Clone LD46661 Report

Search the DGRC for LD46661

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:466
Well:61
Vector:pOT2
Associated Gene/Transcripthep-RA
Protein status:LD46661.pep: gold
Preliminary Size:4583
Sequenced Size:4846

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2190 2001-01-01 Release 2 assignment
CG4353 2001-01-01 Release 2 assignment
CG4353 2001-11-29 Blastp of sequenced clone
CG4353 2003-01-01 Sim4 clustering to Release 3
hep 2008-04-29 Release 5.5 accounting
hep 2008-08-15 Release 5.9 accounting
hep 2008-12-18 5.12 accounting

Clone Sequence Records

LD46661.complete Sequence

4846 bp (4846 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069695

> LD46661.complete
AAAGCGAGTGATCAAATTGTGCCAGTGATACCGCCGCCCGCGGTCGCGAA
ACGAATCGATTGCAGAAGTGCGACAAACAGCGCCGCGAAAGGAAAACAAC
CGATGAAATATTCTCCCAAAAAAGGAGGAAAAAATCGCAAGTTGTTGTTG
CCGTTGCTGCTGAAAAAGAAAGAGAGAGAGGGCGCTGCGTGTATGCCTGT
GTGTGTGCGTGTGTGGGGGTGAGGATGTCTCTCTCTAATGCACAGTGACT
GTGTTTTCCTTTTTTCGATTTTGTTTTTGTGCCCCCCCTTGGCAAACAAC
AAAAGTCCAAGCAATCCTTTATTTTTGCAAGTGTAAAGTTTACAGTGTAT
GTGTGCCGCCGAACAACAACAACATCAGCGACAAAACAAACAGGGCGCAC
AGCAAAACAATTCACACACACACGCACCCTCCCCCGCCTGCGCGCGCTTG
TGTGTGTGTGAGAGAGAGGGAGTGAGTGAGAGGAAAATCGAAGAAGTGCT
GGCCAAAAAACGGCGAAAAAAATTTAATAAATACCAAAATCCAACGATAC
TAGCAACTAACTATAAAAAATCGAACCAAATCGACTCGATATAATGTCCA
CCATTGAGTTCGAAACGATCGGCAGTCGGCTGCAATCCTTGGAGGCAAAG
CTCCAGGCGCAGAATGAGTCCCACGACCAGATCGTCCTCTCCGGTGCGCG
CGGCCCTGTCGTTTCCGGTTCCGTTCCATCTGCCCGCGTCCCGCCCCTGG
CGACATCCGCATCCGCAGCCACATCCGCCACCCACGCACCTTCCTTGGGC
GCAGGTTCCGTTTCCGGATCGGGTATCAGCATAGCCCAGCGTCCAGCACC
TCCAGTTCCTCATGCGACGCCCTTCGGCAGCGCCAGCGCCTCGTCATCAT
CCTCATCCGCATCCGCATTTGCATCCGCAGCACCGGCGACGGGCACCTTC
GGTGGAACATACACCCCGCCGACAACTAGAGTGTCGCGAGCCACGCCCAC
ACTGCCCATGCTTTCTAGTGGTCCCGGTGGTGGACTGAATCGTACGCGGC
CGGTGATACTTCCGCTGCCCACGCCGCCACATCCTCCAGTTTCGGAAACG
GACATGAAGCTGAAGATCATCATGGAGCAGACCGGCAAGCTGAACATCAA
CGGGCGGCAGTATCCGACGGACATCAATGACCTCAAGCACCTGGGCGACC
TGGGCAATGGGACTAGCGGCAATGTGGTGAAGATGATGCACCTGTCCAGC
AACACGATCATCGCCGTGAAGCAGATGCGACGCACTGGCAACGCGGAGGA
GAACAAACGCATCCTGATGGATCTGGATGTTGTGCTCAAATCGCACGACT
GCAAGTACATTGTCAAGTGCCTTGGCTGCTTCGTTCGCGATCCGGATGTG
TGGATCTGCATGGAGCTGATGTCCATGTGCTTTGACAAGCTGCTCAAGCT
GTCCAAGAAGCCGGTGCCGGAACAGATCCTGGGCAAGGTCACAGTGGCGA
CGGTCAACGCATTGTCCTACTTGAAGGACAAGCACGGAGTCATCCATCGA
GATGTGAAGCCCTCGAACATTCTGATCGATGAGCGCGGGAACATCAAGCT
CTGTGATTTCGGGATCAGCGGACGCCTGGTGGACTCCAAGGCCAACACTC
GATCCGCCGGCTGTGCAGCTTATATGGCGCCGGAGCGCATCGACCCCAAG
AAACCAAAGTACGACATTCGCGCAGATGTGTGGTCACTGGGCATAACGCT
GGTGGAGCTGGCCACAGCGCGATCCCCGTACGAGGGATGCAACACGGACT
TCGAGGTGCTCACCAAGGTGCTTGACTCGGAGCCGCCGTGTTTGCCATAC
GGCGAGGGTTACAACTTTAGTCAGCAGTTCCGCGATTTCGTCATCAAGTG
CCTCACAAAGAACCATCAGGATCGACCCAAGTATCCGGAGCTTTTGGCCC
AGCCCTTCATCCGGATTTATGAATCAGCCAAAGTAGATGTGCCCAATTGG
TTTCAGAGCATCAAGGATAACCGACTGCGCGCCAATGGCGATCCAACGCT
