BDGP Sequence Production Resources |
Search the DGRC for LD46344
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 463 |
Well: | 44 |
Vector: | pOT2 |
Associated Gene/Transcript | Phb2-RA |
Protein status: | LD46344.pep: gold |
Preliminary Size: | 1631 |
Sequenced Size: | 1486 |
Gene | Date | Evidence |
---|---|---|
CG15081 | 2001-01-01 | Release 2 assignment |
CG15081 | 2001-10-10 | Blastp of sequenced clone |
CG15081 | 2003-01-01 | Sim4 clustering to Release 3 |
l(2)03709 | 2008-04-29 | Release 5.5 accounting |
l(2)03709 | 2008-08-15 | Release 5.9 accounting |
l(2)03709 | 2008-12-18 | 5.12 accounting |
1486 bp (1486 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061508
> LD46344.complete CACCGAACCAAACGTGCGTGAGAGTTTCCCAATTTTAAGACAAACAAGAT GGCACAGAGCAAATTGAACGATCTTGCCGGCAAGCTGGGCAAAGGTGGTC CGCCGGGATTGGGAATCGGACTGAAGGTCCTGGCCGCCGTGGGAGCAGCC GCCTATGGAGTCAGTCAGTCCCTGTACACCGTTGAGGGTGGTCACCGCGC CATCATCTTCAGCCGTCTGGGCGGCATCCAGAGCGACATTTACTCCGAGG GACTGCACGTGCGCATCCCCTGGTTCCAGTATCCCATTATCTATGACATT CGCTCGCGTCCCCGCAAAATATCCTCGCCCACTGGCTCCAAGGATCTGCA GATGATCAACATCTCGCTGCGTGTGCTGTCGCGCCCCGATTCCCTGAACC TGCCCTATCTGCACAAGCAGCTGGGCGTGGACTACGACGAGAAGGTGCTG CCCTCCATTTGCAACGAGGTGCTGAAGAGCGTGATTGCCAAGTTCAATGC CTCGCAGCTTATTACCCAGCGTCAGCAGGTATCCCTACTCATCCGCAAGG AGCTGGTCGAGCGCGCCCGCGACTTCAACATCATTCTGGACGATGTGTCC CTCACCGAGCTGAGCTTCGGCAAGGAATACACGGCGGCCATTGAGGCCAA ACAAGTGGCTCAGCAGGAGGCACAGCGGGCTGTCTTCTTTGTGGAGCGCG CCAAGCAGGAGAAGCAGCAGAAGATTGTTCAGGCTGAGGGAGAAGCCGAG GCTGCTAAAATGTTAGGTCTGGCCGTGAAGCAGAACCCAGCCTACCTGAA GCTGCGCAAGCTGCGTGCCGCTCAAAGCATTGCACGCACGATTGCCAGCT CACAGAACAAGGTCTATTTGTCGGCGGATAGCTTGATGCTTAACATCCAG GACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCT CTCGTTTTGATTAACAAAAAGAGTTTACTTTTAAGTTGAAAACACTTGTA CTTTTGGTTTCAATCACATTGGCCAAAACTTAGACATAGCCTTCATAATT GAGTAATTTCTAACGCGTTTTCCGTACTCCATCTCTCTTCCTATTTGCCG CACAAAATTTCGTTCTGTTAACGTTTCACCCGATCGCGCAACCCAGTAGC CGATGACCTGGACTAGGAGGCGATCCACATTCGTTGTTAATTAATTTTTA TTGAAATTCCTTCGAGCTAGAGCCTAAGTACCGTTTAGTTTTAACCACTC CCAAGCGGCGCATTGGCTTCATTTTTTCACGAATTATCTGCCAAGGATTG AAACACGGCCAGGCATTTTGTGGACCAATGATACCAATGCGGGCAAATGG CCGCATCAGCATTTAACTTTCCATGTCCCATCATCGAGAGTCACGTGAAA CGGAAACTGAAAATAAATGCGTACTGAGAACTGTCTGAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
l(2)03709.d | 1559 | l(2)03709.d | 34..1328 | 1..1295 | 6475 | 100 | Plus |
l(2)03709.b | 1526 | l(2)03709.b | 34..1325 | 1..1295 | 6405 | 99.7 | Plus |
l(2)03709-RF | 1633 | l(2)03709-RF | 144..1402 | 37..1295 | 6295 | 100 | Plus |
l(2)03709.d | 1559 | l(2)03709.d | 1381..1531 | 1289..1439 | 755 | 100 | Plus |
l(2)03709-RF | 1633 | l(2)03709-RF | 1455..1605 | 1289..1439 | 755 | 100 | Plus |
l(2)03709.b | 1526 | l(2)03709.b | 1378..1526 | 1289..1437 | 745 | 100 | Plus |
l(2)03709-RF | 1633 | l(2)03709-RF | 12..47 | 1..36 | 180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14708277..14708732 | 840..1295 | 2265 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 14707288..14707638 | 181..531 | 1710 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 14707696..14707931 | 527..762 | 1180 | 100 | Plus |
chr2R | 21145070 | chr2R | 14708785..14708933 | 1289..1437 | 745 | 100 | Plus |
chr2R | 21145070 | chr2R | 14706723..14706867 | 37..181 | 725 | 100 | Plus |
chr2R | 21145070 | chr2R | 14708135..14708212 | 763..840 | 375 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18821183..18821638 | 840..1295 | 2280 | 100 | Plus |
2R | 25286936 | 2R | 18820195..18820545 | 181..531 | 1755 | 100 | Plus |
2R | 25286936 | 2R | 18820603..18820838 | 527..762 | 1180 | 100 | Plus |
2R | 25286936 | 2R | 18821691..18821841 | 1289..1439 | 755 | 100 | Plus |
2R | 25286936 | 2R | 18819621..18819765 | 37..181 | 725 | 100 | Plus |
2R | 25286936 | 2R | 18821041..18821118 | 763..840 | 390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18822382..18822837 | 840..1295 | 2280 | 100 | Plus |
