Clone LD46479 Report

Search the DGRC for LD46479

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:464
Well:79
Vector:pOT2
Associated Gene/TranscriptNup153-RA
Protein status:LD46479.pep: gold
Preliminary Size:1286
Sequenced Size:7863

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4453 2003-01-01 Sim4 clustering to Release 3
CG4453 2005-05-03 Blastp of sequenced clone
Nup153 2008-04-29 Release 5.5 accounting
Nup153 2008-08-15 Release 5.9 accounting
Nup153 2008-12-18 5.12 accounting

Clone Sequence Records

LD46479.complete Sequence

7863 bp (7863 high quality bases) assembled on 2005-05-03

GenBank Submission: BT025178

> LD46479.complete
TTTCTTGCAAATCGGTGGTGCGTGTTCTCGTGCAACAATGGAAAACCTGA
ATGCGACCAGCGGCAAATGTTAAATTGCAATTAAAAGTGTGGATTTCGCG
GCGGTAAAACGCCAAAATTCGTACCGAATCGCTGCGCGCGTGTGTGTGTG
AGCAGAGCGTGAAGAAGAGGAACGAAGAATTGCGAAAGCAGTGTGTGCGG
AAGAAGTGGAAGAAGCACAAAGACAAAAGGAAGGTGAAAATATATCAAAT
ATATATCAAATCTATCCGGCAAAAGTAAAACAAATATTGAAGAAAACGGG
CGGCATGCTGGAAAGCGGTAAGGGCAAAGCCAAAAGCAAGAACCTCGAGC
GCTTCGCCCGAATTCGGTATTCAATCCTTTTTCCCGCCTCTAATTTTGCA
GTGCTTGTGCCCAGAATTTGCTCTTCATTGGTGGCCAAGAAGTCAAATCC
TGATCAAACGCGACCAGTTTGTGGCGCCAAACAGAATATTATTTAAAAAT
ATCGCGGCGTGTGTAAAACCTCGGCGAAACGCGAACAAAAAAAACCACGA
CGGCGTGCGTAAGCGCACTCACACCTTTGCACACGCACAGACAGAGAGAG
AAGGCAGGATAGAGAGTGAGAACGAAGCGAGTGAGCGAACATTATCCGCA
CCTACACATACAAACTAGCTCGCAGGAATTGCAACAGTGTGTGCTTTTTT
TTTGGTTTTTTTTTTTACTTACGTTTTTTGTTGTGTGTGCGGCAACGCTT
CTTTTTCGCGTTTTTTTTGCATCTCTCTTTTGTGCCGTTGCTTCGCCGGC
TAAAAAGGTGAGTCTGAATCTAAAGCGGCATAATGGAGGATGCACAGGAG
CAAAGGGAATCCTCGCAAGCCGAATTGGCCAAAAAGCATCCGCTGACGCC
GCTCAAGGAGCTGCCTGAAGAAAGCGAGGAGGAGGAGGAGGAAGAGGATG
AATCCTCGGCGGGAGCCCTACGGGAGTCTGACAGCAACAACTCCATCATG
GGGAAGATGAAGATGCGCGTGTCCAGCATTCTGCCCGCCTCCTTGAGCGG
TTGGTTTTCGCCGTCGTCCAAAGATGGGAACGATGCCTTATCCTCCCCAG
CTAATCTCCGCCAGTCACAGCCACGCCAGTCCAATGGACGCCTCACTACC
AAGCGGAAACGAGGACGCCGTCGGATAATGCTAGCCGAAGTGGATGCCGA
TGCAGCCGATGATCTTGATGACGGCTCCGATGCCAAAGGCCTCAACTATG
AGGAGGTGGCCCTGGCCGACAACATAGCCGAACACGACCTGGCCGCCGAG
GATGAACAGACGCGGCGGAGCGAGTACAATGTGTTCCTGCTGCGCAAGCG
AGCCGGGGCTGTTGCAGCTGCCGGCGGTGACGAGGATGAGGCCGAGGAGG
ATGAACTGGAAGAGGACGACGAGGATGGCGATGAGGAGGATGACGATGAA
GAGCAGGAGAATCTCCAACAGTCCGCCGCCGTGCAGACCAAGCGTCGACG
CCTGGAGCTGGAGACCCCCGTCAATTTGCCGAACATGCGTCGTCTGCCCC
TTTTGTCATCCACGCCTGCTGCTCCGCTCGCGGCTGCCACCAGCTCCTCC
AGCTCCCAGATGTACAAGGGCGTCAGCCACATTGCGCCACATCGGCGCAA
TCACCTCAATTTGTATGGTAGTCAACGGCAGCGCGAACCCGCGTACAACT
TTTTCACGGGCAACGAAGCTGCCGAGGGAAGCACCGGGGATCTGCCACAC
AGCATCCGCCGTTCACTGAACATACCTTTCGGAGGCAGCAGCACCGCTAC
CAGCTACAACAACAGCCTATCCAGCCTTCCTAACCACAAGCGACCATCGC
TCATAGGCAAGCAAACCCATCGACGCGATCTTACCATGGATGAGACGGGG
ACTGGCCCGGCCATGAGTTCGGAAGAACATCTCAATCATTTGCTGAGAAT
AAGCAGGACCAACAACAATACTAGCAACAATAATAATAATAATAATAACA
ACAACAATGTCATTGAGACAAAAACAAGACGAAGTGAACTGTCTGCGGCC
GCAGGAGGTTGCGGTGATTCGCAGTCCGAGAGCGATATGAACGAATACCA
CGACAATGGTGAAGGGCACGACGGACTTCGTCCGTCGCATTACAACAGCA
ACAGCAATTTAGAATTTTACGGAAATCTGCAGAGCTCCAAGTCAATATTT
AACAGAAGCAACACCGCCGCACAGCAATCGCATCGGAATTCTACGTGGTC
GCTGAATTCCCTTACCCAACGACGTCGCTTCAATGCGTCCATATACGGCA
GTACGTCGGCACTGAGCGACAGTCGTCTGCTTAGTGGCAGTGCCTCTAAC
TCAGGCTCTGCATCTGCCTCTAGCTCGCCCTTTTACCAGGGACGCACCAC
CTTCGGGGGCAATTCCGGCAACAATCGCCTCTTCAGTCGCAGCAATCTTA
GCTCATCCGCCGCATCCTCAATGTTGGGACTCAATTCTGCCGGCAGCTCA
CCGGCGCATCAGCTGCATGCTTCCATGACTGGTGGTATTGGATACGGTAT
GAAAGCGGTAGATATGCGACCTTCAGACTCCGGCAGTCTTGCGGAGACAT
CTGTGGGCCAAGGTGGCAGTAAGAAACCCGGTACCGGGCTGTCGAACACC
ACGATGCGCATTCTCAACCTACTTGAAAGCTACTCCACGCCATTGATCGA
TGCCAAGCGAATGGGGAGCAGCATCAAGGAGCATCAAAGCAGTCGCCAAC
AGCGCCAGGGTACGCCAGCCACCCCGTATCTACGTTCCACGAGTGCCAGC
CGCAATGTTTCGGTGCCCAATCACATCAACGAGTTGGCGGAACTGCGCTC
TAACAAACTGCTGGTGCCGACGATGCAGCAGCTTCTGGAACGTCGTCGTC
TACACCGCGTTACACAGAACTCTCGAGATGTGGTTCACAGCCAGAACGTT
CGTGCTGGTGGGGAAAACAACCAGGAGAAGCCCAAGCCAACTGCACCATA
TGTTGCTCCGATAGACCAGTCGGCTAACCATACTCAGCACACAAACAAGA
TGCGTTCGCGTCTTTCGCACCAGACGCGCAACAAGGAGACACGCACGGCG
GAAGAGGAAGCACCCCCGCCGCTGGATTTGCCACAGATCAGCTTTCCGGA
CATGGCAAGCGCCCCAAAGTTTGATTTGATAATCAAACCCACGGTGCCAG
TGGTATCAAAACCATCTACCACCGACCCAATCCAAAGTAGCAAAAGTAGC
AACACCAACCTCTCTACTACAAACTCCAAGCAGATGCCAAACTTCCTGGC
TAATCCCCAGCCTGCGGCACCAATTGTTAACTTCGCTGCCAATGGAAACG
TTTCTGCAATCAGTAAACCAAGTAAACGCACATTCACCTTCTCAGAACCC
ACACCTTTGTCGAACTTTCAGGAGAACTGCATCCCCAAGCCGAAGATCAA
TCGCAAATACACCTTCTCGGCACCGGCACCACTGGATGATTTGCGTATAA
CGAACAAACAGTCGCAGCCAACCATAAACGGAACGCCGTCATCCAAGGAG
TGGGAGTGTGATACGTGTATGGTGCGAAACAAGCCCGAGATCAACAAGTG
