279..521 196..425 249 26 Plus
crol-PA 962 CG14938-PA 279..521 196..425 249 26 Plus
CG12299-PA 736 CG12299-PA 311..552 195..432 248 26.9 Plus
trem-PA 439 CG4413-PA 110..412 72..365 247 23.7 Plus
crol-PH 686 CG14938-PH 297..459 195..359 246 30.1 Plus
crol-PB 891 CG14938-PB 502..664 195..359 246 30.1 Plus
crol-PD 878 CG14938-PD 279..493 196..425 245 25.7 Plus
CG7372-PA 971 CG7372-PA 542..797 111..365 245 24.8 Plus
CG6654-PA 639 CG6654-PA 363..599 165..424 244 26.2 Plus
crol-PG 878 CG14938-PG 279..552 196..428 242 23.9 Plus
CG7372-PA 971 CG7372-PA 547..831 103..376 242 23.6 Plus
CG4936-PA 521 CG4936-PA 355..495 189..331 241 33.6 Plus
prg-PB 558 CG9233-PB 66..432 60..423 241 22.5 Plus
prg-PA 558 CG9233-PA 66..432 60..423 241 22.5 Plus
dwg-PA 592 CG2711-PA 214..521 93..425 241 23.6 Plus
CG2712-PA 501 CG2712-PA 314..476 196..360 240 31.3 Plus
crol-PF 907 CG14938-PF 475..644 195..362 239 29.8 Plus
crol-PD 878 CG14938-PD 446..615 195..362 239 29.8 Plus
Kr-h1-PA 791 CG45074-PA 209..407 243..425 239 29.9 Plus
Kr-h1-PB 845 CG45074-PB 263..461 243..425 239 29.9 Plus
Opbp-PA 562 CG30443-PA 226..405 196..359 238 29 Plus
CG14711-PA 377 CG14711-PA 56..372 60..369 237 23.8 Plus
cg-PC 629 CG8367-PC 128..369 185..396 237 28.5 Plus
cg-PA 671 CG8367-PA 170..411 185..396 237 28.5 Plus
cg-PD 671 CG8367-PD 170..411 185..396 237 28.5 Plus
cg-PF 770 CG8367-PF 263..504 185..396 237 28.5 Plus
cg-PB 772 CG8367-PB 271..512 185..396 237 28.5 Plus
cg-PI 773 CG8367-PI 271..512 185..396 237 28.5 Plus
cg-PM 780 CG8367-PM 278..519 185..396 237 28.5 Plus
cg-PJ 825 CG8367-PJ 271..512 185..396 237 28.5 Plus
cg-PL 837 CG8367-PL 283..524 185..396 237 28.5 Plus
crol-PD 878 CG14938-PD 251..465 196..425 236 26.1 Plus
cg-PN 686 CG8367-PN 90..419 99..396 236 23.7 Plus
CG5245-PA 501 CG5245-PA 11..243 134..359 235 27.8 Plus
cg-PK 665 CG8367-PK 162..404 185..396 235 28 Plus
CG2202-PA 889 CG2202-PA 382..657 95..368 235 27.4 Plus
crol-PB 891 CG14938-PB 251..465 196..425 233 25.2 Plus
crol-PI 962 CG14938-PI 251..465 196..425 233 25.2 Plus
crol-PE 962 CG14938-PE 251..465 196..425 233 25.2 Plus
crol-PA 962 CG14938-PA 251..465 196..425 233 25.2 Plus
crol-PC 756 CG14938-PC 324..523 195..364 229 28.7 Plus
crol-PI 962 CG14938-PI 530..729 195..364 229 28.7 Plus
crol-PE 962 CG14938-PE 530..729 195..364 229 28.7 Plus
crol-PA 962 CG14938-PA 530..729 195..364 229 28.7 Plus
crol-PG 878 CG14938-PG 446..645 195..364 229 28.7 Plus
crol-PG 878 CG14938-PG 251..465 196..425 226 24.3 Plus
CG12299-PA 736 CG12299-PA 255..420 195..362 226 28.6 Plus
Meics-PB 571 CG8474-PB 289..504 195..423 224 24.5 Plus
Meics-PA 583 CG8474-PA 301..516 195..423 224 24.5 Plus
CG4936-PA 521 CG4936-PA 356..495 219..360 222 30.3 Plus
CG2202-PA 889 CG2202-PA 600..760 196..359 220 31.5 Plus