CCAGAGGGCAACGGCGACTGGAAGTGCGATCGGTTCTGGGGCCGGATCTC
TCGCAGGATCAGGATCAGGATCCGCAGGTGGAGCTGTAAAATATGGTAGG
GCGACAACGTATGCGGGGCAGAGTCCCACAAATCCGCAGAAGACAATAAA
ACCCACTCAGATACCGAGTTACCAGCAGCAACAGTCGCAGTTTTTCATGC
AATCAGCCACACAACTACCTCAAACAACAACCACAACACCGACGGCAACG
ACAAACTGTTTCGGCGGCAGCGGAAACGGAAATGGAAGAGGAAACGGCAG
CGGCGGAAGCGGAAATGGTAGCGGAAGCAGCAGCAGTGCCAGTCCTCTAT
CGCCACCAAGCGCCGGTATCGGCGATCTTAACCGGCTTTATCGCAAATCG
CCGTTCATGCAGCGAAAACTGAGCAACGGATCCCATCATCCGCACTACAA
ATATAACGACGAGAGCCCCAAGAAGGAGTCCATGTTTAGTAGCATCGGTC
AATCGATTCTACGCAATCTGACAACATCGCCCTTCAGCCAAAAGAAACAC
AATTCAACTGCAACAACAATACCACTGCCGCACAACAACCAAACATTGAT
CACGGATGCAGCAACAGCAGCAGCAGCGGCGGCAACAGCAACAACACCGC
CAAATATTGCAGCTACAGTGCTCACGACAACGCCAACGACCACGCCCACT
TGGCGCCTGCCAACGGAAAATTCCCAAGCCTACGACAGCTGTGATAGTAG
TAGTAATGCGACCACGACGACCTTGAATTTGGGCCTCTCCTCACCCTCCC
CCTCGTTGCCGCGCAAGCAATTCCCCACAGAATCGCCGACCCTGCAACTC
ACGAGTCAGCAGCAGCAGCAGCCACAGCGATTGCAGCCGGGCAATCAGAG
CCCCATAGTGCTGCAGCGCTTCTACCACCAGCAGAATCAGCTGCGCGAGA
AGGAGGCGGCTGAGCGGTATCAGCAGCAGCGCCAGCAGCCGCCCGTTGGA
GTGACCAGCACGAATCCGTTTCACAGCAACTATGTGCCGCCGCCGCCATC
AACGCACTCCACCTCTAGTCAGTCCTCCACGCAGTCGACGTGTTCGCAAA
TCGCCATCAATCCCGCCAGCATATCCCCATCGTCTGGTTCCGGAACGGGA
AACATGGCGGGATTGGGAATCGGTTCGGCTCCGGCATCGGGATTGGGGGC
AGCTGGTCACTTTGGAGCGGGCGGCACTGGCGAGCAGCTGCAGTATCAGC
CGCTGCCCATCGCCGCCGAGGCAACGGGAACGAGTCCCACGCTCCAGTCT
AGATCACCGGAACAGCAGTCGGATTATGGAGGAAACGGCAACATGGTGGC
CAGTAAGCTGAGCAAGCTGTACGCACGCCGACAACTTTTGGGCCAGAGCT
CCAGCAGCGGAGCGAGCAATAGCAGCCTGGACGGTTGCAGTCGGGAGCAA
CACGATGCAGGCTGGTTCAACACTCTTGCCGGTGCCATGAAGCGACAGTT
TGCCACCTATGTTAAAACCCAATTGAATTCCACAGCCACGTCGCCGGTGG
CGTCCAGCATGGATCGAGACCAGGAGCCAGTGCATCCGCAGCCGCCGGCG
TACAGGAGCGTTGTGAATAACGGCAGCGGTGGCAAGTCTTACTACTATCG
CACCTTGTCGGCGGCCAGCAGCAGTAGCAATACCAGCCAGAGCACCTCGC
CCACGACGGAACCGCTGCCCGGCGGTGGCACCAGTAGCTTTCTGCGTCGC
TATGCAAGCAGTGGACCGGGAGGTAGCATCAGCACGCCGCCCAGTCCGCA
TATCTTGGCGGGATTGGATCGCAGGCATCGAAGTCCAGATCCGCCGCCAC
GCTACAATCGCGGACAGTCACCGCTATTGCTGCGCAAGAATCTGCTGGAG
CTGAGTGGCCAGCCGCCCGGCTCTCCGCTGCTGCACCGAAGATACGTTTC
GGCTTCGCCGCCGCTGCCGCCACCGCGTCGAGGCTCTGAAAGCGTGCCGG
GATCACCGCAGCATTTCCGCACTCGCATCCACTATACACCCGAGCCCCAG
AGACGCATCTACCGTACGATAGATCAATGAGTAGCGCTGCAAATCATGGT
CATGTGATGCTGGTATGGCTTCGACGACGATGCCGCCGACGCTGCTGTTC
ACGACGACAATCAGGACGAGGAGGTGGGACTATTGGAGCCCATTTCCCTG
CCCGTCTCGTCAGCAGTCGGCGACTCGCTGTCGATGCCGGCGTATGCAGG
TGGCCTGGGCACCAGGTTGTCCGGAGCCGAACGGCGAATCGGCGATCGTC
GGACGTGTTCGGCCAGCGGATCGTATTCCAGCTTGTATACGGATAAGGAC
GAATGGCCAGGTGGATCGTCCGGTGGGGCATCGGGTACATCGACGACCAG
AGCTGGATATCCGTGGACATGTGATTGATGACAAACGAAAGTGTTCAAAA
GTCTTATACGTTTAAGTGCTTGAGCCTCAGCGATTCATCTGTATCCGCAT
CTGCTAGACACTTCGTTTCGTTGCGCAGCTCCAATTGTACATAGACATAT
ATCTTAAGGGACCTATATAGACACATCCGATAATAGTGCAATAGTTGAAA
GCAATTCTGTTCGCCCAACAACCGCGCCCCCCCCTGTAACCAAGTCTATA
CTGTTCTATATATCTCTGTATCTGTATCTCCTTCAATGGTAACTCTGTAA
TCAAAAGTTTATACTTTACACAACGTAACTTATTTAATCGTAGCTCTAAA
AAGAAAATGAAACAAAATAGCTAAATCGAAAAAAAAAAAAAAAAAA

