BDGP Sequence Production Resources |
Search the DGRC for LD46530
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 465 |
Well: | 30 |
Vector: | pOT2 |
Associated Gene/Transcript | HIP-RA |
Protein status: | LD46530.pep: gold |
Preliminary Size: | 2050 |
Sequenced Size: | 2091 |
Gene | Date | Evidence |
---|---|---|
CG2947 | 2001-07-04 | Blastp of sequenced clone |
CG2947 | 2008-04-29 | Release 5.5 accounting |
CG2947 | 2008-08-15 | Release 5.9 accounting |
CG2947 | 2008-12-18 | 5.12 accounting |
2091 bp (2091 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051998
> LD46530.complete CAAAAGTGGACGTAAAGCTAAGCAAATATTGCTTATTAATAATATTAATA TATTAATATATCAGATCTGAAAACATCGAGACAAAACGGAATTCAGAAAT GGCTTTCACAATGCAAACCGGGGATCTGAAGAAGCTGAAGTACTTCATCG ACTTTGCGCTTGAGAATCCCACCTTCTTGAACATGCCGCAGCTGCAGTTC GTCAAAGATTTCGTGGAGAAGTTTGGTGGCACGGTGCCGCCTGGCCAATT CAACGGTGGCAGCGCCGGAGGCAAGTGCCCATTCGGCGGTGTTGCTGGTG CCAAGGCCAACGAGCCGGCCAATGCCCCCGAGGATAGCGAGGACGAAAAG TCCCTCTCCGATCCTGAGTCGGACGTGGAGCTGGACATGGAGGGTGTGAT CGAGGCGGACAGCGACCCCGCCCAACCCATGGGCAACTACAGCAAGAAGG CCACCGAAGAGGAGGTGGAGCAGGCGAGCGAGCTGCGCGCCCAGGCGGCC TCCGCTTACGGCCAGCAGAAGTTCGACGAGGCCATCGCCTTGTACACCAA GGCCATTGAACTGAGCCCGGGTAATGCCCTTTTCCACGCTAAGCGTGGTC AGGCCTTCCTCAAGCTGAAGAAGCCGAATGCCTGCATTCGGGACTGCGAC GTGGCGCTGGAACTCAACTCGGATTTGGCGGCTGGCTACAAGTTCAGGGG ACGCGCCCGTCGCCTCCTCGGAGATTTTGAGCTGGCTGCCCATGATTTGC GCCAAGCATGCAAGCTGGACTTTGACGAGGAGACAGACGAGTGGCTAAAG GAGGTCACTCCGAATGCCAAGAAAATCGAGCAGCATCGCTTGAAGCAGGA GCGTCGCCAGGCAGAGCGTAAGATCAAGGAACGCCAGCGGGATCAGAGGC GCGCACGTAAGGAGCAGGAAAAGCACAATGCCAGCTCTGGTGGATCATCT GGAGAATTTTCCGGTGGGAATCCTGGTAACGGAAATATGTCTGATATACT GGGCGCCATGTCAGATCCCGAGGTGTCAGCCGCCATTCAGGACATTTTGT CAAATCCGGGTAACATCACAAAGTACGCGTCGAACCCGAAGATATACAAC CTTATCAAGAAGATTGTGCCCGGTGGAGATGTGGGTGCTGCCTTTGGCCA AGCGGGTGAAAAGGCTGGAAAGCCGAGCGAGCCTAAGCCTAAAAAGGACT CCGCCGACTTCGTCGATGACGGTTTGGACTAAGGTTTAGAAATGGGGCAG TAGTAAGACTGAAACATGCGTCGATAAAAAGAAGTTAACAACCAATTACA CGAAATCGAGCGAGATTACAAAACAACAAAGAAAGAGAAAGCAACAGAGT GCGGTGAAGAAGATGGACTACACGAAAAACAAAAGGGAAAGCGGCTGCCT TACACATTTTTGCAGCTGAGAAAAAACAAACATTTCCTAAGCTTTAACTT AACCAACACGTAAAAGAACGGGCGACAATGGAGAAAATTCAAATATTCAA AATACTACAAGCAGTCAGAAGAATAAGCAACATTTATTTAAATCGAGAAG AAAGAGATGTTGGAGATGCTGGAGACGCTTCTTCACATATTATTGAAAAG CATACTTGCGGCCATTAAAGTGGCAAATGAAACTATACAAAGGAGCTAGA ATATGCTTAAAAACTTATCACATTTGCAGTTCACAGGTAAATCAAAAGAT TGTCCTGTGACGAACAAAACATAAATGTTTAGACGTCAAGTCAGATTCAA GGGTGCCGATCGATCTAGTTGAACTAAAGCTCGAGAAACAACCAAAAGAA AATAAAAAATATATATATGTTCAATAATATTAGCCTAAATTACCGAGAAC GAAGAAACGGATAAAACTAATCGCATCATTTGGTCAAACAAAATTGTACT GAGTAGGATTTAAATCATATTGTAAGCAAATGCATTTAGCCCCCCAACAT GAAAGCAATCGCCCATTCATTCACACACTCATTCACACACTCATTCAACC AGTGATCAATGGAAATAAATAAACGAATCAACAAGAACCCGAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2947-RB | 2139 | CG2947-RB | 98..2139 | 1..2042 | 10210 | 100 | Plus |
CG32789-RA | 2096 | CG32789-RA | 61..1996 | 60..1997 | 9485 | 99.3 | Plus |
CG32789.a | 2473 | CG32789.a | 61..1996 | 60..1997 | 9485 | 99.3 | Plus |
CG32789-RA | 2096 | CG32789-RA | 1978..2054 | 1967..2043 | 385 | 100 | Plus |
CG32789.a | 2473 | CG32789.a | 1978..2054 | 1967..2043 | 385 | 100 | Plus |
CG32789-RA | 2096 | CG32789-RA | 24..55 | 1..32 | 160 | 100 | Plus |
CG32789.a | 2473 | CG32789.a | 24..55 | 1..32 | 160 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 3684871..3685873 | 1039..2041 | 5015 | 100 | Plus |
chrX | 22417052 | chrX | 3693954..3694966 | 1039..2041 | 4660 | 97.7 | Plus |
chrX | 22417052 | chrX | 3684151..3684799 | 393..1041 | 3245 | 100 | Plus |
chrX | 22417052 | chrX | 3693234..3693882 | 393..1041 | 3245 | 100 | Plus |