CG12299-PA 736 CG12299-PA 335..502 191..360 219 27.1 Plus
CG2202-PA 889 CG2202-PA 353..622 87..361 218 25.8 Plus
crol-PH 686 CG14938-PH 179..344 247..425 217 27.9 Plus
crol-PB 891 CG14938-PB 223..436 196..424 215 25.8 Plus
crol-PI 962 CG14938-PI 223..436 196..424 215 25.8 Plus
crol-PE 962 CG14938-PE 223..436 196..424 215 25.8 Plus
crol-PA 962 CG14938-PA 223..436 196..424 215 25.8 Plus
crol-PF 907 CG14938-PF 223..389 196..365 214 29.4 Plus
crol-PH 686 CG14938-PH 325..478 195..346 214 29.7 Plus
crol-PB 891 CG14938-PB 530..683 195..346 214 29.7 Plus
CG6654-PA 639 CG6654-PA 442..603 196..360 214 28.5 Plus
Kr-h1-PA 791 CG45074-PA 246..423 195..373 214 29.9 Plus
Kr-h1-PB 845 CG45074-PB 300..477 195..373 214 29.9 Plus
crol-PG 878 CG14938-PG 223..437 196..425 213 26.5 Plus
erm-PB 603 CG31670-PB 301..453 214..368 212 29 Plus
erm-PA 611 CG31670-PA 309..461 214..368 212 29 Plus
erm-PC 654 CG31670-PC 309..461 214..368 212 29 Plus
erm-PD 698 CG31670-PD 309..461 214..368 212 29 Plus
CG2712-PA 501 CG2712-PA 251..498 162..403 212 24.7 Plus
Opbp-PA 562 CG30443-PA 301..520 196..401 212 25.2 Plus
CG4854-PA 319 CG4854-PA 88..313 131..360 209 26.2 Plus
CG5245-PA 501 CG5245-PA 249..492 195..425 209 25.2 Plus
cg-PI 773 CG8367-PI 337..553 195..413 205 24.5 Plus
cg-PM 780 CG8367-PM 344..560 195..413 205 24.5 Plus
cg-PN 686 CG8367-PN 244..460 195..413 205 24.5 Plus
cg-PK 665 CG8367-PK 229..445 195..413 205 24.5 Plus
CTCF-PA 818 CG8591-PA 210..457 107..359 204 24.4 Plus
cg-PC 629 CG8367-PC 194..409 195..413 204 23.7 Plus
cg-PA 671 CG8367-PA 236..451 195..413 204 23.7 Plus
cg-PD 671 CG8367-PD 236..451 195..413 204 23.7 Plus
cg-PF 770 CG8367-PF 329..544 195..413 204 23.7 Plus
cg-PB 772 CG8367-PB 337..552 195..413 204 23.7 Plus
cg-PJ 825 CG8367-PJ 337..552 195..413 204 23.7 Plus
cg-PL 837 CG8367-PL 349..564 195..413 204 23.7 Plus
CG5245-PA 501 CG5245-PA 133..352 184..425 204 22.3 Plus
dwg-PA 592 CG2711-PA 262..523 86..359 203 25 Plus
CG15269-PA 587 CG15269-PA 293..488 218..426 202 27.4 Plus
Meics-PB 571 CG8474-PB 401..567 195..359 202 28.2 Plus
Meics-PA 583 CG8474-PA 413..579 195..359 202 28.2 Plus
CG2202-PA 889 CG2202-PA 573..735 196..362 202 31.1 Plus
Opbp-PA 562 CG30443-PA 67..375 99..425 195 22.9 Plus
crol-PF 907 CG14938-PF 221..408 223..424 190 22.8 Plus
crol-PD 878 CG14938-PD 221..409 223..425 186 23.2 Plus
crol-PB 891 CG14938-PB 221..409 223..425 185 22.2 Plus
crol-PI 962 CG14938-PI 221..409 223..425 185 22.2 Plus
crol-PE 962 CG14938-PE 221..409 223..425 185 22.2 Plus
crol-PA 962 CG14938-PA 221..409 223..425 185 22.2 Plus
crol-PG 878 CG14938-PG 221..409 223..425 185 22.2 Plus
CG4854-PA 319 CG4854-PA 180..287 253..362 176 34.5 Plus
CTCF-PA 818 CG8591-PA 408..610 195..360 173 25.9 Plus
dwg-PA 592 CG2711-PA 391..528 196..335 173 27.1 Plus