LD46661.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
hep-RA 5418 hep-RA 84..4919 1..4836 24165 99.9 Plus
hep-RB 3389 hep-RB 558..2847 2547..4836 11435 99.9 Plus
hep.c 3354 hep.c 71..2127 1..2057 10285 100 Plus
hep.c 3354 hep.c 2453..3354 2057..2958 4510 100 Plus
hep-RB 3389 hep-RB 1..491 2059..2549 2455 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 12980301..12981311 1011..1 5055 100 Minus
chrX 22417052 chrX 12970664..12971503 4828..3990 4120 99.6 Minus
chrX 22417052 chrX 12972446..12973000 3511..2957 2745 99.6 Minus
chrX 22417052 chrX 12973540..12974034 2549..2055 2475 100 Minus
chrX 22417052 chrX 12977595..12978082 1499..1012 2440 100 Minus
chrX 22417052 chrX 12971572..12972055 3991..3508 2420 100 Minus
chrX 22417052 chrX 12973062..12973473 2958..2547 2045 99.8 Minus
chrX 22417052 chrX 12976767..12976988 1900..1679 1095 99.5 Minus
chrX 22417052 chrX 12977354..12977534 1679..1499 845 97.8 Minus
chrX 22417052 chrX 12976537..12976694 2057..1900 775 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:43:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13089359..13090369 1011..1 5055 100 Minus
X 23542271 X 13079723..13080569 4836..3990 4220 99.9 Minus
X 23542271 X 13081512..13082066 3511..2957 2775 100 Minus
X 23542271 X 13082606..13083100 2549..2055 2475 100 Minus
X 23542271 X 13086653..13087140 1499..1012 2440 100 Minus
X 23542271 X 13080638..13081121 3991..3508 2420 100 Minus
X 23542271 X 13082128..13082539 2958..2547 2060 100 Minus
X 23542271 X 13085825..13086046 1900..1679 1110 100 Minus
X 23542271 X 13086412..13086592 1679..1499 905 100 Minus
X 23542271 X 13085595..13085752 2057..1900 790 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13097457..13098467 1011..1 5055 100 Minus
X 23527363 X 13087821..13088667 4836..3990 4220 99.8 Minus
X 23527363 X 13089610..13090164 3511..2957 2775 100 Minus
X 23527363 X 13090704..13091198 2549..2055 2475 100 Minus
X 23527363 X 13094751..13095238 1499..1012 2440 100 Minus
X 23527363 X 13088736..13089219 3991..3508 2420 100 Minus
X 23527363 X 13090226..13090637 2958..2547 2060 100 Minus
X 23527363 X 13093923..13094144 1900..1679 1110 100 Minus
X 23527363 X 13094510..13094690 1679..1499 905 100 Minus
X 23527363 X 13093693..13093850 2057..1900 790 100 Minus
Blast to na_te.dros performed 2019-03-16 22:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2344..2874 2221..2743 270 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2520 2605..2818 231 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2277..2886 2443..3039 212 55.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2364..2538 2572..2749 205 62.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2273..2889 2132..2731 203 53.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6840 2605..2717 201 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6743..6893 2605..2749 199 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6713..6845 2614..2743 198 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6924 2588..2790 189 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6733..6821 2652..2740 184 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6785..6920 2605..2740 184 62.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2430 2622..2749 180 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2331..2446 2605..2717 178 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1072..1166 2610..2704 178 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2357..2997 2103..2743 177 55 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1500..1593 2612..2706 175 67.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2309..2490 2571..2743 174 62 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2879..2983 2610..2717 172 66.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2342..2526 2571..2749 170 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6793..6943 2571..2718 169 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6890 2907..3042 166 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6914 2907..3042 166 59.9 Plus
roo 9092 roo DM_ROO 9092bp 1075..1157 2658..2737 165 68.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6708..6828 2600..2717 164 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6716..6797 2656..2737 158 65.9 Plus
roo 9092 roo DM_ROO 9092bp 1025..1140 2590..2702 158 64.4 Plus
roo 9092 roo DM_ROO 9092bp 1102..1165 2652..2715 158 71.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6928 2907..3035 156 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6865 2907..3041 155 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6772..7006 2571..2806 150 58 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2400 2656..2749 144 63.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2278..2664 2302..2698 141 52.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1553..1632 2906..2986 132 65.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3239..3323 2607..2694 126 65.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2321..2472 2879..3039 125 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1574 2662..2718 123 68.4 Plus
roo 9092 roo DM_ROO 9092bp 1059..1127 2672..2740 120 63.8 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3160..3306 2606..2743 120 60 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 6016..6094 2610..2690 120 65.9 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 972..1011 2659..2698 119 77.5 Plus