TGTGGCCTGTGAGACGGCCAAGCCGGTAGCATCTGCGGCTCCTGTCCAAG
CACCATTACCACCATCTACAGCAGCTATTGACACACAAAGTTTCGTTGGT
TTTGGGGATCGATTCAAGAAATCGACGACTGCCTGGGAGTGCGATGCCTG
CATGCTGTCCAATAAGGCTGAAGCCAGCAAATGCATTGCCTGCGAGACTC
CAAGGAAAACTGTTGCACCAAAGGTCAACAACTTCTCACCGTTGATTACA
AATGCGAAAAGCAACGAGTGGGAGTGCTCTGTGTGTCTGGTGCGCAACAA
AGTCGAGGTCAGCAAGTGTGTGGCCTGTGAGTCGGCCAAACCAGGCGCAA
CTATGGCTCTCCCTGCAACATCTAATATAGCTGTTGCGACTCCCTCTATA
ATTACGGATGGCTTTGGGGATCGATTCAAGAAATCAGCGACTGCCTGGGA
GTGCGATGCCTGCATGCTGTCCAATAAGGCTGAAGCCAGCAAATGCATTG
CCTGCGAAACTCCGCGAAAATCTTCGACTCCAATAGCGAACAGTAGTTAC
CCGTCGATCAACAATAATTTGCCAGCCGGATCCGGTTTTGATATTTCCTT
CACGCGAAAGGCAAACATGTGGGAGTGCCAAACATGCCTGGTGATGAACA
AGTCGAGTGATGAGGAATGCATTGCCTGTCAAACGCCAAACTCACAGGCG
AGAAACAGCAACAGCGAGTCCGCACTGATTTCATCCATAAGCTCTTCCTC
GGCATCGTTCTCCGGATCTTTATCCAGACCCTCATCTAGATCATCCTCTG
GGTCAACCTCAACCTGTGGGTCAGTTTGTTCGGGATCTATCGTCAGCATT
AGCTCCACCACCGAAAGCGCCAAAGCATTATCAGCAAAAAAGGTGCCCCC
CAAGCCGGATGCCGGATTTCAGCAGCTAGTGGCAGCCCAAAAAACATCAA
CTTGGGAATGCGAAGCATGCCTGGCAAAGAATGATATGTCGCGGAAGACG
TGTATCTGCTGTGAACAGATGATGCCGGAAGCATTTAACCCTGCCGCAAC
AACGGCCAACTCCGCAGCCAGTTCGGTGCCCAAATTCCGTTTTGGATTTT
CTCATGTAAAGGAGGTTGTCAAGCCATCTGTGGAAACGACGACCACACCA
GCACCAACTTCCGCTCAATTTAGCTTCGGTTTCGGCCAAAGCAATCAGGG
TAAGGATGTGGCGGACAGCAAGAAGACGGAGGCCCCGAAGACCTTTATGT
TTGGCGTGAGCAAAGTGGAAGAGCCCAAGACGGTGAGTTTTGGGACAGGC
ATCAAGGAAACAACGGCCACATCGAGCACAGAAGCTACAGCTCCAACTCC
AGCTGCAGCAGCACCAGCACCAGTCCAGTTTGTGTTCAAGGCACCGACTA
CCGCAACCACGGCCAGTTCACTCACCACCACAATCAGCACCACCAGCAAC
GCTCCTGCTTTGGGTGGCTTCAGCTTTGGCGCTCCATCATCGTCCTCTAC
AGTTTCCAGTTCGACGACTAGTACCAGTGCGAATCCCGCGGCTGTCAAAC
CGATGTTCAGCTGGTCCGGAGCTGGCAGTGCCGTGAGCAGCACCAGTAGC
AGCCAGCAGCCAGTGGCCAAGGCGCCAACCCTAGGTTTTGGTGTTTCCTC
CAGCACCGTAACAACGACAACAACCTCTACGAAAGTTTTTGCTTTCACAC
CGGCATCTGGTCTAGATCCGGCAGCAGCCACCTCGGCACCAGCTGCAGGT
GCCGGCTTCAGTTTTGGAAGTCAGTCAAAGCCAGCAACCACACAGAACAC
TGGAACCTTCTTCTTTGGCCAGCCAACAGCGGTTGCGCCAGCAACGCCAA
CCAACCCTAGCGTGAGCTCCATCTTCGGAGCACCGGCAACAAGTACCACT
GCAAGCACCAGCGTGAGTGCCACCACCAGCACCAGCACCGCCAACGCCAT
TGCTTCCAGCTTTGCGCCCACCTCGACCCCTCAGCTCTTTGGCAATTGGG
GTGAAAAGAAAACGGACTTGACCACCTTTGGTGCTTCTTCCGGTTCGGGA
ACGACTACAACGCCTAGCTTCGGCTGGTCGAGCAATGGAGATGCGGCAAA
GAGCAACAGCGCTGCGGTCGGCAGTGCGGCGGTGCCTTCGTCTTCGGCCT
CCACGATGGCGACTCCGATATTCGGCAGCAGTTCCATGTTTGGACCATCC
AGTAGCAGTAACAACACCACCAGCACCAGCACCACTAGTCTACCATTCGG
ATCAGCGGCGACCACTGCCGCAACTACGCCGGCGGGCGGCAATGCAGCCC
TTACTGGGTTATTCGGCAATGTGGGCAACTCTCTAGCGGGAGTAGGAGCT
CCTGTAGCCACAACACCAGCGGCAACAGCTGCTGCTCCATTGACCAACAT
CTTTGGCAATCCCACGCCAGTTGCTGCTGCCGCGCCTGTCTTCGGCAGCG
GAAGCACCATCCCAAGCGCAGGATTTGGAGCGCCTGCTGCAGCTGCTCCG
TTGGCGGCCCCAGCGTTACCAGGAGCATTTAACTTTGGCGGAGCAACTGC
AGCCACGCCAGCTGCCTCAAGTGCTCCATTTGTATTCGGAAGCAGCACCA
ATGAGCCGCTGGCCAAACCGTCGTTCAACTTCACCGGCTCGGCGGCCAGC
TCGACTGCTCCTGCGCCAGCCTTCAATTTCACGGCCAATACGGCGGCCAC
TAATAATCCCTCCGGTGGCGATTCCACACCGAATGCCAATGCACTGTTCC
AATTTAGCGCGACCTCCACAGCGCCAGCCAATATATTTGCCTTCAATCCG
CCAGCTGCGGGCAACTCGGCGCAGAGTTCCCAGACGGCTCGCCGCAAAAT
CCGCGCCCCCGTACGCCGTTTGCCGCCCCGGTAGAAATGGCATCGCAGTC
GGCCATCACGATAGCAAATGAGGCCGCCGTCGGATTAGGATTAAGATATT
GGCAGCCATTGCCGAGAGTAACAGAATCAGCAGTAGCAGCAAAAGCATCA
AGGGCCGAAAAGGAAAAGCAAGACACAGAAGACGCCGGCAACAATAGTGG
GCTCAAAGGTTCGGTCCAGAGCCAATATCACCAGGAGCCAGATATTCAAG
GATCATCGAGGATAAACATGCAGTCACCAAAGTCGCCATGTGTGAACAAA
TACCGCTTCGTACGCCGCCACAGCCTGAACTCTGAAACCAGGAAACCCTT
TAGCAGGAATATTTGGCAGAATACAACAGGAGAAGGCAATGAAACCAATG
GCGACGATGTCCCTAAAACACCAACAACTGGCGACCAGGAGGACAACCAA
CAGGAGGAACGAGATTCAGCGGTATATACATCAACAGAACGAACTGTACT
AGTAAGGACCCAATTCAAGATAGTGCGGCAAAGGAGCGTCATCTCGAAAC
CGAGACAGAAGCCTCCGACTTACTCTTAAAAAGCTAAGGAATAGGTTCGT
TCCACATCCTTCTCTGCTCTCCGATGATTGGGAGATGACCACGCGAATGT
CGCTCATACTACGCATATTGATGATTACAAATTATAAAAACACTTCGTTG
GATTTACGCGAGAATTCATCGCACCAAAAAAAAAACGAAAATGAATATAT
TTTAACGTTATTTTTGTTGAATATATAATATACCTTAACGATAATTATGT
AATAATTATTTTGCGAAATAGTAAAGAAACGTGTAATGCTGCAATCAAAC
AGAGATGCGAGGCCATGTAATAGCGCAAAAAATCAACTACTGTATAATGT
AGTAATACGTATATTCGAGTTATTGGCCGATACGTCGAGCATATGATGAT
TGCAGTCAGATAAGAGCGATCGGCAAACGATTGCATTAAGTCTTTAGTTT
TTGTTATTAATTTTAGCGTTTAGATTCACACACACACAATTCACACGAGG
AAAATACCTGCAACGACGTTCTGTGCAGCAGCCAAGGTGGAAAGCCAACA
AATTAAAGAAAAACAACTATCTAGCAACGTAAAGAAACCAACCAACCCTA
TAGCTAACAAGATAACAGATTAGATGAAAAGATTAGAGAGAATGGTGGCA
AACTGGAAAACCGAAAGAGTTATAATTGTATGCATGTTTTTTATATACAT
AAATTCATAAAGAACATTTAATATTTTATTTTAAGTTTATATTGATCATT
TTTAAGTCGAGAACAGAAATGGAAATCAGAAGTCTATGTTGAGAGAGAAA
CGGTATCATAATGTAAATAAGTAAATATATGCGGTATGATAATTTAAAAA
AAAAAAAAAAAAA

