BDGP Sequence Production Resources |
Search the DGRC for LD46437
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 464 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | SelD-RA |
Protein status: | LD46437.pep: gold |
Preliminary Size: | 1738 |
Sequenced Size: | 1524 |
Gene | Date | Evidence |
---|---|---|
CG8553 | 2001-01-01 | Release 2 assignment |
CG8553 | 2002-04-04 | Blastp of sequenced clone |
CG8553 | 2003-01-01 | Sim4 clustering to Release 3 |
SelD | 2008-04-29 | Release 5.5 accounting |
SelD | 2008-08-15 | Release 5.9 accounting |
SelD | 2008-12-18 | 5.12 accounting |
1524 bp (1524 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095058
> LD46437.complete TGACATCTCGCTCGTTGGAAAAGCAAAAACCAGGCGCAAAATAAATATAA TTTGCTAACGTTACTCTACAATTATCTTTGTACAATCGCACAAGCAAACC TATAAAGCAAGATGAGCTACGCCGCTGATGTGCTGAACTCGGCCCATTTG GAGCTCCATGGTGGTGGCGACGCCGAGTTGCGTCGTCCATTCGATCCCAC GGCCCATGATTTGGATGCATCCTTCCGCCTTACACGCTTCGCAGATCTAA AGGGGCGCGGCTGCAAAGTGCCGCAGGATGTGCTCTCCAAGCTGGTGTCC GCCCTGCAGCAGGACTACTCTGCCCAGGACCAGGAACCGCAGTTTCTCAA CGTGGCCATTCCCCGCATCGGTATTGGCCTGGACTGCTCCGTCATTCCGC TGCGACACGGCGGACTCTGCCTGGTGCAGACCACCGATTTCTTTTACCCC ATTGTCGATGATCCCTACATGATGGGCAAAATTGCGTGCGCCAATGTGCT CAGCGATTTGTATGCCATGGGAGTCACAGATTGCGATAACATGCTGATGC TGTTGGCGGTCAGTACCAAGATGACAGAGAAGGAGCGTGACGTGGTCATT CCGCTGATAATGCGAGGCTTTAAGGACTCCGCTTTGGAGGCAGGCACCAC TGTGACTGGAGGCCAGAGCGTGGTCAATCCGTGGTGCACCATTGGTGGGG TTGCCTCGACCATTTGCCAGCCAAATGAGTATATTGTGCCAGATAATGCC GTGGTAGGGGATGTACTGGTGCTAACCAAGCCACTGGGCACCCAAGTGGC CGTGAATGCCCACCAGTGGATTGACCAGCCGGAGCGCTGGAACCGCATTA AGCTGGTGGTGTCCGAAGAAGATGTACGCAAGGCCTACCACCGGGCGATG AACTCTATGGCTCGCCTCAACCGCGTAGCCGCTCGCCTCATGCACAAGTA CAATGCCCACGGAGCCACCGATATTACTGGATTCGGACTACTAGGCCACG CTCAAACCCTGGCTGCACATCAGAAAAAGGATGTCTCCTTTGTTATCCAC AATCTGCCGGTGATCGCCAAGATGGCTGCAGTGGCCAAAGCCTGCGGCAA CATGTTCCAGCTGCTGCAGGGCCACTCGGCGGAGACCTCGGGAGGATTAC TGATCTGCCTGCCGCGAGAGCAGGCCGCTGCTTATTGCAAGGACATCGAG AAGCAGGAGGGCTACCAGGCCTGGATCATCGGCATCGTTGAGAAGGGCAA TAAGACCGCACGCATCATCGACAAGCCCCGCGTCATTGAGGTGCCCGCCA AGGACTAGGTCTCCATTGCCTGACCATCTGCTATTGTCTACCTTAAGTAT CTTAATATTAACGTAACGGCTGCTACATTCAGTTGTAACCGGCATGATCG GTCTTTGTTTTTTATAAAAAAGCTTATCAACTACAGATTCACTGATCATT ATAATCTTGGACGTCTCTACTGCAATACGAGTGAATAAAATGAAAACACT TGAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SelD-RA | 1596 | SelD-RA | 57..1560 | 1..1504 | 7520 | 100 | Plus |
SelD-RB | 1883 | SelD-RB | 481..1883 | 100..1502 | 7015 | 100 | Plus |
SelD-RB | 1883 | SelD-RB | 16..114 | 1..99 | 495 | 100 | Plus |
conv.a | 3634 | conv.a | 1..38 | 137..100 | 190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10156077..10157479 | 100..1502 | 99 | <- | Minus |
chr2R | 10157846..10157944 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 1..1197 | 112..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 1..1197 | 112..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RB | 1..1197 | 112..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 1..1197 | 112..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RB | 1..1197 | 112..1308 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 16..1517 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 16..1517 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 20..1521 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 16..1517 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SelD-RA | 20..1521 | 1..1502 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14268772..14270174 | 100..1502 | 100 | <- | Minus |
2R | 14270541..14270639 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14268772..14270174 | 100..1502 | 100 | <- | Minus |
2R | 14270541..14270639 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14268772..14270174 | 100..1502 | 100 | <- | Minus |
2R | 14270541..14270639 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10156277..10157679 | 100..1502 | 100 | <- | Minus |