LD46661.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:10:45 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 12973062..12973472 2548..2958 90 <- Minus
chrX 12970664..12971501 3992..4828 99 <- Minus
chrX 12971572..12972052 3511..3991 100 <- Minus
chrX 12972447..12972998 2959..3510 99 <- Minus
chrX 12973542..12974032 2057..2547 100 <- Minus
chrX 12976538..12976693 1901..2056 99 <- Minus
chrX 12976767..12976987 1680..1900 99 <- Minus
chrX 12977354..12977533 1500..1679 97 <- Minus
chrX 12977595..12978082 1012..1499 100 <- Minus
chrX 12980301..12981311 1..1011 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:32:29 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 1..3537 594..4130 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:25:46 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 1..3537 594..4130 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:11:22 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 1..3537 594..4130 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:53:07 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 1..3537 594..4130 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:35:33 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 1..3537 594..4130 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:32:29 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 65..4892 1..4828 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:25:46 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 65..4892 1..4828 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:11:22 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 66..4893 1..4828 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:53:07 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 65..4892 1..4828 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:35:33 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
hep-RA 66..4893 1..4828 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:10:45 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
X 13085825..13086045 1680..1900 100 <- Minus
X 13086412..13086591 1500..1679 100 <- Minus
X 13079731..13080567 3992..4828 99 <- Minus
X 13080638..13081118 3511..3991 100 <- Minus
X 13081513..13082064 2959..3510 100 <- Minus
X 13082128..13082538 2548..2958 100 <- Minus
X 13082608..13083098 2057..2547 100 <- Minus
X 13085596..13085751 1901..2056 100 <- Minus
X 13086653..13087140 1012..1499 100 <- Minus
X 13089359..13090369 1..1011 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:10:45 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
X 13085825..13086045 1680..1900 100 <- Minus
X 13086412..13086591 1500..1679 100 <- Minus
X 13079731..13080567 3992..4828 99 <- Minus
X 13080638..13081118 3511..3991 100 <- Minus
X 13081513..13082064 2959..3510 100 <- Minus
X 13082128..13082538 2548..2958 100 <- Minus
X 13082608..13083098 2057..2547 100 <- Minus
X 13085596..13085751 1901..2056 100 <- Minus
X 13086653..13087140 1012..1499 100 <- Minus
X 13089359..13090369 1..1011 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:10:45 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
X 13085825..13086045 1680..1900 100 <- Minus
X 13086412..13086591 1500..1679 100 <- Minus
X 13079731..13080567 3992..4828 99 <- Minus
X 13080638..13081118 3511..3991 100 <- Minus
X 13081513..13082064 2959..3510 100 <- Minus
X 13082128..13082538 2548..2958 100 <- Minus
X 13082608..13083098 2057..2547 100 <- Minus
X 13085596..13085751 1901..2056 100 <- Minus
X 13086653..13087140 1012..1499 100 <- Minus
X 13089359..13090369 1..1011 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:11:22 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12973764..12974600 3992..4828 99 <- Minus
arm_X 12974671..12975151 3511..3991 100 <- Minus
arm_X 12975546..12976097 2959..3510 100 <- Minus
arm_X 12976161..12976571 2548..2958 100 <- Minus
arm_X 12976641..12977131 2057..2547 100 <- Minus
arm_X 12979629..12979784 1901..2056 100 <- Minus
arm_X 12979858..12980078 1680..1900 100 <- Minus
arm_X 12980445..12980624 1500..1679 100 <- Minus
arm_X 12980686..12981173 1012..1499 100 <- Minus
arm_X 12983392..12984402 1..1011 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:29:09 Download gff for LD46661.complete
Subject Subject Range Query Range Percent Splice Strand
X 13093923..13094143 1680..1900 100 <- Minus
X 13094510..13094689 1500..1679 100 <- Minus
X 13087829..13088665 3992..4828 99 <- Minus
X 13088736..13089216 3511..3991 100 <- Minus
X 13089611..13090162 2959..3510 100 <- Minus
X 13090226..13090636 2548..2958 100 <- Minus
X 13090706..13091196 2057..2547 100 <- Minus
X 13093694..13093849 1901..2056 100 <- Minus
X 13094751..13095238 1012..1499 100 <- Minus
X 13097457..13098467 1..1011 100   Minus