LD46479.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
Nup153-RC 7961 Nup153-RC 85..7932 1..7848 39240 100 Plus
Nup153-RA 7884 Nup153-RA 408..7855 401..7848 37240 100 Plus
Nup153-RB 8022 Nup153-RB 408..6331 401..6324 29620 100 Plus
Nup153-RB 8022 Nup153-RB 6468..7993 6323..7848 7630 100 Plus
Nup153-RB 8022 Nup153-RB 92..408 1..317 1585 100 Plus
Nup153-RA 7884 Nup153-RA 92..408 1..317 1585 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16491041..16495454 1751..6164 22055 100 Plus
chrX 22417052 chrX 16498674..16500128 6391..7845 7260 99.9 Plus
chrX 22417052 chrX 16488991..16489980 1..991 4905 99.9 Plus
chrX 22417052 chrX 16490047..16490562 992..1507 2565 99.8 Plus
chrX 22417052 chrX 16490619..16490865 1506..1752 1235 100 Plus
chrX 22417052 chrX 16495517..16495675 6164..6322 795 100 Plus
chrX 22417052 chrX 16492987..16493091 4009..4113 465 96.2 Plus
chrX 22417052 chrX 16493299..16493403 3697..3801 465 96.2 Plus
chrX 22417052 chrX 16497600..16497667 6323..6390 340 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:42:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16601374..16605787 1751..6164 22070 100 Plus
X 23542271 X 16609005..16610462 6391..7848 7290 100 Plus
X 23542271 X 16599323..16600313 1..991 4955 100 Plus
X 23542271 X 16600380..16600895 992..1507 2580 100 Plus
X 23542271 X 16600952..16601198 1506..1752 1235 100 Plus
X 23542271 X 16605850..16606008 6164..6322 795 100 Plus
X 23542271 X 16603320..16603424 4009..4113 465 96.2 Plus
X 23542271 X 16603632..16603736 3697..3801 465 96.2 Plus
X 23542271 X 16607933..16608000 6323..6390 340 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:11:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16609472..16613885 1751..6164 22070 100 Plus
X 23527363 X 16617103..16618560 6391..7848 7290 100 Plus
X 23527363 X 16607421..16608411 1..991 4955 100 Plus
X 23527363 X 16608478..16608993 992..1507 2580 100 Plus
X 23527363 X 16609050..16609296 1506..1752 1235 100 Plus
X 23527363 X 16613948..16614106 6164..6322 795 100 Plus
X 23527363 X 16616031..16616098 6323..6390 340 100 Plus
Blast to na_te.dros performed 2019-03-16 06:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2429..2699 1749..2021 138 54.1 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 3211..3328 3236..3352 129 60.3 Plus
roo 9092 roo DM_ROO 9092bp 1092..1165 6567..6641 128 68.4 Plus

