BDGP Sequence Production Resources |
Search the DGRC for LD46602
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 466 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | Aps-RA |
Protein status: | LD46602.pep: gold |
Preliminary Size: | 1704 |
Sequenced Size: | 1620 |
Gene | Date | Evidence |
---|---|---|
CG6391 | 2002-01-01 | Sim4 clustering to Release 2 |
CG6391 | 2002-05-18 | Blastp of sequenced clone |
CG6391 | 2003-01-01 | Sim4 clustering to Release 3 |
Aps | 2008-04-29 | Release 5.5 accounting |
Aps | 2008-08-15 | Release 5.9 accounting |
Aps | 2008-12-18 | 5.12 accounting |
1620 bp (1620 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118969
> LD46602.complete GTCACACTCTTTGAAAAAAGTGTCGTCTTTAGATTTTGTTTGTGCACTTT TCGCCATTTCCCTTTGTATTCCGTCGAGTGAGGAACAGCGGAAGCCAGGG AGCGCAAGAGTTGCCGAGAAGCACCTGCAAAATAGCGGCACGAGATCGCC AGAAAAGCAGAAAATCGCAAGAAGCAAAAGCGACCGGCTCAACACTTCCA CACGCAAATACCCAGAGCCCCCCACACACACACACACACACACACACATC CAACACTTGTTGCAGTGGTCGAGGAGAAGGGGCACCACAGCGATAAGAGG AGAAGGGACGAGGAGCAGGAGGAGAACAAGTGCCTAAGAAGACAACAACG CGCATCTGCTATCAGCGAATACCACTGCAAACATGGTCAAGGAGAAGCCC AACTCGACTCGCATCTACGACAAGGATGGATTTAGGCGCCGGGCTGCTTG TATTTGCGTGAAATCGGAGAATGAGGCGGAGGTACTCTTGGTAACCTCAT CTCGTCGCCCGGAGTTGTGGATCGTTCCAGGAGGCGGCGTTGAACCAGAA GAGGAGTCATCGGTGACAGCCGTGCGCGAAGTGCTCGAAGAAGCCGGCGT GGTTGGCGATCTGGGTCGTTGTCTCGGTGTATTCGAGAACAATGACCACA TGCATCGCACCGAGGTGTTCGTGATGAACGTGACTCAGGAACTGGACGAG TGGGAGGATTCGCGGAGCATCGGTCGCAAGCGCCAGTGGTTCACCATCGA TGATGCACTCTCGCAGCTGGCGCTGCATAAGCCGACGCAGCAACACTATC TGATGCAGCTGCAGCACTCGAAGACGCTGGACAACACGAATCGCGTGGTG AACGCCACGCATCCGCCCAAGTTGACCAATGCCGCCACCCCAGCCGCATC TCCCACTACGGCATAAAGACATCGGGATGCAGGATCCGGATGGCAGGCAG CAGTAACCACACATGCACACCACACTTAACTGCGAGACTAACACTAACCC CAAAACTAAACCCATACCGAGAACCAACCATACACATTTTGACATTTTGG AAATTAACAAATAGACAGGCAGTCTTCTAGATTATGTTGGTTAAGCGATA CTTATGTTACCCCGCATCCCCCACATAGCCCCATTTTCGTTTAAGTTTAA GTCAAGGCGTTCATTTATGTCTTTAGTAAGTGTATCGGAACTAAATTTAT ATGTTTACTCCAGAGCGAGTGGAGAGGAGGTGAAGAAAACAAAAACGCTA CTCGATCAATGCTAAGCGATAACTTATTATTATTCGAGATCTATAACACG ACGCAAAAGTAGGCGGAAACAACATGTAATAATTTTTGAGCGAATAGCAC TTTTTGCAAACACGAAATGGAACTAAACAAACAAAATCTAAAACTAGATG AACTAAACAACAAAATCCAGAATAGCGATATCTATTAGATTTTTCTACTC TTTTTTATAATTTACTCAAAAGGCGTCTTAATTGATTAATGTAACAAGCA AACCAATTGGAATCGGCTTTAGCAAGCGCAAAAGGAGATCTTAATTAACT ATGCTAAGCTGCCTAAATAAAAACAAAAACTATTTAAGCGATGACTAACG AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 10886500..10887464 | 1600..636 | 4825 | 100 | Minus |
chr3L | 24539361 | chr3L | 10889031..10889395 | 382..17 | 1750 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 10887522..10887679 | 637..480 | 790 | 100 | Minus |
chr3L | 24539361 | chr3L | 10887830..10887930 | 483..383 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 10895445..10896411 | 1602..636 | 4835 | 100 | Minus |
3L | 28110227 | 3L | 10897978..10898343 | 382..17 | 1830 | 100 | Minus |
3L | 28110227 | 3L | 10896469..10896626 | 637..480 | 790 | 100 | Minus |
3L | 28110227 | 3L | 10896777..10896877 | 483..383 | 505 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 10888545..10889511 | 1602..636 | 4835 | 100 | Minus |
3L | 28103327 | 3L | 10891078..10891443 | 382..17 | 1830 | 100 | Minus |
3L | 28103327 | 3L | 10889569..10889726 | 637..480 | 790 | 100 | Minus |
3L | 28103327 | 3L | 10889877..10889977 | 483..383 | 505 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 10886500..10887462 | 638..1600 | 100 | <- | Minus |
chr3L | 10887522..10887677 | 482..637 | 100 | <- | Minus |
chr3L | 10887832..10887930 | 383..481 | 100 | <- | Minus |
chr3L | 10889031..10889395 | 17..382 | 92 | <- | Minus |
chr3L | 10890148..10890163 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RC | 1..534 | 383..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RC | 1..534 | 383..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RA | 1..534 | 383..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RC | 1..534 | 383..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RA | 1..534 | 383..916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RA | 36..1635 | 1..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RA | 13..1612 | 1..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RB | 12..27 | 1..16 | 100 | -> | Plus |