2R | 25260384 | 2R | 18821394..18821744 | 181..531 | 1755 | 100 | Plus |
2R | 25260384 | 2R | 18821802..18822037 | 527..762 | 1180 | 100 | Plus |
2R | 25260384 | 2R | 18822890..18823040 | 1289..1439 | 755 | 100 | Plus |
2R | 25260384 | 2R | 18820820..18820964 | 37..181 | 725 | 100 | Plus |
2R | 25260384 | 2R | 18822240..18822317 | 763..840 | 390 | 100 | Plus |
2R | 25260384 | 2R | 18820688..18820723 | 1..36 | 180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 2527..2594 | 927..993 | 130 | 67.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14706723..14706867 | 37..181 | 100 | -> | Plus |
chr2R | 14707289..14707635 | 182..528 | 99 | -> | Plus |
chr2R | 14707698..14707936 | 529..766 | 98 | -> | Plus |
chr2R | 14706591..14706626 | 1..36 | 100 | -> | Plus |
chr2R | 14708139..14708212 | 767..840 | 98 | -> | Plus |
chr2R | 14708278..14708731 | 841..1295 | 99 | -> | Plus |
chr2R | 14708792..14708933 | 1296..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RA | 1..900 | 49..948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RA | 1..900 | 49..948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RB | 1..900 | 49..948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RB | 1..900 | 49..948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Phb2-RB | 1..900 | 49..948 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RB | 23..1458 | 1..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RA | 1..29 | 8..36 | 100 | -> | Plus |
l(2)03709-RA | 126..1525 | 37..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RA | 23..58 | 1..36 | 100 | -> | Plus |
l(2)03709-RA | 155..1554 | 37..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
l(2)03709-RB | 23..1458 | 1..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Phb2-RA | 23..58 | 1..36 | 100 | -> | Plus |
Phb2-RA | 155..1554 | 37..1437 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18819489..18819524 | 1..36 | 100 | -> | Plus |
2R | 18819621..18819765 | 37..181 | 100 | -> | Plus |
2R | 18820196..18820542 | 182..528 | 100 | -> | Plus |
2R | 18820605..18820843 | 529..766 | 98 | -> | Plus |
2R | 18821045..18821118 | 767..840 | 100 | -> | Plus |
2R | 18821184..18821637 | 841..1295 | 99 | -> | Plus |
2R | 18821698..18821839 | 1296..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18819489..18819524 | 1..36 | 100 | -> | Plus |
2R | 18819621..18819765 | 37..181 | 100 | -> | Plus |
2R | 18820196..18820542 | 182..528 | 100 | -> | Plus |
2R | 18820605..18820843 | 529..766 | 98 | -> | Plus |
2R | 18821045..18821118 | 767..840 | 100 | -> | Plus |
2R | 18821184..18821637 | 841..1295 | 99 | -> | Plus |
2R | 18821698..18821839 | 1296..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18819489..18819524 | 1..36 | 100 | -> | Plus |
2R | 18819621..18819765 | 37..181 | 100 | -> | Plus |
2R | 18820196..18820542 | 182..528 | 100 | -> | Plus |
2R | 18820605..18820843 | 529..766 | 98 | -> | Plus |
2R | 18821045..18821118 | 767..840 | 100 | -> | Plus |
2R | 18821184..18821637 | 841..1295 | 99 | -> | Plus |
2R | 18821698..18821839 | 1296..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14706994..14707029 | 1..36 | 100 | -> | Plus |
arm_2R | 14707126..14707270 | 37..181 | 100 | -> | Plus |
arm_2R | 14707701..14708047 | 182..528 | 100 | -> | Plus |
arm_2R | 14708110..14708348 | 529..766 | 98 | -> | Plus |
arm_2R | 14708550..14708623 | 767..840 | 100 | -> | Plus |
arm_2R | 14708689..14709142 | 841..1295 | 99 | -> | Plus |
arm_2R | 14709203..14709344 | 1296..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18821395..18821741 | 182..528 | 100 | -> | Plus |
2R | 18821804..18822042 | 529..766 | 98 | -> | Plus |
2R | 18822244..18822317 | 767..840 | 100 | -> | Plus |
2R | 18822383..18822836 | 841..1295 | 99 | -> | Plus |
2R | 18822897..18823038 | 1296..1437 | 100 | Plus | |
2R | 18820688..18820723 | 1..36 | 100 | -> | Plus |
