BDGP Sequence Production Resources |
Search the DGRC for LD46465
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 464 |
Well: | 65 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9890-RA |
Protein status: | LD46465.pep: gold |
Preliminary Size: | 1650 |
Sequenced Size: | 1484 |
Gene | Date | Evidence |
---|---|---|
CG9890 | 2001-01-01 | Release 2 assignment |
CG9890 | 2001-10-10 | Blastp of sequenced clone |
CG9890 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9890 | 2008-04-29 | Release 5.5 accounting |
CG9890 | 2008-08-15 | Release 5.9 accounting |
CG9890 | 2008-12-18 | 5.12 accounting |
1484 bp (1484 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061510
> LD46465.complete AGAACGTAAACAAATGGAGCACGAGGTGGCTGTTTCAGGAGGGGATTCCT CGCTGGAGGAGATCACTGGCAGTTCGAAACTCAAGCCCTCCAAGAACACG GCCATCAAGTGCCTGAAATGCGACAAGGTGTACATATTTCCGTCAGATAA AGATGACTGCCTGGCGCATTTGTATATGGAGCACCGACTGGTCATCGCCG ATGTGGAGGATATAGCGCTTCTGGAGGACTACCTCCAGTACTGGGAAAAG GAGTTTCACACCCACGAATTCGAGCAATATTGCACCACAATGTTCCTGGA TCAGCTGCCCGATGGCAAGTACGCCAAGAACGAAAAGTACTACCTGCTGT GTGACATCCTGCCCCAGGACTACGAGCTGCGGCGAAGGTTGAAGGAGAAG CGCCTAAGTGAAGCCCTGGAGCGACATCAGTTCGAGCTAACCGACCGCAC CTTCTCCAAGGAGTGCCTTTTCTGCAGGGCCATCATCAAGGGATTGAGGG CGGACTATCTGGACCATCTGTTTGACAAGCACTTTCTGTTGGTCGGCAAG CCCGAGAAGCTGGTGTATGTGGACGAACTGCTGGATCACCTGGAGGAGAA CTTGAATCGGTTAATGTGCCTCTACTGCGAGAAGATCTTCAGGGATCGGC CCACGCTCAAGGAACACATGCGCAAGAAGGGCCACAAGCGGATCAATCCG AACCGAAGGGAGTACGACAAGTACTTCCTTATCAACTACAATCGTGTACC AACGGCCCCCACGCCCCGGAAACAGCACCTCCAAAAGCGAAGACGGGAAA CGGCATCCGTGTCCACAGTTGCTGATCCTGAAACCGGCAGCGTGGACTTC GACAAGCACTTCGCTCGCCCTGATTCGGATGGCGAACACGATTCGGACTG GTCGGATTGGGCGGCAGATGGTGAGCCTAGCTCCATTAAGTGCCTGTTTT GCCACCATCTCGGCGACAACTTCACCGCCCTCAAGAAGCACATGCACGAG GTTCATCGCTTGGATTTCGAGAAGGCCACCAGCTCTCTGAACTTCTACCA ACGCGTCAAGGTGGTCAACTACCTGCGCCGCCAAATGTGCCTGCTGCGCT GCGTGACCTGCGATCTGCAGTTCGACGAGGAGGAGCTGCTCGTGGAGCAC ATGGCACAAGAGTCGCACCACGGAATCGGCGATAAGGAGAGCTGGGACAA GCCCGAGTTCTTCTTCCCGTACATCGAGAACGATGGTCTGCTGTGTGTGC TGGATGATTCCGGAGGCGATGACCCGGACGTCGATACGGTGCGCATCATC TCCGAGGATAGTCTGGCGCAGATCAACAAGGATGCGGAGCGGTTGTCCCT CGAGAATTTTAAGCTGTTGTAACTGAGATTTTTGTATTGTACAGTTTACG TTTAAAAGAAACTAAGTAAATAGCAATGGAATTTAAAAAAAAAAAAAAAA AAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9890-RA | 1622 | CG9890-RA | 138..1573 | 1..1436 | 7180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1129..1195 | 1404..1333 | 141 | 70.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18949211..18950384 | 261..1434 | 99 | <- | Minus |
chr2R | 18950439..18950698 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 1..1359 | 14..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 1..1359 | 14..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 1..1359 | 14..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 1..1359 | 14..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 1..1359 | 14..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 31..1464 | 1..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 31..1464 | 1..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 27..1460 | 1..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 31..1464 | 1..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9890-RA | 27..1460 | 1..1434 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23062747..23063920 | 261..1434 | 100 | <- | Minus |