LD46479.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:01:08 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16498674..16499969 6391..7686 99 == Plus
chrX 16500027..16500128 7744..7845 100   Plus
chrX 16488991..16489980 1..991 97 -> Plus
chrX 16490047..16490433 992..1378 99 == Plus
chrX 16490517..16490562 1462..1507 100 -> Plus
chrX 16490621..16490865 1508..1752 100 -> Plus
chrX 16491043..16495453 1753..6163 98 -> Plus
chrX 16495517..16495675 6164..6322 100 -> Plus
chrX 16497600..16497667 6323..6390 100 -> Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:10:07 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 1..5652 833..6484 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:48:29 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 1..5652 833..6484 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:14:14 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RA 1..5652 833..6484 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:42:16 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 1..5652 833..6484 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:12:36 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RA 1..5652 833..6484 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:10:07 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 1..7845 1..7845 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:48:28 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 1..7845 1..7845 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:14:14 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 83..7927 1..7845 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:42:16 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 1..7845 1..7845 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:12:36 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
Nup153-RC 83..7927 1..7845 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:08 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
X 16599323..16600313 1..991 100 -> Plus
X 16600380..16600895 992..1507 100 -> Plus
X 16600954..16601198 1508..1752 100 -> Plus
X 16601376..16605786 1753..6163 100 -> Plus
X 16605850..16606008 6164..6322 100 -> Plus
X 16607933..16608000 6323..6390 100 -> Plus
X 16609005..16610459 6391..7845 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:08 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
X 16599323..16600313 1..991 100 -> Plus
X 16600380..16600895 992..1507 100 -> Plus
X 16600954..16601198 1508..1752 100 -> Plus
X 16601376..16605786 1753..6163 100 -> Plus
X 16605850..16606008 6164..6322 100 -> Plus
X 16607933..16608000 6323..6390 100 -> Plus
X 16609005..16610459 6391..7845 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:08 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
X 16599323..16600313 1..991 100 -> Plus
X 16600380..16600895 992..1507 100 -> Plus
X 16600954..16601198 1508..1752 100 -> Plus
X 16601376..16605786 1753..6163 100 -> Plus
X 16605850..16606008 6164..6322 100 -> Plus
X 16607933..16608000 6323..6390 100 -> Plus
X 16609005..16610459 6391..7845 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:14:14 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16493356..16494346 1..991 100 -> Plus
arm_X 16494413..16494928 992..1507 100 -> Plus
arm_X 16494987..16495231 1508..1752 100 -> Plus
arm_X 16495409..16499819 1753..6163 100 -> Plus
arm_X 16499883..16500041 6164..6322 100 -> Plus
arm_X 16501966..16502033 6323..6390 100 -> Plus
arm_X 16503038..16504492 6391..7845 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:33:56 Download gff for LD46479.complete
Subject Subject Range Query Range Percent Splice Strand
X 16607421..16608411 1..991 100 -> Plus
X 16608478..16608993 992..1507 100 -> Plus
X 16609052..16609296 1508..1752 100 -> Plus
X 16609474..16613884 1753..6163 100 -> Plus
X 16613948..16614106 6164..6322 100 -> Plus
X 16616031..16616098 6323..6390 100 -> Plus
X 16617103..16618557 6391..7845 100   Plus

