BDGP Sequence Production Resources |
Search the DGRC for LD46538
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 465 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | Naa60-RA |
Protein status: | LD46538.pep: gold |
Preliminary Size: | 2407 |
Sequenced Size: | 2278 |
Gene | Date | Evidence |
---|---|---|
CG18177 | 2001-01-01 | Release 2 assignment |
CG18177 | 2001-07-04 | Blastp of sequenced clone |
CG18177 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18177 | 2008-04-29 | Release 5.5 accounting |
CG18177 | 2008-08-15 | Release 5.9 accounting |
CG18177 | 2008-12-18 | 5.12 accounting |
2278 bp (2278 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060437
> LD46538.complete TACTGCTGATTTGTTTTCATTAATTCTTTTTGGCTTGGCGAATAAATTAG GACAAATGAGGCATCATCGCGGGCCAACTGAATTGTGACCAGCGGGCAGC AGCAGCGGCATGCGACACCGACACCATCAGCGCATCAGCACCACCTGGCC AGCGTTGTAAGGGATTCTCCCACCCTCCCCAAAGAGCCAACGATTCCACT TGAGACCCAAAAGTCCCAGTTTAAAACCAAAATCAAAATCAGCGGAGCAC CCGCACACCAGCGAGAGCAAGTGGTTTCTACATGATCCGGCGACACGCTG CCCCCCTCTCCGTGCTGCATGCTCCATGCTCCAGCTCAATGTAAATGTTA ATTAAAGCCAATTGAGCGCACACCCAAAAACACGCACCAAACTGAAAACG AATACGAATACGAATCACTCACCCGGAGGAGAAGGCTCCGTTGGACAAGA TTTCGCGCTTAACCTGTACAGGCGACAACGGCGGTGGCGGTGGTGCTGCA ATAAATGGACATAATTGCTCTAATTGGACAGAGCAGCAGCAGACGCAGTG GCAGTGGCAGTGGGAACGGAGGAGCACCAGCACCAGCACCATCAGCAGCA GCAGCACCCCCCCTTGCAATAGGATGGCACAATTCACACTCTACAACAAA CACAGTGCGCCGCCCAGTAGCGAGAGTACGCGTGTGGACTGCGAACACGT ACCGCTGTGCTCGATTAACGATGTGCAGCTAAGGTTCCTGGTGCCCGACG ATCTGACGGAGGTGCGACAGCTGTGCCAAGAATGGTTTCCAATCGACTAT CCACTATCATGGTATGAGGATATTACCTCAAGCACGCGCTTCTTTGCGCT GGCAGCTGTATATAATCTGGCCATAATTGGTTTAATCGTTGCCGAAATCA AACCCTATCGAAATGTGAACAAGGAGGTAATAGCCAATATGAGTGATAGT GATGAGTTGTACACCAGGCTGAGCGGTTTTCCCATGCAGGACAAGGGCAT CCTGCCGGACTCGATGGGTCGTTCCGCCGATGTCGGTTATATACTGTCGC TGGGCGTCCATCGTTCGCATCGACGCAATGGCATCGGATCGCTGCTGTTG GACGCGCTAATGAACCACCTGACGACGGCCGAGCGGCATTCGGTGAAGGC GATCTTCCTGCACACGCTGACCACCAATCAACCTGCCATATTTTTCTACG AGAAGAGAAGATTTACGCTTCACTCATTCCTGCCCTACTACTACAATATA CGGGGCAAGGGCAAGGACGGATTCACCTATGTGAACTACATTAACGGCGG CCATCCACCCTGGACTTTATTAGATCACATCAAGCACTACGCGTCGATGG TGCGCCACACCAGCAGCCTTTGCGCCTGGCTGGCCGGACGAGTCCAGCAG GTGGTGCGGTGGTTCTACCACAAGCTGCTCACTCGCTTCAACTTTATCGA GTGAATCTCGACGGCGCAGCACAAGCACTGGCCAGGCATATACACGCATC CTTCCTAGACACACGAGCACTTTGAGGGCGATGATGAGTGTGTCCGCCGC ATTATGTCATCCCGTCGAGCATAAACAGAAACAGAAACACAAACAAACAC AAACATTTATATGTACTATGGCACCCAATCACCACCACAGACAGACACAC CTTCATTATAAATGTTAGGCAACACCTCCGCAGAATCATTACGTTTTTAT ACGGAAGCTAATAGAGAAGATGTGAGACGAGAAGGAGAAGGAGAAGAAGA TCTAGCAAAGAACAACATCAAAGGCATAAGTTGAAAGTTGTAACATAGTT CGCTAAGTGTATTATTACGTTTTAAAAGATATCTATCTGTTCACTACTGC TGTAAATAGTCTTATGATGTTTTGTTTGAATCGAGCTGTAACCGAGTGAT TTGGAATTAGCATAGCCCCCTTATCTTTTGAATGTAGCCCGTGTGTATGT TTTTCCTAAGTTTTAAGTTCCACGCACAAGACAGTCATTTAGTTTAGCGA AGACAAACAACAAAGATGCTCATGCTTTAATGCTTAATTTATGAAATCTG CACGTAAATAGCTTTGAACTGAGAATGGCAAGAATATCTATCCAGTTGAA TACCCGAACCAACCATTTAAATTCAAATCCCGTTCGCTGTTTCTATAGTA TTTTGTAAAAGTATTTTAATGCATATTGTTTCGCAGCTAAATCTGATTAC TTTAGGCACAATTTATCTAGCAAATTGTAATATTTTTTAAAATAAAAACT TGTAAAGTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18177-RA | 2285 | CG18177-RA | 27..2285 | 1..2259 | 11295 | 100 | Plus |