chrX | 22417052 | chrX | 3683462..3683732 | 1..271 | 1355 | 100 | Plus |
chrX | 22417052 | chrX | 3692604..3692815 | 60..271 | 1045 | 99.5 | Plus |
chrU | 10048995 | chrU | 6014921..6015132 | 271..60 | 1045 | 99.5 | Minus |
chrX | 22417052 | chrX | 3683812..3683937 | 271..396 | 630 | 100 | Plus |
chrX | 22417052 | chrX | 3692895..3693020 | 271..396 | 630 | 100 | Plus |
chrU | 10048995 | chrU | 6014716..6014841 | 396..271 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR42197-RA | 406 | CR42197-RA | 30..366 | 60..396 | 1670 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 3791475..3792479 | 1039..2043 | 5025 | 100 | Plus |
X | 23542271 | X | 3800558..3801572 | 1039..2043 | 4670 | 97.7 | Plus |
X | 23542271 | X | 3790755..3791403 | 393..1041 | 3245 | 100 | Plus |
X | 23542271 | X | 3799838..3800486 | 393..1041 | 3245 | 100 | Plus |
X | 23542271 | X | 3790066..3790336 | 1..271 | 1355 | 100 | Plus |
X | 23542271 | X | 3799208..3799419 | 60..271 | 1045 | 99.5 | Plus |
X | 23542271 | X | 3799499..3799624 | 271..396 | 630 | 100 | Plus |
X | 23542271 | X | 3790416..3790541 | 271..396 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 3799573..3800577 | 1039..2043 | 5025 | 100 | Plus |
X | 23527363 | X | 3808656..3809612 | 1039..1997 | 4605 | 98.8 | Plus |
X | 23527363 | X | 3807936..3808584 | 393..1041 | 3245 | 100 | Plus |
X | 23527363 | X | 3798853..3799501 | 393..1041 | 3245 | 100 | Plus |
X | 23527363 | X | 3798164..3798434 | 1..271 | 1355 | 100 | Plus |
X | 23527363 | X | 3807306..3807517 | 60..271 | 1045 | 99.5 | Plus |
X | 23527363 | X | 3807597..3807722 | 271..396 | 630 | 100 | Plus |
X | 23527363 | X | 3798514..3798639 | 271..396 | 630 | 100 | Plus |
X | 23527363 | X | 3809594..3809670 | 1967..2043 | 385 | 100 | Plus |
X | 23527363 | X | 3807269..3807300 | 1..32 | 160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 3683813..3683934 | 272..393 | 100 | -> | Plus |
chrX | 3684152..3684798 | 394..1040 | 100 | -> | Plus |
chrX | 3684873..3685873 | 1041..2041 | 95 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2947-RB | 1..1134 | 99..1232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-R-RB | 1..1134 | 99..1232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-R-RA | 1..1134 | 99..1232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2947-RB | 1..1134 | 99..1232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-R-RA | 1..1134 | 99..1232 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR42197-RA | 30..366 | 60..396 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2947-RB | 30..2070 | 1..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-R-RB | 30..2070 | 1..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-R-RB | 25..2065 | 1..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2947-RB | 30..2070 | 1..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-R-RB | 25..2065 | 1..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3790066..3790336 | 1..271 | 100 | -> | Plus |
X | 3790417..3790538 | 272..393 | 100 | -> | Plus |
X | 3790756..3791402 | 394..1040 | 100 | -> | Plus |
X | 3791477..3792477 | 1041..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3790066..3790336 | 1..271 | 100 | -> | Plus |
X | 3790417..3790538 | 272..393 | 100 | -> | Plus |
X | 3790756..3791402 | 394..1040 | 100 | -> | Plus |
X | 3791477..3792477 | 1041..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3790066..3790336 | 1..271 | 100 | -> | Plus |
X | 3790417..3790538 | 272..393 | 100 | -> | Plus |
X | 3790756..3791402 | 394..1040 | 100 | -> | Plus |
X | 3791477..3792477 | 1041..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 3684099..3684369 | 1..271 | 100 | -> | Plus |