LD46479.pep Sequence

Translation from 832 to 6483

> LD46479.pep
MEDAQEQRESSQAELAKKHPLTPLKELPEESEEEEEEEDESSAGALRESD
SNNSIMGKMKMRVSSILPASLSGWFSPSSKDGNDALSSPANLRQSQPRQS
NGRLTTKRKRGRRRIMLAEVDADAADDLDDGSDAKGLNYEEVALADNIAE
HDLAAEDEQTRRSEYNVFLLRKRAGAVAAAGGDEDEAEEDELEEDDEDGD
EEDDDEEQENLQQSAAVQTKRRRLELETPVNLPNMRRLPLLSSTPAAPLA
AATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAYNFFTGNEAAEGS
TGDLPHSIRRSLNIPFGGSSTATSYNNSLSSLPNHKRPSLIGKQTHRRDL
TMDETGTGPAMSSEEHLNHLLRISRTNNNTSNNNNNNNNNNNVIETKTRR
SELSAAAGGCGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSNLEFYGNLQ
SSKSIFNRSNTAAQQSHRNSTWSLNSLTQRRRFNASIYGSTSALSDSRLL
SGSASNSGSASASSSPFYQGRTTFGGNSGNNRLFSRSNLSSSAASSMLGL
NSAGSSPAHQLHASMTGGIGYGMKAVDMRPSDSGSLAETSVGQGGSKKPG
TGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTPATPYL
RSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLERRRLHRVTQNSRDV
VHSQNVRAGGENNQEKPKPTAPYVAPIDQSANHTQHTNKMRSRLSHQTRN
KETRTAEEEAPPPLDLPQISFPDMASAPKFDLIIKPTVPVVSKPSTTDPI
QSSKSSNTNLSTTNSKQMPNFLANPQPAAPIVNFAANGNVSAISKPSKRT
FTFSEPTPLSNFQENCIPKPKINRKYTFSAPAPLDDLRITNKQSQPTING
TPSSKEWECDTCMVRNKPEINKCVACETAKPVASAAPVQAPLPPSTAAID
TQSFVGFGDRFKKSTTAWECDACMLSNKAEASKCIACETPRKTVAPKVNN
FSPLITNAKSNEWECSVCLVRNKVEVSKCVACESAKPGATMALPATSNIA
VATPSIITDGFGDRFKKSATAWECDACMLSNKAEASKCIACETPRKSSTP
IANSSYPSINNNLPAGSGFDISFTRKANMWECQTCLVMNKSSDEECIACQ
TPNSQARNSNSESALISSISSSSASFSGSLSRPSSRSSSGSTSTCGSVCS
GSIVSISSTTESAKALSAKKVPPKPDAGFQQLVAAQKTSTWECEACLAKN
DMSRKTCICCEQMMPEAFNPAATTANSAASSVPKFRFGFSHVKEVVKPSV
ETTTTPAPTSAQFSFGFGQSNQGKDVADSKKTEAPKTFMFGVSKVEEPKT
VSFGTGIKETTATSSTEATAPTPAAAAPAPVQFVFKAPTTATTASSLTTT
ISTTSNAPALGGFSFGAPSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSA
VSSTSSSQQPVAKAPTLGFGVSSSTVTTTTTSTKVFAFTPASGLDPAAAT
SAPAAGAGFSFGSQSKPATTQNTGTFFFGQPTAVAPATPTNPSVSSIFGA
PATSTTASTSVSATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFG
ASSGSGTTTTPSFGWSSNGDAAKSNSAAVGSAAVPSSSASTMATPIFGSS
SMFGPSSSSNNTTSTSTTSLPFGSAATTAATTPAGGNAALTGLFGNVGNS
LAGVGAPVATTPAATAAAPLTNIFGNPTPVAAAAPVFGSGSTIPSAGFGA
PAAAAPLAAPALPGAFNFGGATAATPAASSAPFVFGSSTNEPLAKPSFNF
TGSAASSTAPAPAFNFTANTAATNNPSGGDSTPNANALFQFSATSTAPAN
IFAFNPPAAGNSAQSSQTARRKIRAPVRRLPPR*