CG18177-RB | 2222 | CG18177-RB | 951..2222 | 988..2259 | 6360 | 100 | Plus |
CG18177-RB | 2222 | CG18177-RB | 27..953 | 1..927 | 4635 | 100 | Plus |
CG18177.a | 1424 | CG18177.a | 27..788 | 1..762 | 3810 | 100 | Plus |
CG18177.a | 1424 | CG18177.a | 786..1424 | 988..1626 | 3195 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9720567..9721504 | 1322..2259 | 4690 | 100 | Plus |
chr3L | 24539361 | chr3L | 9718784..9719423 | 1..640 | 3155 | 99.5 | Plus |
chr3L | 24539361 | chr3L | 9719837..9720287 | 760..1210 | 2255 | 100 | Plus |
chr3L | 24539361 | chr3L | 9719641..9719764 | 641..764 | 620 | 100 | Plus |
chr3L | 24539361 | chr3L | 9720356..9720473 | 1209..1326 | 575 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9728713..9729651 | 1322..2260 | 4695 | 100 | Plus |
3L | 28110227 | 3L | 9726930..9727569 | 1..640 | 3200 | 100 | Plus |
3L | 28110227 | 3L | 9727983..9728433 | 760..1210 | 2255 | 100 | Plus |
3L | 28110227 | 3L | 9727787..9727909 | 641..763 | 615 | 100 | Plus |
3L | 28110227 | 3L | 9728502..9728619 | 1209..1326 | 575 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 9721813..9722751 | 1322..2260 | 4695 | 100 | Plus |
3L | 28103327 | 3L | 9720030..9720669 | 1..640 | 3200 | 100 | Plus |
3L | 28103327 | 3L | 9721083..9721533 | 760..1210 | 2255 | 100 | Plus |
3L | 28103327 | 3L | 9720887..9721009 | 641..763 | 615 | 100 | Plus |
3L | 28103327 | 3L | 9721602..9721719 | 1209..1326 | 575 | 99.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9718784..9719314 | 1..531 | 99 | == | Plus |
chr3L | 9719390..9719423 | 607..640 | 100 | -> | Plus |
chr3L | 9719641..9719761 | 641..761 | 100 | -> | Plus |
chr3L | 9719839..9720287 | 762..1210 | 100 | -> | Plus |
chr3L | 9720358..9720470 | 1211..1323 | 99 | -> | Plus |
chr3L | 9720569..9721471 | 1324..2226 | 96 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RA | 1..831 | 624..1454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RA | 1..831 | 624..1454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RA | 1..831 | 624..1454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RA | 1..831 | 624..1454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RA | 1..831 | 624..1454 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RA | 1..2259 | 1..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RA | 27..2285 | 1..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RA | 36..2294 | 1..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18177-RA | 1..2259 | 1..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naa60-RA | 36..2294 | 1..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9726930..9727569 | 1..640 | 100 | -> | Plus |
3L | 9727787..9727907 | 641..761 | 100 | -> | Plus |
3L | 9727985..9728433 | 762..1210 | 100 | -> | Plus |
3L | 9728504..9728616 | 1211..1323 | 99 | -> | Plus |
3L | 9728715..9729650 | 1324..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9726930..9727569 | 1..640 | 100 | -> | Plus |
3L | 9727787..9727907 | 641..761 | 100 | -> | Plus |
3L | 9727985..9728433 | 762..1210 | 100 | -> | Plus |
3L | 9728504..9728616 | 1211..1323 | 99 | -> | Plus |
3L | 9728715..9729650 | 1324..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9726930..9727569 | 1..640 | 100 | -> | Plus |