LD46661.pep Sequence

Translation from 593 to 4129

> LD46661.pep
MSTIEFETIGSRLQSLEAKLQAQNESHDQIVLSGARGPVVSGSVPSARVP
PLATSASAATSATHAPSLGAGSVSGSGISIAQRPAPPVPHATPFGSASAS
SSSSSASAFASAAPATGTFGGTYTPPTTRVSRATPTLPMLSSGPGGGLNR
TRPVILPLPTPPHPPVSETDMKLKIIMEQTGKLNINGRQYPTDINDLKHL
GDLGNGTSGNVVKMMHLSSNTIIAVKQMRRTGNAEENKRILMDLDVVLKS
HDCKYIVKCLGCFVRDPDVWICMELMSMCFDKLLKLSKKPVPEQILGKVT
VATVNALSYLKDKHGVIHRDVKPSNILIDERGNIKLCDFGISGRLVDSKA
NTRSAGCAAYMAPERIDPKKPKYDIRADVWSLGITLVELATARSPYEGCN
TDFEVLTKVLDSEPPCLPYGEGYNFSQQFRDFVIKCLTKNHQDRPKYPEL
LAQPFIRIYESAKVDVPNWFQSIKDNRLRANGDPTLQRATATGSAIGSGA
GSLAGSGSGSAGGAVKYGRATTYAGQSPTNPQKTIKPTQIPSYQQQQSQF
FMQSATQLPQTTTTTPTATTNCFGGSGNGNGRGNGSGGSGNGSGSSSSAS
PLSPPSAGIGDLNRLYRKSPFMQRKLSNGSHHPHYKYNDESPKKESMFSS
IGQSILRNLTTSPFSQKKHNSTATTIPLPHNNQTLITDAATAAAAAATAT
TPPNIAATVLTTTPTTTPTWRLPTENSQAYDSCDSSSNATTTTLNLGLSS
PSPSLPRKQFPTESPTLQLTSQQQQQPQRLQPGNQSPIVLQRFYHQQNQL
REKEAAERYQQQRQQPPVGVTSTNPFHSNYVPPPPSTHSTSSQSSTQSTC
SQIAINPASISPSSGSGTGNMAGLGIGSAPASGLGAAGHFGAGGTGEQLQ
YQPLPIAAEATGTSPTLQSRSPEQQSDYGGNGNMVASKLSKLYARRQLLG
QSSSSGASNSSLDGCSREQHDAGWFNTLAGAMKRQFATYVKTQLNSTATS
PVASSMDRDQEPVHPQPPAYRSVVNNGSGGKSYYYRTLSAASSSSNTSQS
TSPTTEPLPGGGTSSFLRRYASSGPGGSISTPPSPHILAGLDRRHRSPDP
PPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASPPLPPPRRGSES
VPGSPQHFRTRIHYTPEPQRRIYRTIDQ*