LD46479.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21251-PA 1862 GF21251-PA 4..1064 1..1034 1950 48.9 Plus
Dana\GF21251-PA 1862 GF21251-PA 915..1862 998..1883 1153 44.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19057-PA 1899 GG19057-PA 1..1899 1..1883 5860 75.3 Plus
Dere\GG11382-PA 2701 GG11382-PA 1761..1997 956..1177 202 31.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:54:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24489-PA 3505 GH24489-PA 2618..2986 956..1321 539 34.1 Plus
Dgri\GH22584-PA 2827 GH22584-PA 1784..2053 956..1177 211 25.4 Plus
Dgri\GH22584-PA 2827 GH22584-PA 1791..2030 902..1100 188 26.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
Nup153-PC 1883 CG4453-PC 1..1883 1..1883 9616 100 Plus
Nup153-PA 1883 CG4453-PA 1..1883 1..1883 9616 100 Plus
Nup153-PD 1929 CG4453-PD 1..1929 1..1883 9559 97.6 Plus
CG14712-PA 1266 CG14712-PA 505..1114 1292..1866 365 27.5 Plus
CG14712-PA 1266 CG14712-PA 513..1221 1204..1858 349 25.6 Plus
Muc91C-PB 949 CG7709-PB 305..908 1270..1863 327 25.2 Plus
Muc91C-PA 950 CG7709-PA 306..909 1270..1863 327 25.2 Plus
Muc91C-PB 949 CG7709-PB 285..869 1270..1869 312 26.1 Plus
Muc91C-PA 950 CG7709-PA 286..870 1270..1869 312 26.1 Plus
Nup214-PA 1711 CG3820-PA 1058..1672 1144..1824 310 26 Plus
Muc91C-PB 949 CG7709-PB 231..852 1297..1865 304 25.9 Plus
Muc91C-PA 950 CG7709-PA 232..853 1297..1865 304 25.9 Plus
Sgs1-PA 1286 CG3047-PA 137..908 1053..1868 304 20.6 Plus
Sgs1-PA 1286 CG3047-PA 273..956 1157..1868 295 20.7 Plus
CG46026-PA 666 CG46026-PA 131..664 1269..1848 294 23.5 Plus
Sgs1-PA 1286 CG3047-PA 59..1024 792..1848 293 19.5 Plus
CG14712-PA 1266 CG14712-PA 592..1248 1130..1783 290 25.6 Plus
CG46026-PA 666 CG46026-PA 120..621 1366..1869 286 22.8 Plus
Sgs1-PA 1286 CG3047-PA 277..1172 720..1691 284 20.3 Plus
CG46026-PA 666 CG46026-PA 125..663 1270..1823 284 22.8 Plus
Muc96D-PA 881 CG31439-PA 122..804 1150..1880 282 17.2 Plus
Muc11A-PB 1552 CG32656-PB 80..785 1167..1876 272 25.6 Plus
Muc68Ca-PA 3135 CG18331-PA 714..2362 292..1881 272 18.4 Plus
Muc68D-PB 1514 CG6004-PB 193..1127 861..1834 271 20.3 Plus
Muc11A-PB 1552 CG32656-PB 266..884 1295..1876 270 25.9 Plus
Muc68D-PB 1514 CG6004-PB 275..1240 712..1719 270 20.6 Plus
Muc96D-PA 881 CG31439-PA 11..643 1203..1868 269 18.4 Plus
Muc68Ca-PA 3135 CG18331-PA 116..707 1299..1868 266 23.7 Plus
Muc68Ca-PA 3135 CG18331-PA 404..1107 1141..1868 265 22.2 Plus
Nup98-96-PC 1179 CG10198-PC 13..550 1270..1789 263 26.1 Plus
Nup98-96-PD 1960 CG10198-PD 13..550 1270..1789 263 26.1 Plus
Nup98-96-PA 1960 CG10198-PA 13..550 1270..1789 263 26.1 Plus
Muc11A-PB 1552 CG32656-PB 293..928 1298..1876 261 25.8 Plus
Muc68D-PB 1514 CG6004-PB 280..1320 789..1828 259 21.3 Plus
Nup214-PA 1711 CG3820-PA 991..1670 1280..1867 258 25.1 Plus
Sgs1-PA 1286 CG3047-PA 228..1171 787..1823 258 19.1 Plus
CG46026-PA 666 CG46026-PA 132..658 1094..1646 258 22.1 Plus
Muc11A-PB 1552 CG32656-PB 544..1082 1354..1876 258 26.5 Plus
Muc11A-PB 1552 CG32656-PB 359..994 1298..1876 255 27.2 Plus
Muc11A-PB 1552 CG32656-PB 557..1177 1298..1866 249 26.3 Plus
Nup214-PA 1711 CG3820-PA 915..1530 1264..1856 243 24.4 Plus
CG14712-PA 1266 CG14712-PA 253..1217 632..1588 242 22 Plus
Muc68Ca-PA 3135 CG18331-PA 111..627 1357..1868 242 22.7 Plus
sbb-PE 929 CG5580-PE 19..812 1022..1853 242 23.2 Plus
sbb-PC 929 CG5580-PC 19..812 1022..1853 242 23.2 Plus
sbb-PF 939 CG5580-PF 29..822 1022..1853 242 23.2 Plus
sbb-PH 2302 CG5580-PH 19..812 1022..1853 242 23.2 Plus
sbb-PD 2302 CG5580-PD 19..812 1022..1853 242 23.2 Plus
sbb-PG 2312 CG5580-PG 29..822 1022..1853 242 23.2 Plus
sbb-PJ 2330 CG5580-PJ 29..822 1022..1853 242 23.2 Plus
CG46026-PA 666 CG46026-PA 132..666 990..1581 241 20.3 Plus
Mur29B-PA 555 CG31901-PA 84..489 1341..1740 241 23.6 Plus
Mur29B-PA 555 CG31901-PA 94..466 1299..1684 237 23.5 Plus
Vml-PB 578 CG34333-PB 30..513 1353..1879 237 25.5 Plus
Vml-PA 578 CG34333-PA 30..513 1353..1879 237 25.5 Plus
Muc91C-PA 950 CG7709-PA 230..759 1375..1869 233 23.4 Plus
Alh-PD 1323 CG1070-PD 199..948 1137..1825 232 23.7 Plus
Alh-PA 1376 CG1070-PA 252..1001 1137..1825 232 23.7 Plus
Alh-PP 1717 CG1070-PP 252..1001 1137..1825 232 23.7 Plus
Muc68D-PB 1514 CG6004-PB 264..1028 1084..1836 231 20.3 Plus
Vml-PB 578 CG34333-PB 101..520 1362..1806 230 25.3 Plus
Vml-PA 578 CG34333-PA 101..520 1362..1806 230 25.3 Plus
Muc11A-PB 1552 CG32656-PB 543..1261 1152..1858 229 24 Plus
Nup58-PA 546 CG7360-PA 2..258 1577..1824 226 34.3 Plus
Nup98-96-PC 1179 CG10198-PC 8..521 1430..1864 225 28 Plus
Nup98-96-PD 1960 CG10198-PD 8..521 1430..1864 225 28 Plus
Nup98-96-PA 1960 CG10198-PA 8..521 1430..1864 225 28 Plus
Alh-PL 1332 CG1070-PL 199..877 1137..1825 224 21.3 Plus
Alh-PK 1385 CG1070-PK 252..930 1137..1825 224 21.3 Plus
Muc68D-PB 1514 CG6004-PB 228..928 1094..1836 223 20.7 Plus
Muc91C-PB 949 CG7709-PB 409..921 1177..1703 221 24.5 Plus
Muc91C-PA 950 CG7709-PA 410..922 1177..1703 221 24.5 Plus
Muc91C-PB 949 CG7709-PB 58..565 1348..1866 216 23.1 Plus
Mur11Da-PD 626 CG32644-PD 204..512 1361..1682 216 24.8 Plus
Muc91C-PA 950 CG7709-PA 116..566 1377..1866 214 24.5 Plus
Nup358-PA 2695 CG11856-PA 1750..1944 944..1123 213 28.6 Plus
Nup358-PB 2718 CG11856-PB 1750..1944 944..1123 213 28.6 Plus
Alh-PL 1332 CG1070-PL 266..957 1153..1825 210 23.3 Plus
Alh-PK 1385 CG1070-PK 319..1010 1153..1825 210 23.3 Plus