CG5245-PA 501 CG5245-PA 82..213 279..425 173 29.9 Plus
CG4936-PA 521 CG4936-PA 362..469 253..362 172 34.5 Plus
CTCF-PA 818 CG8591-PA 296..488 225..428 165 23.5 Plus
CG5245-PA 501 CG5245-PA 389..493 195..300 164 30.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24208-PA 411 GI24208-PA 1..411 1..433 1622 73.5 Plus
Dmoj\GI24206-PA 346 GI24206-PA 8..329 4..359 531 35.7 Plus
Dmoj\GI13302-PA 606 GI13302-PA 330..506 188..365 301 36.9 Plus
Dmoj\GI17493-PA 576 GI17493-PA 315..515 180..365 250 31.7 Plus
Dmoj\GI17493-PA 576 GI17493-PA 376..575 195..399 247 28.6 Plus
Dmoj\GI12352-PA 796 GI12352-PA 326..549 195..429 247 26.6 Plus
Dmoj\GI13302-PA 606 GI13302-PA 311..499 225..426 175 29.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14023-PA 421 GL14023-PA 1..421 1..433 1707 76.7 Plus
Dper\GL26031-PA 597 GL26031-PA 318..511 164..365 303 36.5 Plus
Dper\GL21685-PA 589 GL21685-PA 352..529 196..365 251 31.7 Plus
Dper\GL26169-PA 557 GL26169-PA 358..556 196..399 251 28.8 Plus
Dper\GL18461-PA 642 GL18461-PA 343..512 195..364 250 34.7 Plus
Dper\GL26169-PA 557 GL26169-PA 305..496 187..365 247 30.8 Plus
Dper\GL26169-PA 557 GL26169-PA 358..514 253..423 180 28.7 Plus
Dper\GL26031-PA 597 GL26031-PA 316..504 225..426 175 29.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14741-PA 419 GA14741-PA 1..419 1..433 1678 76 Plus
Dpse\GA26935-PA 356 GA26935-PA 8..350 4..359 536 34.5 Plus
Dpse\GA13615-PA 599 GA13615-PA 320..513 164..365 302 36.5 Plus
Dpse\GA14887-PA 557 GA14887-PA 358..556 196..399 251 28.8 Plus
Dpse\GA16381-PA 649 GA16381-PA 350..519 195..364 248 34.7 Plus
Dpse\GA14887-PA 557 GA14887-PA 305..496 187..365 247 30.8 Plus
Dpse\GA14887-PA 557 GA14887-PA 358..514 253..423 180 28.7 Plus
Dpse\GA13615-PA 599 GA13615-PA 318..506 225..426 175 29.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12855-PA 434 GM12855-PA 1..434 1..433 2282 98.2 Plus
Dsec\GM12853-PA 356 GM12853-PA 28..338 30..360 546 36 Plus
Dsec\GM15938-PA 643 GM15938-PA 358..547 164..361 300 36.2 Plus
Dsec\GM16114-PA 561 GM16114-PA 300..500 180..365 255 31 Plus
Dsec\GM16114-PA 561 GM16114-PA 362..560 196..399 247 29 Plus
Dsec\GM25799-PA 639 GM25799-PA 407..580 189..365 244 29.9 Plus
Dsec\GM25799-PA 639 GM25799-PA 359..525 195..366 220 33.3 Plus
Dsec\GM25799-PA 639 GM25799-PA 442..603 196..360 194 28.5 Plus
Dsec\GM15938-PA 643 GM15938-PA 356..544 225..426 175 29.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Sry-delta-PA 300 GD21498-PA 1..300 136..433 1501 96.7 Plus
Dsim\Sry-beta-PA 356 GD21495-PA 28..338 30..360 545 36.2 Plus
Dsim\GD21497-PA 75 GD21497-PA 1..66 1..66 343 97 Plus
Dsim\GD23994-PA 592 GD23994-PA 307..496 164..361 299 36.2 Plus
Dsim\GD22883-PA 620 GD22883-PA 319..487 195..363 244 34.3 Plus