LD46661.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:18:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20874-PA 1186 GF20874-PA 1..1186 1..1178 3464 69.9 Plus
Dana\GF16332-PA 422 GF16332-PA 94..402 174..473 774 49.8 Plus
Dana\GF21403-PA 335 GF21403-PA 4..326 150..475 652 41.8 Plus
Dana\Dsor1-PA 396 GF19085-PA 85..383 195..475 524 38.5 Plus
Dana\GF17125-PA 403 GF17125-PA 19..264 203..457 352 34.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19526-PA 1179 GG19526-PA 1..1179 1..1178 4653 91.8 Plus
Dere\GG17438-PA 424 GG17438-PA 120..404 195..473 778 51.9 Plus
Dere\GG17753-PA 334 GG17753-PA 26..326 177..475 670 45.1 Plus
Dere\GG18305-PA 396 GG18305-PA 85..383 195..475 520 38.5 Plus
Dere\GG20903-PA 666 GG20903-PA 38..294 191..457 364 34.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24549-PA 1419 GH24549-PA 654..1419 614..1178 990 45.6 Plus
Dgri\GH22908-PA 433 GH22908-PA 115..413 179..473 779 50.5 Plus
Dgri\GH24432-PA 342 GH24432-PA 1..327 148..475 668 42.9 Plus
Dgri\GH12793-PA 398 GH12793-PA 69..385 172..475 525 36.9 Plus
Dgri\GH22772-PA 691 GH22772-PA 24..280 191..457 372 33.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
hep-PA 1178 CG4353-PA 1..1178 1..1178 6136 100 Plus
hep-PD 1162 CG4353-PD 1..1153 1..1178 5968 97.9 Plus
hep-PF 1153 CG4353-PF 1..1153 1..1178 5968 97.9 Plus
hep-PE 492 CG4353-PE 1..488 1..488 2537 100 Plus
hep-PC 492 CG4353-PC 1..488 1..488 2537 100 Plus
Mkk4-PC 424 CG9738-PC 33..407 87..476 744 43.4 Plus
Mkk4-PB 424 CG9738-PB 33..407 87..476 744 43.4 Plus
Mkk4-PA 424 CG9738-PA 33..407 87..476 744 43.4 Plus
lic-PA 334 CG12244-PA 26..326 177..475 668 45.4 Plus
Dsor1-PB 393 CG15793-PB 83..374 196..469 489 38.7 Plus
Dsor1-PA 396 CG15793-PA 86..377 196..469 489 38.7 Plus
hpo-PB 669 CG11228-PB 36..294 189..457 355 34.3 Plus
hpo-PA 669 CG11228-PA 36..294 189..457 355 34.3 Plus
hppy-PA 1218 CG7097-PA 19..750 188..964 335 23.1 Plus
GckIII-PA 642 CG5169-PA 19..522 203..738 334 24.8 Plus
hppy-PD 1205 CG7097-PD 19..737 188..964 329 23.2 Plus
Tao-PH 611 CG14217-PH 30..280 200..456 306 32.3 Plus
Tao-PJ 615 CG14217-PJ 30..280 200..456 306 32.3 Plus
Tao-PF 1039 CG14217-PF 30..280 200..456 306 32.3 Plus
Tao-PD 1039 CG14217-PD 30..280 200..456 306 32.3 Plus
Tao-PE 1039 CG14217-PE 30..280 200..456 306 32.3 Plus
Tao-PI 1038 CG14217-PI 30..279 200..456 304 32.3 Plus
hppy-PC 968 CG7097-PC 19..425 188..593 290 26 Plus
ninaC-PD 1135 CG5125-PD 8..282 189..456 278 30 Plus
ninaC-PC 1135 CG5125-PC 8..282 189..456 278 30 Plus
ninaC-PA 1135 CG5125-PA 8..282 189..456 278 30 Plus
ninaC-PB 1501 CG5125-PB 8..282 189..456 278 30 Plus
hppy-PE 934 CG7097-PE 19..291 188..464 277 29.8 Plus
hppy-PB 947 CG7097-PB 19..291 188..464 277 29.8 Plus
Slik-PA 1300 CG4527-PA 40..302 200..463 273 31.2 Plus
Slik-PE 1342 CG4527-PE 40..302 200..463 273 31.2 Plus
Slik-PG 1365 CG4527-PG 40..302 200..463 273 31.2 Plus
Slik-PF 1635 CG4527-PF 40..302 200..463 273 31.2 Plus
Slik-PB 1703 CG4527-PB 40..302 200..463 273 31.2 Plus
Slik-PD 1703 CG4527-PD 40..302 200..463 273 31.2 Plus
msn-PG 1101 CG16973-PG 38..297 203..457 269 31.2 Plus
msn-PC 1102 CG16973-PC 38..297 203..457 269 31.2 Plus
msn-PD 1102 CG16973-PD 38..297 203..457 269 31.2 Plus
msn-PI 1200 CG16973-PI 38..297 203..457 269 31.2 Plus
msn-PB 1200 CG16973-PB 38..297 203..457 269 31.2 Plus
msn-PH 1213 CG16973-PH 38..297 203..457 269 31.2 Plus
msn-PF 1404 CG16973-PF 38..297 203..457 269 31.2 Plus
msn-PA 1504 CG16973-PA 38..297 203..457 269 31.2 Plus