3L | 9727787..9727907 | 641..761 | 100 | -> | Plus |
3L | 9727985..9728433 | 762..1210 | 100 | -> | Plus |
3L | 9728504..9728616 | 1211..1323 | 99 | -> | Plus |
3L | 9728715..9729650 | 1324..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9720030..9720669 | 1..640 | 100 | -> | Plus |
arm_3L | 9720887..9721007 | 641..761 | 100 | -> | Plus |
arm_3L | 9721085..9721533 | 762..1210 | 100 | -> | Plus |
arm_3L | 9721604..9721716 | 1211..1323 | 99 | -> | Plus |
arm_3L | 9721815..9722750 | 1324..2259 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9720030..9720669 | 1..640 | 100 | -> | Plus |
3L | 9720887..9721007 | 641..761 | 100 | -> | Plus |
3L | 9721085..9721533 | 762..1210 | 100 | -> | Plus |
3L | 9721604..9721716 | 1211..1323 | 99 | -> | Plus |
3L | 9721815..9722750 | 1324..2259 | 100 | Plus |
Translation from 623 to 1453
> LD46538.pep MAQFTLYNKHSAPPSSESTRVDCEHVPLCSINDVQLRFLVPDDLTEVRQL CQEWFPIDYPLSWYEDITSSTRFFALAAVYNLAIIGLIVAEIKPYRNVNK EVIANMSDSDELYTRLSGFPMQDKGILPDSMGRSADVGYILSLGVHRSHR RNGIGSLLLDALMNHLTTAERHSVKAIFLHTLTTNQPAIFFYEKRRFTLH SFLPYYYNIRGKGKDGFTYVNYINGGHPPWTLLDHIKHYASMVRHTSSLC AWLAGRVQQVVRWFYHKLLTRFNFIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24673-PA | 254 | GF24673-PA | 1..254 | 1..276 | 1308 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15408-PA | 255 | GG15408-PA | 1..255 | 1..276 | 1327 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15428-PA | 258 | GH15428-PA | 1..258 | 1..276 | 1225 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Naa60-PA | 276 | CG18177-PA | 1..276 | 1..276 | 1476 | 100 | Plus |
Naa60-PB | 255 | CG18177-PB | 1..255 | 1..276 | 1338 | 92.4 | Plus |
Naa60-PC | 239 | CG18177-PC | 1..218 | 1..239 | 1102 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13029-PA | 258 | GI13029-PA | 1..258 | 1..276 | 1233 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16291-PA | 255 | GL16291-PA | 1..255 | 1..276 | 1286 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23434-PA | 255 | GA23434-PA | 1..255 | 1..276 | 1286 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25182-PA | 255 | GM25182-PA | 1..255 | 1..276 | 1337 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14213-PA | 456 | GD14213-PA | 1..234 | 1..255 | 1223 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12125-PA | 258 | GJ12125-PA | 1..258 | 1..276 | 1217 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11823-PA | 256 | GK11823-PA | 1..256 | 1..276 | 1258 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20874-PA | 255 | GE20874-PA | 1..255 | 1..276 | 1334 | 91.3 | Plus |
Translation from 623 to 1453
> LD46538.hyp MAQFTLYNKHSAPPSSESTRVDCEHVPLCSINDVQLRFLVPDDLTEVRQL CQEWFPIDYPLSWYEDITSSTRFFALAAVYNLAIIGLIVAEIKPYRNVNK EVIANMSDSDELYTRLSGFPMQDKGILPDSMGRSADVGYILSLGVHRSHR RNGIGSLLLDALMNHLTTAERHSVKAIFLHTLTTNQPAIFFYEKRRFTLH SFLPYYYNIRGKGKDGFTYVNYINGGHPPWTLLYHIKHYASMVRHTSSLC AWLAGRVQQVVRWFYHKLLTRFNFIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Naa60-PA | 276 | CG18177-PA | 1..276 | 1..276 | 1467 | 99.6 | Plus |
Naa60-PB | 255 | CG18177-PB | 1..255 | 1..276 | 1329 | 92 | Plus |
Naa60-PC | 239 | CG18177-PC | 1..218 | 1..239 | 1112 | 89.5 | Plus |