Muc4B-PC 496 CG32774-PC 39..412 1357..1731 210 25.1 Plus
Muc4B-PB 496 CG32774-PB 39..412 1357..1731 210 25.1 Plus
Vml-PB 578 CG34333-PB 165..573 1362..1780 209 26.5 Plus
Vml-PA 578 CG34333-PA 165..573 1362..1780 209 26.5 Plus
Mur2B-PB 1144 CG14796-PB 581..1086 1151..1682 209 22.9 Plus
Nup58-PA 546 CG7360-PA 5..283 1403..1711 206 28.6 Plus
Mur29B-PA 555 CG31901-PA 39..476 1393..1824 205 23.4 Plus
Alh-PD 1323 CG1070-PD 215..853 1300..1866 203 21.6 Plus
Alh-PA 1376 CG1070-PA 268..906 1300..1866 203 21.6 Plus
Alh-PD 1323 CG1070-PD 228..1077 1026..1826 202 21.9 Plus
Alh-PA 1376 CG1070-PA 281..1130 1026..1826 202 21.9 Plus
Np-PB 1041 CG34350-PB 140..805 1153..1774 202 22.5 Plus
Np-PA 1041 CG34350-PA 140..805 1153..1774 202 22.5 Plus
Smr-PF 3601 CG4013-PF 1129..1619 1343..1838 200 25 Plus
Smr-PE 3601 CG4013-PE 1129..1619 1343..1838 200 25 Plus
Smr-PD 3601 CG4013-PD 1129..1619 1343..1838 200 25 Plus
Smr-PG 3607 CG4013-PG 1135..1625 1343..1838 200 25 Plus
CG34220-PA 726 CG34220-PA 80..578 1360..1846 198 20.2 Plus
Nup62-PB 394 CG6251-PB 3..210 1268..1494 196 32.5 Plus
Nup62-PA 394 CG6251-PA 3..210 1268..1494 196 32.5 Plus
Muc12Ea-PA 3269 CG32602-PA 2436..3084 1208..1864 195 24.2 Plus
Mur2B-PB 1144 CG14796-PB 460..1055 1187..1827 194 20.7 Plus
Muc12Ea-PA 3269 CG32602-PA 914..1613 1178..1864 194 22.1 Plus
Mur2B-PC 1795 CG14796-PC 460..1055 1187..1827 194 20.7 Plus
Mur2B-PA 1795 CG14796-PA 460..1055 1187..1827 194 20.7 Plus
Muc4B-PC 496 CG32774-PC 100..410 1270..1591 190 24.2 Plus
Muc4B-PB 496 CG32774-PB 100..410 1270..1591 190 24.2 Plus
Muc12Ea-PA 3269 CG32602-PA 1576..2213 1208..1864 190 24.2 Plus
Alh-PL 1332 CG1070-PL 215..862 1300..1866 189 21.3 Plus
Alh-PK 1385 CG1070-PK 268..915 1300..1866 189 21.3 Plus
GlyT-PB 1188 CG5549-PB 658..1173 1151..1699 189 24.1 Plus
Alh-PP 1717 CG1070-PP 250..1392 785..1857 187 21.1 Plus
Muc12Ea-PA 3269 CG32602-PA 725..1371 1208..1872 187 23.8 Plus
Muc12Ea-PA 3269 CG32602-PA 1201..1756 1273..1864 186 25.2 Plus
GlyT-PB 1188 CG5549-PB 755..1186 1171..1644 186 25.5 Plus
Muc12Ea-PA 3269 CG32602-PA 244..892 1208..1864 185 24.1 Plus
GlyT-PB 1188 CG5549-PB 759..1184 1337..1803 185 24.3 Plus
Mur29B-PA 555 CG31901-PA 15..484 1076..1578 184 21.6 Plus
Muc4B-PC 496 CG32774-PC 93..450 1299..1667 183 23.7 Plus
Muc4B-PB 496 CG32774-PB 93..450 1299..1667 183 23.7 Plus
Mur29B-PA 555 CG31901-PA 81..476 1473..1850 182 21 Plus
CG14712-PA 1266 CG14712-PA 477..872 1524..1873 180 24.8 Plus
Muc68D-PB 1514 CG6004-PB 180..1296 459..1569 180 18.8 Plus
Mur11Da-PD 626 CG32644-PD 194..620 1157..1626 180 20.9 Plus
GlyT-PB 1188 CG5549-PB 684..1041 1499..1849 180 27 Plus
Mur2B-PB 1144 CG14796-PB 333..933 1297..1873 178 21.3 Plus
Mur2B-PC 1795 CG14796-PC 333..933 1297..1873 178 21.3 Plus
Mur2B-PA 1795 CG14796-PA 333..933 1297..1873 178 21.3 Plus
Smr-PF 3601 CG4013-PF 1130..1621 1266..1709 176 22.8 Plus
Smr-PE 3601 CG4013-PE 1130..1621 1266..1709 176 22.8 Plus
Smr-PD 3601 CG4013-PD 1130..1621 1266..1709 176 22.8 Plus
Smr-PG 3607 CG4013-PG 1136..1627 1266..1709 176 22.8 Plus
Muc68D-PB 1514 CG6004-PB 161..827 1158..1836 175 19 Plus
CG34220-PA 726 CG34220-PA 78..610 1167..1733 175 18 Plus
Muc12Ea-PA 3269 CG32602-PA 2085..2746 1208..1864 175 23.4 Plus
CG46026-PA 666 CG46026-PA 125..437 1536..1873 174 22.6 Plus
Muc96D-PA 881 CG31439-PA 382..766 1146..1583 173 17.6 Plus
Mur29B-PA 555 CG31901-PA 54..396 1528..1868 170 21.5 Plus
Nup58-PA 546 CG7360-PA 1..195 1652..1881 169 33.8 Plus
Smr-PF 3601 CG4013-PF 1151..1363 1621..1869 169 27.7 Plus
Smr-PE 3601 CG4013-PE 1151..1363 1621..1869 169 27.7 Plus
Smr-PD 3601 CG4013-PD 1151..1363 1621..1869 169 27.7 Plus
Smr-PG 3607 CG4013-PG 1157..1369 1621..1869 169 27.7 Plus
Mur11Da-PD 626 CG32644-PD 200..526 1386..1736 168 24.6 Plus
Muc12Ea-PA 3269 CG32602-PA 2774..3259 1208..1692 168 24.7 Plus
CG34220-PA 726 CG34220-PA 36..448 1419..1846 166 20.4 Plus
Muc91C-PB 949 CG7709-PB 488..907 1154..1576 164 23.4 Plus
Muc91C-PA 950 CG7709-PA 489..908 1154..1576 164 23.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15021-PA 1367 GL15021-PA 35..1078 19..1039 1572 42.7 Plus
Dper\GL15021-PA 1367 GL15021-PA 919..1245 1012..1366 416 37.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:54:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22586-PA 1757 GA22586-PA 35..1165 19..1127 1679 41.9 Plus
Dpse\GA22586-PA 1757 GA22586-PA 1630..1757 1765..1883 333 61.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13448-PA 1827 GM13448-PA 1..1035 1..1035 4274 91.7 Plus
Dsec\GM13448-PA 1827 GM13448-PA 907..1580 1130..1824 1420 71.6 Plus
Dsec\GM17825-PA 2691 GM17825-PA 1751..1936 956..1123 192 30.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Nup153-PA 238 GD24841-PA 1..172 1..173 622 96 Plus
Dsim\GD21193-PA 2664 GD21193-PA 1731..1916 956..1123 197 31.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:54:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14813-PA 1902 GJ14813-PA 70..1170 55..1041 1261 37.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25206-PA 1911 GK25206-PA 63..750 37..703 941 42.2 Plus
Dwil\GK25206-PA 1911 GK25206-PA 828..1214 736..1092 600 37.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:54:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17279-PA 1932 GE17279-PA 1..1932 1..1883 5850 76.6 Plus