mbt-PA 639 CG18582-PA 367..620 196..457 258 27.3 Plus
fray-PI 552 CG7693-PI 103..377 263..509 255 29.9 Plus
fray-PH 552 CG7693-PH 103..377 263..509 255 29.9 Plus
fray-PG 552 CG7693-PG 103..377 263..509 255 29.9 Plus
fray-PF 552 CG7693-PF 103..377 263..509 255 29.9 Plus
fray-PE 552 CG7693-PE 103..377 263..509 255 29.9 Plus
fray-PC 552 CG7693-PC 103..377 263..509 255 29.9 Plus
fray-PB 552 CG7693-PB 103..377 263..509 255 29.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16263-PA 1287 GI16263-PA 110..827 111..808 2188 66.3 Plus
Dmoj\GI10233-PA 430 GI10233-PA 102..410 174..473 776 49.2 Plus
Dmoj\GI16291-PA 335 GI16291-PA 1..327 148..475 657 42.6 Plus
Dmoj\GI15238-PA 235 GI15238-PA 9..216 280..469 380 40.5 Plus
Dmoj\GI20569-PA 672 GI20569-PA 23..279 191..457 373 34.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16492-PA 1227 GL16492-PA 1..1227 1..1178 3500 67.5 Plus
Dper\GL16519-PA 338 GL16519-PA 1..327 148..475 652 42.9 Plus
Dper\GL24503-PA 420 GL24503-PA 100..400 174..473 612 42.5 Plus
Dper\GL16493-PA 396 GL16493-PA 85..383 195..475 529 38.8 Plus
Dper\GL10521-PA 661 GL10521-PA 21..277 191..457 361 33.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22607-PA 462 GA22607-PA 1..462 1..488 1911 76.2 Plus
Dpse\GA22606-PA 592 GA22606-PA 1..592 622..1178 1440 68.2 Plus
Dpse\GA21998-PA 428 GA21998-PA 100..408 174..473 771 49.5 Plus
Dpse\GA11504-PA 338 GA11504-PA 1..327 148..475 649 42.9 Plus
Dpse\GA13960-PA 396 GA13960-PA 85..383 195..475 529 38.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11518-PA 1180 GM11518-PA 1..1180 1..1178 6002 97.1 Plus
Dsec\GM26332-PA 424 GM26332-PA 120..404 195..473 777 51.9 Plus
Dsec\GM11599-PA 334 GM11599-PA 26..326 177..475 678 45.4 Plus
Dsec\GM22414-PA 396 GM22414-PA 85..383 195..475 506 37.9 Plus
Dsec\GM19825-PA 668 GM19825-PA 38..294 191..457 368 34.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:18:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15909-PA 1047 GD15909-PA 240..1047 378..1178 4034 96.5 Plus
Dsim\GD15909-PA 1047 GD15909-PA 1..215 273..487 1204 99.1 Plus
Dsim\GD20857-PA 424 GD20857-PA 120..404 195..473 777 51.9 Plus
Dsim\lic-PA 334 GD24803-PA 26..326 177..475 678 45.4 Plus
Dsim\Dsor1-PA 336 GD16945-PA 26..317 196..469 485 38.4 Plus
Dsim\GD25317-PA 668 GD25317-PA 38..294 191..457 368 34.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:19:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16904-PA 1317 GJ16904-PA 131..831 115..808 2171 67.9 Plus
Dvir\GJ11038-PA 431 GJ11038-PA 113..411 179..473 784 50.5 Plus
Dvir\GJ16530-PA 335 GJ16530-PA 1..327 148..475 660 43.7 Plus
Dvir\GJ18839-PA 397 GJ18839-PA 85..384 195..475 524 38.7 Plus
Dvir\GJ21419-PA 681 GJ21419-PA 23..323 191..509 369 33.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:19:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25249-PA 1157 GK25249-PA 3..1157 2..1178 2875 60 Plus
Dwil\GK14073-PA 426 GK14073-PA 98..406 174..473 762 48.9 Plus
Dwil\GK25671-PA 336 GK25671-PA 1..327 148..475 676 43.2 Plus
Dwil\GK25111-PA 397 GK25111-PA 85..384 195..475 511 38.1 Plus
Dwil\GK15703-PA 636 GK15703-PA 17..273 191..457 364 33.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16180-PA 492 GE16180-PA 1..488 1..488 2532 96.7 Plus
Dyak\GE16181-PA 723 GE16181-PA 6..723 487..1178 2295 85.3 Plus
Dyak\GE24839-PA 424 GE24839-PA 120..404 195..473 775 51.9 Plus
Dyak\GE17041-PA 334 GE17041-PA 26..326 177..475 672 45.1 Plus
Dyak\GE17784-PA 396 GE17784-PA 85..383 195..475 520 38.5 Plus