arm_X | 3684450..3684571 | 272..393 | 100 | -> | Plus |
arm_X | 3684789..3685435 | 394..1040 | 100 | -> | Plus |
arm_X | 3685510..3686510 | 1041..2041 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3798515..3798636 | 272..393 | 100 | -> | Plus |
X | 3798164..3798434 | 1..271 | 100 | -> | Plus |
X | 3798854..3799500 | 394..1040 | 100 | -> | Plus |
X | 3799575..3800575 | 1041..2041 | 100 | Plus |
Translation from 98 to 1231
> LD46530.hyp MAFTMQTGDLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQ FNGGSAGGKCPFGGVAGAKANEPANAPEDSEDEKSLSDPESDVELDMEGV IEADSDPAQPMGNYSKKATEEEVEQASELRAQAASAYGQQKFDEAIALYT KAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAAGYKFR GRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQ ERRQAERKIKERQRDQRRARKEQEKHNASSGGSSGEFSGGNPGNGNMSDI LGAMSDPEVSAAIQDILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFG QAGEKAGKPSEPKPKKDSADFVDDGLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HIP-R-PD | 377 | CG2947-PD | 1..377 | 1..377 | 1955 | 100 | Plus |
HIP-R-PB | 377 | CG2947-PB | 1..377 | 1..377 | 1955 | 100 | Plus |
HIP-R-PA | 377 | CG2947-PA | 1..377 | 1..377 | 1955 | 100 | Plus |
HIP-PA | 377 | CG32789-PA | 1..377 | 1..377 | 1955 | 100 | Plus |
Translation from 98 to 1231
> LD46530.pep MAFTMQTGDLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQ FNGGSAGGKCPFGGVAGAKANEPANAPEDSEDEKSLSDPESDVELDMEGV IEADSDPAQPMGNYSKKATEEEVEQASELRAQAASAYGQQKFDEAIALYT KAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAAGYKFR GRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQ ERRQAERKIKERQRDQRRARKEQEKHNASSGGSSGEFSGGNPGNGNMSDI LGAMSDPEVSAAIQDILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFG QAGEKAGKPSEPKPKKDSADFVDDGLD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19147-PA | 386 | GF19147-PA | 1..386 | 1..377 | 1249 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18670-PA | 388 | GG18670-PA | 1..388 | 1..377 | 1514 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24750-PA | 394 | GH24750-PA | 1..394 | 1..377 | 1164 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HIP-R-PD | 377 | CG2947-PD | 1..377 | 1..377 | 1955 | 100 | Plus |
HIP-R-PB | 377 | CG2947-PB | 1..377 | 1..377 | 1955 | 100 | Plus |
HIP-R-PA | 377 | CG2947-PA | 1..377 | 1..377 | 1955 | 100 | Plus |
HIP-PA | 377 | CG32789-PA | 1..377 | 1..377 | 1955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14722-PA | 411 | GI14722-PA | 1..411 | 1..377 | 1218 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16565-PA | 425 | GL16565-PA | 1..425 | 1..377 | 1192 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15538-PA | 427 | GA15538-PA | 1..427 | 1..377 | 1199 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12305-PA | 377 | GM12305-PA | 1..377 | 1..377 | 1852 | 95.2 | Plus |
Dsec\GM18717-PA | 270 | GM18717-PA | 1..270 | 1..270 | 1376 | 95.9 | Plus |
Dsec\GM18718-PA | 101 | GM18718-PA | 11..101 | 287..377 | 425 | 92.3 | Plus |
Dsec\GM18427-PA | 289 | GM18427-PA | 16..111 | 128..223 | 147 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16651-PA | 377 | GD16651-PA | 1..377 | 1..377 | 1796 | 93.1 | Plus |
Dsim\CHIP-PA | 289 | GD23704-PA | 16..111 | 128..223 | 147 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19436-PA | 424 | GJ19436-PA | 1..424 | 1..377 | 1223 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10216-PA | 394 | GK10216-PA | 1..394 | 1..377 | 1223 | 65.6 | Plus |
Dwil\GK15258-PA | 289 | GK15258-PA | 16..108 | 128..220 | 148 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16311-PA | 387 | GE16311-PA | 1..387 | 1..377 | 1476 | 79.6 | Plus |