Aps-RB | 781..2364 | 17..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RA | 36..1635 | 1..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Aps-RB | 12..27 | 1..16 | 100 | -> | Plus |
Aps-RB | 781..2364 | 17..1600 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10897978..10898343 | 17..382 | 100 | <- | Minus |
3L | 10899097..10899112 | 1..16 | 100 | Minus | |
3L | 10895447..10896409 | 638..1600 | 100 | <- | Minus |
3L | 10896469..10896624 | 482..637 | 100 | <- | Minus |
3L | 10896779..10896877 | 383..481 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10897978..10898343 | 17..382 | 100 | <- | Minus |
3L | 10899097..10899112 | 1..16 | 100 | Minus | |
3L | 10895447..10896409 | 638..1600 | 100 | <- | Minus |
3L | 10896469..10896624 | 482..637 | 100 | <- | Minus |
3L | 10896779..10896877 | 383..481 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10897978..10898343 | 17..382 | 100 | <- | Minus |
3L | 10899097..10899112 | 1..16 | 100 | Minus | |
3L | 10895447..10896409 | 638..1600 | 100 | <- | Minus |
3L | 10896469..10896624 | 482..637 | 100 | <- | Minus |
3L | 10896779..10896877 | 383..481 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 10888547..10889509 | 638..1600 | 100 | <- | Minus |
arm_3L | 10889569..10889724 | 482..637 | 100 | <- | Minus |
arm_3L | 10889879..10889977 | 383..481 | 100 | <- | Minus |
arm_3L | 10891078..10891443 | 17..382 | 100 | <- | Minus |
arm_3L | 10892197..10892212 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10888547..10889509 | 638..1600 | 100 | <- | Minus |
3L | 10889569..10889724 | 482..637 | 100 | <- | Minus |
3L | 10889879..10889977 | 383..481 | 100 | <- | Minus |
3L | 10891078..10891443 | 17..382 | 100 | <- | Minus |
3L | 10892197..10892212 | 1..16 | 100 | Minus |
Translation from 382 to 915
> LD46602.pep MVKEKPNSTRIYDKDGFRRRAACICVKSENEAEVLLVTSSRRPELWIVPG GGVEPEEESSVTAVREVLEEAGVVGDLGRCLGVFENNDHMHRTEVFVMNV TQELDEWEDSRSIGRKRQWFTIDDALSQLALHKPTQQHYLMQLQHSKTLD NTNRVVNATHPPKLTNAATPAASPTTA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23815-PA | 187 | GF23815-PA | 11..187 | 1..177 | 942 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13955-PA | 177 | GG13955-PA | 1..177 | 1..177 | 947 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16579-PA | 180 | GH16579-PA | 1..180 | 1..177 | 843 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Aps-PC | 177 | CG6391-PC | 1..177 | 1..177 | 926 | 100 | Plus |
Aps-PB | 177 | CG6391-PB | 1..177 | 1..177 | 926 | 100 | Plus |
Aps-PA | 177 | CG6391-PA | 1..177 | 1..177 | 926 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13875-PA | 180 | GI13875-PA | 1..180 | 1..177 | 836 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11750-PA | 229 | GL11750-PA | 53..229 | 1..177 | 868 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19558-PA | 178 | GA19558-PA | 1..178 | 1..177 | 895 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24794-PA | 177 | GM24794-PA | 1..177 | 1..177 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17584-PA | 177 | GD17584-PA | 1..177 | 1..177 | 950 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11730-PA | 180 | GJ11730-PA | 1..180 | 1..177 | 835 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18021-PA | 181 | GK18021-PA | 1..165 | 1..165 | 834 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20253-PA | 177 | GE20253-PA | 1..177 | 1..177 | 947 | 99.4 | Plus |
Translation from 382 to 915
> LD46602.hyp MVKEKPNSTRIYDKDGFRRRAACICVKSENEAEVLLVTSSRRPELWIVPG GGVEPEEESSVTAVREVLEEAGVVGDLGRCLGVFENNDHMHRTEVFVMNV TQELDEWEDSRSIGRKRQWFTIDDALSQLALHKPTQQHYLMQLQHSKTLD NTNRVVNATHPPKLTNAATPAASPTTA*