BDGP Sequence Production Resources |
Search the DGRC for LD46483
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 464 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | Hmg-2-RA |
Protein status: | LD46483.pep: gold |
Preliminary Size: | 1449 |
Sequenced Size: | 1349 |
Gene | Date | Evidence |
---|---|---|
CG9418 | 2001-09-19 | Blastp of sequenced clone |
CG9418 | 2008-04-29 | Release 5.5 accounting |
CG9418 | 2008-08-15 | Release 5.9 accounting |
CG9418 | 2008-12-18 | 5.12 accounting |
1349 bp (1349 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058722
> LD46483.complete TTTTGCTTACGAACCACATACCTGTGATTTTGCAGAAAGATAAACAATTT TTAAATGCAATAGAGTGTACGGTTAAACAGAAATGACGGAACCAACGAGC AAGACACCGGATGCGGTTCCGGAATCACCCGTATCACTGCCCATCGCCTC CCAATCCATGGATACGGCGACCATTGAAGATTTCGACGAGGACAAACCGG CCAAGGGAAAGAAGAAAGCCAAGAATCCAAAGGGTCGCCACTCGGATTCC GACATCGGCTCCGAACTGAAGAAGCTGGCCCAGCGCCGGATCAACGTAGC CGGTGCTCCAAAAATGCCACTTAATGGCTACGTCCGCTTCATGAACGATC GACGCGAGGAACTGCGACGGGAGCAGCCACAACGTACTGCCCTGGAGCAC ACAAGGATCATCGGCGAGGAGTGGCATCAGCTGCCCGAGGAGCGCAAGTT GCCCTACATCGAGGCAGCCGCCAAGGACAAGGCCATATATCAGGAGCAGT TGCAAATGTTTCTCAAGGAACACCCCGAAATTGTGGCCAACGAGTTGGCC AAAGCCAAGAAAGCCACAAAACTGGATGGTTCGCCCAAGGAAAAGACGCC GAAGGGTGAATCAGCCTTGGGCAAGGCGAAGAAGACCAAGGCAAAGCCGG TTAAGCGGCAGAGCGAGGATCCGGATGATGTGCCTCTGGCCAAGGTGAAG CGTGCCCAGACACCACCGCCTCCCACACCGCCAGCGGCTCCAGTACAGCC CCCTCCCAGCAGCGTGCCACCTGCGACACCTGCACCACGACCGCTGCAGC CCGGCGAGATACCCATCTACACCAACGAGTTCATCGAACACAATCGCAGC ACGGAGAATGAGCTGAGGACGCTGCGCAAGGCCAAGACCGATCTGGAGCA GCAGAACGCTGTGCTGGAACAGCACGTAGATAATACGAAAGCCGGGTACG CCAAGGTGATGGGCGAGGTAACTGAGCTCATGGAGGAGAACCAACGCCTG GAGACCTATTTGCGCGCCTTGCGCCAGAAACTGGTCGCAGCTCTCGGCGG AATCTCGATGCCACCACTGGAGCCAAGTGGTCCCAGCGTTGGCAACATTG ACAAGTACATCCGGCACTTAGCCGGGCTCGTCACTCAGCCAAGCAACGTC ACTTTGATTAAGGCACGAGAGGCGCTGCGTAAAGTGGACACCAGTAGCTT GCTAAAACCGTGATTCATAGTACAGTATTCATAGCGTTAATAACTTCACC ATAAACAATAGTCATAGTCATAGAACAATAGTTATCAATGCCAAGGATAT CAAAAGAGAAAACCGAATAACAATAAAATATAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17032675..17033160 | 1..486 | 97 | -> | Plus |
chr2R | 17033220..17034063 | 487..1331 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 1..1131 | 83..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 1..1131 | 83..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 1..1131 | 83..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 1..1131 | 83..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmg-2-RA | 1..1131 | 83..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 12..1342 | 1..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 12..1342 | 1..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 17..1347 | 1..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9418-RA | 12..1342 | 1..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hmg-2-RA | 17..1347 | 1..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21146219..21146704 | 1..486 | 100 | -> | Plus |
2R | 21146764..21147608 | 487..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21146219..21146704 | 1..486 | 100 | -> | Plus |
2R | 21146764..21147608 | 487..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21146219..21146704 | 1..486 | 100 | -> | Plus |
2R | 21146764..21147608 | 487..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17033724..17034209 | 1..486 | 100 | -> | Plus |
arm_2R | 17034269..17035113 | 487..1331 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21147418..21147903 | 1..486 | 100 | -> | Plus |
2R | 21147963..21148807 | 487..1331 | 100 | Plus |
Translation from 82 to 1212
> LD46483.pep MTEPTSKTPDAVPESPVSLPIASQSMDTATIEDFDEDKPAKGKKKAKNPK GRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQ RTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLKEHPEI VANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDDV PLAKVKRAQTPPPPTPPAAPVQPPPSSVPPATPAPRPLQPGEIPIYTNEF IEHNRSTENELRTLRKAKTDLEQQNAVLEQHVDNTKAGYAKVMGEVTELM EENQRLETYLRALRQKLVAALGGISMPPLEPSGPSVGNIDKYIRHLAGLV TQPSNVTLIKAREALRKVDTSSLLKP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11938-PA | 374 | GF11938-PA | 1..374 | 1..376 | 1251 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22094-PA | 373 | GG22094-PA | 1..373 | 1..376 | 1614 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20725-PA | 413 | GH20725-PA | 70..412 | 51..376 | 1010 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hmg-2-PA | 376 | CG9418-PA | 1..376 | 1..376 | 1931 | 100 | Plus |
Ssrp-PA | 723 | CG4817-PA | 482..703 | 3..214 | 161 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20809-PA | 388 | GI20809-PA | 44..388 | 56..376 | 1014 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10158-PA | 340 | GL10158-PA | 1..339 | 1..375 | 1112 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21773-PA | 396 | GA21773-PA | 1..395 | 1..375 | 1184 | 65.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15811-PA | 376 | GM15811-PA | 1..376 | 1..376 | 1896 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11569-PA | 376 | GD11569-PA | 1..376 | 1..376 | 1899 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20542-PA | 397 | GJ20542-PA | 13..397 | 8..376 | 1005 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19656-PA | 387 | GK19656-PA | 77..383 | 52..369 | 1059 | 68.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12173-PA | 373 | GE12173-PA | 1..373 | 1..376 | 1571 | 89.1 | Plus |
Translation from 82 to 1212
> LD46483.hyp MTEPTSKTPDAVPESPVSLPIASQSMDTATIEDFDEDKPAKGKKKAKNPK GRHSDSDIGSELKKLAQRRINVAGAPKMPLNGYVRFMNDRREELRREQPQ RTALEHTRIIGEEWHQLPEERKLPYIEAAAKDKAIYQEQLQMFLKEHPEI VANELAKAKKATKLDGSPKEKTPKGESALGKAKKTKAKPVKRQSEDPDDV PLAKVKRAQTPPPPTPPAAPVQPPPSSVPPATPAPRPLQPGEIPIYTNEF IEHNRSTENELRTLRKAKTDLEQQNAVLEQHVDNTKAGYAKVMGEVTELM EENQRLETYLRALRQKLVAALGGISMPPLEPSGPSVGNIDKYIRHLAGLV TQPSNVTLIKAREALRKVDTSSLLKP*