LD46479.hyp Sequence

Translation from 832 to 6483

> LD46479.hyp
MEDAQEQRESSQAELAKKHPLTPLKELPEESEEEEEEEDESSAGALRESD
SNNSIMGKMKMRVSSILPASLSGWFSPSSKDGNDALSSPANLRQSQPRQS
NGRLTTKRKRGRRRIMLAEVDADAADDLDDGSDAKGLNYEEVALADNIAE
HDLAAEDEQTRRSEYNVFLLRKRAGAVAAAGGDEDEAEEDELEEDDEDGD
EEDDDEEQENLQQSAAVQTKRRRLELETPVNLPNMRRLPLLSSTPAAPLA
AATSSSSSQMYKGVSHIAPHRRNHLNLYGSQRQREPAYNFFTGNEAAEGS
TGDLPHSIRRSLNIPFGGSSTATSYNNSLSSLPNHKRPSLIGKQTHRRDL
TMDETGTGPAMSSEEHLNHLLRISRTNNNTSNNNNNNNNNNNVIETKTRR
SELSAAAGGCGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSNLEFYGNLQ
SSKSIFNRSNTAAQQSHRNSTWSLNSLTQRRRFNASIYGSTSALSDSRLL
SGSASNSGSASASSSPFYQGRTTFGGNSGNNRLFSRSNLSSSAASSMLGL
NSAGSSPAHQLHASMTGGIGYGMKAVDMRPSDSGSLAETSVGQGGSKKPG
TGLSNTTMRILNLLESYSTPLIDAKRMGSSIKEHQSSRQQRQGTPATPYL
RSTSASRNVSVPNHINELAELRSNKLLVPTMQQLLERRRLHRVTQNSRDV
VHSQNVRAGGENNQEKPKPTAPYVAPIDQSANHTQHTNKMRSRLSHQTRN
KETRTAEEEAPPPLDLPQISFPDMASAPKFDLIIKPTVPVVSKPSTTDPI
QSSKSSNTNLSTTNSKQMPNFLANPQPAAPIVNFAANGNVSAISKPSKRT
FTFSEPTPLSNFQENCIPKPKINRKYTFSAPAPLDDLRITNKQSQPTING
TPSSKEWECDTCMVRNKPEINKCVACETAKPVASAAPVQAPLPPSTAAID
TQSFVGFGDRFKKSTTAWECDACMLSNKAEASKCIACETPRKTVAPKVNN
FSPLITNAKSNEWECSVCLVRNKVEVSKCVACESAKPGATMALPATSNIA
VATPSIITDGFGDRFKKSATAWECDACMLSNKAEASKCIACETPRKSSTP
IANSSYPSINNNLPAGSGFDISFTRKANMWECQTCLVMNKSSDEECIACQ
TPNSQARNSNSESALISSISSSSASFSGSLSRPSSRSSSGSTSTCGSVCS
GSIVSISSTTESAKALSAKKVPPKPDAGFQQLVAAQKTSTWECEACLAKN
DMSRKTCICCEQMMPEAFNPAATTANSAASSVPKFRFGFSHVKEVVKPSV
ETTTTPAPTSAQFSFGFGQSNQGKDVADSKKTEAPKTFMFGVSKVEEPKT
VSFGTGIKETTATSSTEATAPTPAAAAPAPVQFVFKAPTTATTASSLTTT
ISTTSNAPALGGFSFGAPSSSSTVSSSTTSTSANPAAVKPMFSWSGAGSA
VSSTSSSQQPVAKAPTLGFGVSSSTVTTTTTSTKVFAFTPASGLDPAAAT
SAPAAGAGFSFGSQSKPATTQNTGTFFFGQPTAVAPATPTNPSVSSIFGA
PATSTTASTSVSATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFG
ASSGSGTTTTPSFGWSSNGDAAKSNSAAVGSAAVPSSSASTMATPIFGSS
SMFGPSSSSNNTTSTSTTSLPFGSAATTAATTPAGGNAALTGLFGNVGNS
LAGVGAPVATTPAATAAAPLTNIFGNPTPVAAAAPVFGSGSTIPSAGFGA
PAAAAPLAAPALPGAFNFGGATAATPAASSAPFVFGSSTNEPLAKPSFNF
TGSAASSTAPAPAFNFTANTAATNNPSGGDSTPNANALFQFSATSTAPAN
IFAFNPPAAGNSAQSSQTARRKIRAPVRRLPPR*

LD46479.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:01:25
Subject Length Description Subject Range Query Range Score Percent Strand
Nup153-PC 1883 CG4453-PC 1..1883 1..1883 9616 100 Plus
Nup153-PA 1883 CG4453-PA 1..1883 1..1883 9616 100 Plus
Nup153-PD 1929 CG4453-PD 1..1929 1..1883 9559 97.6 Plus
CG14712-PA 1266 CG14712-PA 505..1114 1292..1866 365 27.5 Plus
CG14712-PA 1266 CG14712-PA 513..1221 1204..1858 349 25.6 Plus
Muc91C-PB 949 CG7709-PB 305..908 1270..1863 327 25.2 Plus
CG14712-PA 1266 CG14712-PA 592..1248 1130..1783 290 25.6 Plus
CG14712-PA 1266 CG14712-PA 253..1217 632..1588 242 22 Plus
CG14712-PA 1266 CG14712-PA 477..872 1524..1873 180 24.8 Plus