BDGP Sequence Production Resources |
Search the DGRC for LD46621
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 466 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | c12.1-RA |
Protein status: | LD46621.pep: gold |
Preliminary Size: | 1377 |
Sequenced Size: | 1239 |
Gene | Date | Evidence |
---|---|---|
CG12135 | 2001-01-01 | Release 2 assignment |
CG12135 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12135 | 2003-02-27 | Blastp of sequenced clone |
c12.1 | 2008-04-29 | Release 5.5 accounting |
c12.1 | 2008-08-15 | Release 5.9 accounting |
c12.1 | 2008-12-18 | 5.12 accounting |
1239 bp (1239 high quality bases) assembled on 2003-02-27
GenBank Submission: AY069693
> LD46621.complete ACAAAGCACGCAGTTCGGAAATTCATTTCACTTTTCATCAATTTAACAAT TAAACGCATAACTAGCTAGTTGAAAATGACCACAGCAGCGCGTCCGACCT TCGATCCAGCCCGCGGAGGATCCGGTCGCGGCGAAAAGGATCTGAGTGCA CTGAGCAAGCAGTACTCCAGTCGCGATTTGCCAGGCCACACGAAACTGAA ATACAGGGAGACTGGCCAGGGCACCAGCGATGAGAACCGCAACCGTGACT TCCGCAAGGAGCTGGAGGAGCGCGAACGTGAGGCGCGCTCCGGAACGGGA GCCACTTCGTCGTCGTCGGGCAAGGCACTGCCCTCCATTGTACGCAAGGC GATTGAGGCGAACAACGCCGGCGGTGGCAGCAGTGCCGCAAAGCGTTCCA AGCCGGACGCAGGGCAGCAGCAAGCGCAGCAGGCGGCTCAGCAGCAGGCC GCCAATATGGACGCCGATGAGCCGCTGGACAACGATAGCTCCGATTCGGA CAGCGATTCCGATGACGATGATGCCGCCCTGCTGGCCGAGCTGCAGAAGA TCAAGCAGGAACGTCTGCAGGAGACGGCGCGTCGCGAGTCGGAAAAGAAG CAGGAGGACGAACGCATACGCATGGAGAACATCCTGTCCGGCAATCCACT GATGAACTATGAGCCCGGCACCGCCGCCTCGGCAGCGGGACGTGCCTCTG GACTGGGCGGTGATCTAAAGATAAAGCGCCGCTGGGACGATGATGTGGTC TTTAAGAATTGCGCCAGATCTGCGCCCGATAAGAAGACGCACTTCGTCAA TGACGCCCTGCGCTCCGATTTCCACAAGAAGTTCATGGACAAGTACATTA AGTAGGCAGCATCTGGGACTCGCTCTCAAGTTTCAGCCGCGCTCTTTTTT TGTAATAGTTTAAGTAAAACAATTGTCAACCCTCTTTGTCCTTTCACCCC TCCCCCCACAAGCTGTTCATTAAATTTCGTATTTTGTAAGATAACTCTGA TATCCAATAATCATAAACAATCTTTCTAAGCTAAATACCGATTGGTTTCG TACGTAGCAAACTGACCATTTTGTAAGGCATTTGCTTTTTAAGTTTTTCA GTTTTCTTTTGAACAGTGAATGATAAATTTCTTTAAACGAGAAACATATT TTTTAGTATGTATAAGATCTTTCTTATGTAATTAATTTTTGGAATAATTA AATGGAATGCTAGCCAGATTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
c12_1-RA | 1394 | c12_1-RA | 116..1333 | 1..1218 | 6090 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9209639..9210652 | 207..1220 | 99 | <- | Minus |
chrX | 9210716..9210921 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 1..780 | 76..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 1..780 | 76..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 1..780 | 76..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 1..780 | 76..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 1..780 | 76..855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 48..1267 | 1..1220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 48..1267 | 1..1220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 27..1246 | 1..1220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 48..1267 | 1..1220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
c12.1-RA | 27..1246 | 1..1220 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9317915..9318928 | 207..1220 | 99 | <- | Minus |
X | 9318992..9319197 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9317915..9318928 | 207..1220 | 99 | <- | Minus |
X | 9318992..9319197 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9317915..9318928 | 207..1220 | 99 | <- | Minus |
X | 9318992..9319197 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9211948..9212961 | 207..1220 | 99 | <- | Minus |
arm_X | 9213025..9213230 | 1..206 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9326013..9327026 | 207..1220 | 99 | <- | Minus |
X | 9327090..9327295 | 1..206 | 100 | Minus |
Translation from 75 to 854
> LD46621.pep MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGT SDENRNRDFRKELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGG GSSAAKRSKPDAGQQQAQQAAQQQAANMDADEPLDNDSSDSDSDSDDDDA ALLAELQKIKQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTA ASAAGRASGLGGDLKIKRRWDDDVVFKNCARSAPDKKTHFVNDALRSDFH KKFMDKYIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21803-PA | 252 | GF21803-PA | 1..252 | 1..259 | 996 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18981-PA | 257 | GG18981-PA | 1..257 | 1..259 | 1013 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12902-PA | 254 | GH12902-PA | 1..254 | 1..259 | 955 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
c12.1-PA | 259 | CG12135-PA | 1..259 | 1..259 | 1319 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14379-PA | 255 | GI14379-PA | 1..255 | 1..259 | 1032 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16509-PA | 250 | GL16509-PA | 1..250 | 1..259 | 886 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11429-PA | 250 | GA11429-PA | 1..250 | 1..259 | 880 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22219-PA | 259 | GM22219-PA | 1..259 | 1..259 | 1333 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24660-PA | 259 | GD24660-PA | 1..259 | 1..259 | 1339 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19417-PA | 256 | GJ19417-PA | 1..256 | 1..259 | 1037 | 86.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25556-PA | 253 | GK25556-PA | 1..253 | 1..259 | 1012 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15453-PA | 257 | GE15453-PA | 1..257 | 1..259 | 1279 | 96.1 | Plus |
Translation from 75 to 854
> LD46621.hyp MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGT SDENRNRDFRKELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGG GSSAAKRSKPDAGQQQAQQAAQQQAANMDADEPLDNDSSDSDSDSDDDDA ALLAELQKIKQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTA ASAAGRASGLGGDLKIKRRWDDDVVFKNCARSAPDKKTHFVNDALRSDFH KKFMDKYIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
c12.1-PA | 259 | CG12135-PA | 1..259 | 1..259 | 1319 | 100 | Plus |