2R | 18820820..18820964 | 37..181 | 100 | -> | Plus |
Translation from 48 to 947
> LD46344.pep MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHR AIIFSRLGGIQSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDL QMINISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFN ASQLITQRQQVSLLIRKELVERARDFNIILDDVSLTELSFGKEYTAAIEA KQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKMLGLAVKQNPAYL KLRKLRAAQSIARTIASSQNKVYLSADSLMLNIQDSGFDDMTEKVYKSK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11118-PA | 241 | GF11118-PA | 1..241 | 1..241 | 1237 | 97.5 | Plus |
Dana\GF15209-PA | 276 | GF15209-PA | 12..270 | 21..283 | 640 | 50 | Plus |
Dana\GF11119-PA | 105 | GF11119-PA | 10..68 | 239..297 | 301 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21927-PA | 326 | GG21927-PA | 1..285 | 1..297 | 1467 | 95.6 | Plus |
Dere\GG21649-PA | 276 | GG21649-PA | 12..270 | 21..283 | 672 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22126-PA | 323 | GH22126-PA | 1..288 | 1..297 | 1461 | 95.3 | Plus |
Dgri\GH13482-PA | 276 | GH13482-PA | 12..270 | 21..283 | 666 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Phb2-PF | 299 | CG15081-PF | 1..299 | 1..299 | 1476 | 100 | Plus |
Phb2-PA | 299 | CG15081-PA | 1..299 | 1..299 | 1476 | 100 | Plus |
Phb2-PB | 299 | CG15081-PB | 1..299 | 1..299 | 1476 | 100 | Plus |
Phb2-PC | 299 | CG15081-PC | 1..299 | 1..299 | 1476 | 100 | Plus |
Phb2-PE | 338 | CG15081-PE | 1..297 | 1..297 | 1467 | 100 | Plus |
Phb2-PD | 303 | CG15081-PD | 1..297 | 1..297 | 1467 | 100 | Plus |
l(2)37Cc-PD | 276 | CG10691-PD | 12..270 | 21..283 | 644 | 50.6 | Plus |
l(2)37Cc-PA | 276 | CG10691-PA | 12..270 | 21..283 | 644 | 50.6 | Plus |
l(2)37Cc-PB | 276 | CG10691-PB | 12..270 | 21..283 | 644 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19355-PA | 315 | GI19355-PA | 1..278 | 1..297 | 1411 | 92.3 | Plus |
Dmoj\GI17234-PA | 276 | GI17234-PA | 12..270 | 21..283 | 631 | 49.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11231-PA | 229 | GL11231-PA | 1..229 | 1..229 | 993 | 94.8 | Plus |
Dper\GL21128-PA | 276 | GL21128-PA | 12..270 | 21..283 | 623 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13475-PA | 331 | GA13475-PA | 1..288 | 1..297 | 1276 | 92.9 | Plus |
Dpse\GA10498-PA | 276 | GA10498-PA | 12..270 | 21..283 | 623 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21919-PA | 361 | GM21919-PA | 1..320 | 1..297 | 1513 | 92.2 | Plus |
Dsec\GM17028-PA | 276 | GM17028-PA | 12..270 | 21..283 | 672 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15441-PA | 361 | GD15441-PA | 1..320 | 1..297 | 1513 | 92.2 | Plus |
Dsim\GD21777-PA | 276 | GD21777-PA | 12..270 | 21..283 | 672 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20339-PA | 323 | GJ20339-PA | 1..288 | 1..297 | 1469 | 95.6 | Plus |
Dvir\GJ17994-PA | 276 | GJ17994-PA | 12..270 | 21..283 | 660 | 49.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18842-PA | 299 | GK18842-PA | 1..299 | 1..299 | 1530 | 98 | Plus |
Dwil\GK20926-PA | 326 | GK20926-PA | 1..288 | 1..297 | 1474 | 95.6 | Plus |
Dwil\GK24235-PA | 276 | GK24235-PA | 12..270 | 21..283 | 636 | 49.3 | Plus |
Translation from 48 to 880
> LD46344.hyp MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHR AIIFSRLGGIQSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDL QMINISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFN ASQLITQRQQVSLLIRKELVERARDFNIILDDVSLTELSFGKEYTAAIEA KQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKMISSGREAEPSLP EAAQAACRSKHCTHDCQLTEQGLFVGG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Phb2-PF | 299 | CG15081-PF | 1..248 | 1..248 | 1186 | 96.4 | Plus |
Phb2-PA | 299 | CG15081-PA | 1..248 | 1..248 | 1186 | 96.4 | Plus |
Phb2-PB | 299 | CG15081-PB | 1..248 | 1..248 | 1186 | 96.4 | Plus |
Phb2-PC | 299 | CG15081-PC | 1..248 | 1..248 | 1186 | 96.4 | Plus |
Phb2-PD | 303 | CG15081-PD | 1..248 | 1..248 | 1186 | 96.4 | Plus |