2R | 23063975..23064234 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23062747..23063920 | 261..1434 | 100 | <- | Minus |
2R | 23063975..23064234 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23062747..23063920 | 261..1434 | 100 | <- | Minus |
2R | 23063975..23064234 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18950270..18951443 | 261..1434 | 100 | <- | Minus |
arm_2R | 18951498..18951757 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23063964..23065137 | 261..1434 | 100 | <- | Minus |
2R | 23065192..23065451 | 1..260 | 100 | Minus |
Translation from 0 to 1371
> LD46465.hyp ERKQMEHEVAVSGGDSSLEEITGSSKLKPSKNTAIKCLKCDKVYIFPSDK DDCLAHLYMEHRLVIADVEDIALLEDYLQYWEKEFHTHEFEQYCTTMFLD QLPDGKYAKNEKYYLLCDILPQDYELRRRLKEKRLSEALERHQFELTDRT FSKECLFCRAIIKGLRADYLDHLFDKHFLLVGKPEKLVYVDELLDHLEEN LNRLMCLYCEKIFRDRPTLKEHMRKKGHKRINPNRREYDKYFLINYNRVP TAPTPRKQHLQKRRRETASVSTVADPETGSVDFDKHFARPDSDGEHDSDW SDWAADGEPSSIKCLFCHHLGDNFTALKKHMHEVHRLDFEKATSSLNFYQ RVKVVNYLRRQMCLLRCVTCDLQFDEEELLVEHMAQESHHGIGDKESWDK PEFFFPYIENDGLLCVLDDSGGDDPDVDTVRIISEDSLAQINKDAERLSL ENFKLL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9890-PA | 452 | CG9890-PA | 1..452 | 5..456 | 2437 | 100 | Plus |
Translation from 13 to 1371
> LD46465.pep MEHEVAVSGGDSSLEEITGSSKLKPSKNTAIKCLKCDKVYIFPSDKDDCL AHLYMEHRLVIADVEDIALLEDYLQYWEKEFHTHEFEQYCTTMFLDQLPD GKYAKNEKYYLLCDILPQDYELRRRLKEKRLSEALERHQFELTDRTFSKE CLFCRAIIKGLRADYLDHLFDKHFLLVGKPEKLVYVDELLDHLEENLNRL MCLYCEKIFRDRPTLKEHMRKKGHKRINPNRREYDKYFLINYNRVPTAPT PRKQHLQKRRRETASVSTVADPETGSVDFDKHFARPDSDGEHDSDWSDWA ADGEPSSIKCLFCHHLGDNFTALKKHMHEVHRLDFEKATSSLNFYQRVKV VNYLRRQMCLLRCVTCDLQFDEEELLVEHMAQESHHGIGDKESWDKPEFF FPYIENDGLLCVLDDSGGDDPDVDTVRIISEDSLAQINKDAERLSLENFK LL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11305-PA | 447 | GF11305-PA | 1..447 | 1..451 | 1953 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20073-PA | 451 | GG20073-PA | 1..451 | 1..451 | 2192 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20913-PA | 447 | GH20913-PA | 3..447 | 2..451 | 1809 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9890-PA | 452 | CG9890-PA | 1..452 | 1..452 | 2437 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18348-PA | 440 | GI18348-PA | 13..440 | 17..451 | 1814 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10852-PA | 447 | GL10852-PA | 1..447 | 1..451 | 1902 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22104-PA | 447 | GA22104-PA | 1..447 | 1..451 | 1908 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15588-PA | 452 | GM15588-PA | 1..452 | 1..452 | 2300 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25086-PA | 452 | GD25086-PA | 1..452 | 1..452 | 2300 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20747-PA | 446 | GJ20747-PA | 25..446 | 23..451 | 1854 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19602-PA | 450 | GK19602-PA | 3..450 | 6..451 | 1804 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11611-PA | 451 | GE11611-PA | 1..451 | 1..451 | 2262 | 93.6 | Plus |