arm_2R | 10158046..10158144 | 1..99 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14269971..14271373 | 100..1502 | 100 | <- | Minus |
2R | 14271740..14271838 | 1..99 | 100 | Minus |
Translation from 111 to 1307
> LD46437.pep MSYAADVLNSAHLELHGGGDAELRRPFDPTAHDLDASFRLTRFADLKGRG CKVPQDVLSKLVSALQQDYSAQDQEPQFLNVAIPRIGIGLDCSVIPLRHG GLCLVQTTDFFYPIVDDPYMMGKIACANVLSDLYAMGVTDCDNMLMLLAV STKMTEKERDVVIPLIMRGFKDSALEAGTTVTGGQSVVNPWCTIGGVAST ICQPNEYIVPDNAVVGDVLVLTKPLGTQVAVNAHQWIDQPERWNRIKLVV SEEDVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTL AAHQKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICL PREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11358-PA | 398 | GF11358-PA | 1..398 | 1..398 | 2130 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22431-PA | 398 | GG22431-PA | 1..398 | 1..398 | 2135 | 99.7 | Plus |
Dere\GG10111-PA | 318 | GG10111-PA | 1..315 | 87..393 | 763 | 48.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20096-PA | 398 | GH20096-PA | 1..398 | 1..398 | 2122 | 98.7 | Plus |
Dgri\GH13308-PA | 379 | GH13308-PA | 65..377 | 89..394 | 757 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SelD-PA | 398 | CG8553-PA | 1..398 | 1..398 | 2073 | 100 | Plus |
SelD-PB | 398 | CG8553-PB | 1..398 | 1..398 | 2073 | 100 | Plus |
Sps2-PC | 370 | CG5025-PC | 2..359 | 27..386 | 796 | 45.2 | Plus |
Sps2-PA | 370 | CG5025-PA | 2..359 | 27..386 | 796 | 45.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18994-PA | 398 | GI18994-PA | 1..398 | 1..398 | 2124 | 99 | Plus |
Dmoj\GI18171-PA | 314 | GI18171-PA | 1..312 | 90..394 | 741 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10201-PA | 398 | GL10201-PA | 1..398 | 1..398 | 2126 | 99.2 | Plus |
Dper\GL22405-PA | 364 | GL22405-PA | 7..364 | 18..354 | 956 | 53.1 | Plus |
Dper\GL14585-PA | 367 | GL14585-PA | 5..365 | 28..394 | 762 | 46.3 | Plus |
Dper\GL14807-PA | 491 | GL14807-PA | 4..366 | 27..394 | 742 | 42.9 | Plus |
Dper\GL23378-PA | 318 | GL23378-PA | 1..316 | 90..394 | 704 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21160-PA | 398 | GA21160-PA | 1..398 | 1..398 | 2126 | 99.2 | Plus |
Dpse\GA28664-PA | 395 | GA28664-PA | 10..392 | 20..394 | 1068 | 54.4 | Plus |
Dpse\GA28926-PA | 409 | GA28926-PA | 23..406 | 26..393 | 1060 | 54.6 | Plus |
Dpse\GA25337-PA | 368 | GA25337-PA | 4..366 | 27..394 | 751 | 43.1 | Plus |
Dpse\GA24104-PA | 369 | GA24104-PA | 11..367 | 34..394 | 735 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20218-PA | 398 | GM20218-PA | 1..398 | 1..398 | 2138 | 100 | Plus |
Dsec\GM18202-PA | 315 | GM18202-PA | 1..313 | 90..394 | 755 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25689-PA | 398 | GD25689-PA | 1..398 | 1..398 | 2138 | 100 | Plus |
Dsim\GD23681-PA | 318 | GD23681-PA | 1..316 | 87..394 | 761 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19958-PA | 398 | GJ19958-PA | 1..398 | 1..398 | 2124 | 99 | Plus |
Dvir\GJ14612-PA | 627 | GJ14612-PA | 313..613 | 89..383 | 778 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20859-PA | 398 | GK20859-PA | 1..398 | 1..398 | 2105 | 98 | Plus |
Translation from 111 to 1307
> LD46437.hyp MSYAADVLNSAHLELHGGGDAELRRPFDPTAHDLDASFRLTRFADLKGRG CKVPQDVLSKLVSALQQDYSAQDQEPQFLNVAIPRIGIGLDCSVIPLRHG GLCLVQTTDFFYPIVDDPYMMGKIACANVLSDLYAMGVTDCDNMLMLLAV STKMTEKERDVVIPLIMRGFKDSALEAGTTVTGGQSVVNPWCTIGGVAST ICQPNEYIVPDNAVVGDVLVLTKPLGTQVAVNAHQWIDQPERWNRIKLVV SEEDVRKAYHRAMNSMARLNRVAARLMHKYNAHGATDITGFGLLGHAQTL AAHQKKDVSFVIHNLPVIAKMAAVAKACGNMFQLLQGHSAETSGGLLICL PREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVIEVPAKD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SelD-PA | 398 | CG8553-PA | 1..398 | 1..398 | 2073 | 100 | Plus |
SelD-PB | 398 | CG8553-PB | 1..398 | 1..398 | 2073 | 100 | Plus |
Sps2-PC | 370 | CG5025-PC | 2..359 | 27..386 | 796 | 45.2 | Plus |
Sps2-PA | 370 | CG5025-PA | 2..359 | 27..386 | 796 | 45.2 | Plus |