Dsim\GD23994-PA 592 GD23994-PA 305..493 225..426 174 29.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10777-PA 412 GJ10777-PA 1..412 1..433 1590 73.7 Plus
Dvir\Sry-beta-PA 346 GJ10775-PA 8..327 4..359 547 35 Plus
Dvir\GJ11932-PA 596 GJ11932-PA 311..504 164..365 298 36 Plus
Dvir\GJ10213-PA 615 GJ10213-PA 384..557 189..365 257 31.6 Plus
Dvir\GJ15143-PA 584 GJ15143-PA 323..523 180..365 249 31.7 Plus
Dvir\GJ15143-PA 584 GJ15143-PA 385..583 196..399 247 28.8 Plus
Dvir\GJ10213-PA 615 GJ10213-PA 419..582 196..362 206 29.3 Plus
Dvir\GJ10213-PA 615 GJ10213-PA 336..502 195..366 204 31.6 Plus
Dvir\GJ11932-PA 596 GJ11932-PA 309..497 225..426 172 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13867-PA 427 GK13867-PA 1..427 1..433 1644 75.7 Plus
Dwil\GK13865-PA 402 GK13865-PA 28..378 30..359 557 35.5 Plus
Dwil\GK13423-PA 276 GK13423-PA 15..276 27..362 446 32.6 Plus
Dwil\GK18315-PA 593 GK18315-PA 332..504 188..361 299 37.1 Plus
Dwil\GK15349-PA 566 GK15349-PA 311..505 187..365 253 31.8 Plus
Dwil\GK15349-PA 566 GK15349-PA 359..528 185..360 245 30.1 Plus
Dwil\GK15349-PA 566 GK15349-PA 394..529 195..332 191 31.2 Plus
Dwil\GK18315-PA 593 GK18315-PA 313..501 225..426 172 29.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10853-PA 433 GE10853-PA 1..433 1..433 2065 95.8 Plus
Dyak\GE10851-PA 356 GE10851-PA 28..338 30..360 551 36.8 Plus
Dyak\GE20880-PA 596 GE20880-PA 310..499 164..361 300 36.2 Plus
Dyak\GE12967-PA 561 GE12967-PA 300..500 180..365 254 32 Plus
Dyak\GE20043-PA 573 GE20043-PA 157..452 107..426 251 25.4 Plus
Dyak\GE12967-PA 561 GE12967-PA 362..523 196..360 246 30.3 Plus
Dyak\GE20043-PA 573 GE20043-PA 348..569 195..426 229 28.2 Plus
Dyak\GE20043-PA 573 GE20043-PA 292..507 195..423 196 24.5 Plus
Dyak\GE20880-PA 596 GE20880-PA 308..496 225..426 174 29.2 Plus
Dyak\GE20043-PA 573 GE20043-PA 371..570 184..359 168 27.8 Plus

LD46336.hyp Sequence

Translation from 98 to 1399

> LD46336.hyp
MDTCFFCGAVDLSDTGSSSSMRYETLSAKVPSSQKTVSLVLTHLANCIQT
QLDLKPGARLCPRCFQELSDYDTIMVNLMTTQKRLTTQLKGALKSEFEVP
ESGEDILVEEVEIPQSDVETDADAEADALFVELVKDQEESDTEIKREFVD
EEEEEDDDDDDEFICEDVDVGDSEALYGKSSDGEDRPTKKRVKQECTTCG
KVYNSWYQLQKHISEEHSKQPNHICPICGVIRRDEEYLELHMNLHEGKTE
KQCRYCPKSFSRPVNTLRHMRMHWDKKKYQCEKCGLRFSQDNLLYNHRLR
HEAEENPIICSICNVSFKSRKTFNHHTLIHKENRPRHYCSVCPKSFTERY
TLKMHMKTHEGDVVYGVREEAPADEQQVVEELHVDVDESEAAVTVIMSDN
DENSGFCLICNTNFENKKELEHHLQFDHDVVLK*

LD46336.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:39:04
Subject Length Description Subject Range Query Range Score Percent Strand
Sry-delta-PA 433 CG17958-PA 1..433 1..433 2326 100 Plus
Sry-beta-PB 356 CG7938-PB 28..338 30..360 597 35.9 Plus
Sry-beta-PA 356 CG7938-PA 28..338 30..360 597 35.9 Plus
CG15269-PA 587 CG15269-PA 302..491 164..361 327 36.2 Plus
CG7928-PA 457 CG7928-PA 130..420 86..360 293 28.6 Plus
CG15269-PA 587 CG15269-PA 293..488 218..426 202 27.4 Plus