LD46661.hyp Sequence

Translation from 593 to 4129

> LD46661.hyp
MSTIEFETIGSRLQSLEAKLQAQNESHDQIVLSGARGPVVSGSVPSARVP
PLATSASAATSATHAPSLGAGSVSGSGISIAQRPAPPVPHATPFGSASAS
SSSSSASAFASAAPATGTFGGTYTPPTTRVSRATPTLPMLSSGPGGGLNR
TRPVILPLPTPPHPPVSETDMKLKIIMEQTGKLNINGRQYPTDINDLKHL
GDLGNGTSGNVVKMMHLSSNTIIAVKQMRRTGNAEENKRILMDLDVVLKS
HDCKYIVKCLGCFVRDPDVWICMELMSMCFDKLLKLSKKPVPEQILGKVT
VATVNALSYLKDKHGVIHRDVKPSNILIDERGNIKLCDFGISGRLVDSKA
NTRSAGCAAYMAPERIDPKKPKYDIRADVWSLGITLVELATARSPYEGCN
TDFEVLTKVLDSEPPCLPYGEGYNFSQQFRDFVIKCLTKNHQDRPKYPEL
LAQPFIRIYESAKVDVPNWFQSIKDNRLRANGDPTLQRATATGSAIGSGA
GSLAGSGSGSAGGAVKYGRATTYAGQSPTNPQKTIKPTQIPSYQQQQSQF
FMQSATQLPQTTTTTPTATTNCFGGSGNGNGRGNGSGGSGNGSGSSSSAS
PLSPPSAGIGDLNRLYRKSPFMQRKLSNGSHHPHYKYNDESPKKESMFSS
IGQSILRNLTTSPFSQKKHNSTATTIPLPHNNQTLITDAATAAAAAATAT
TPPNIAATVLTTTPTTTPTWRLPTENSQAYDSCDSSSNATTTTLNLGLSS
PSPSLPRKQFPTESPTLQLTSQQQQQPQRLQPGNQSPIVLQRFYHQQNQL
REKEAAERYQQQRQQPPVGVTSTNPFHSNYVPPPPSTHSTSSQSSTQSTC
SQIAINPASISPSSGSGTGNMAGLGIGSAPASGLGAAGHFGAGGTGEQLQ
YQPLPIAAEATGTSPTLQSRSPEQQSDYGGNGNMVASKLSKLYARRQLLG
QSSSSGASNSSLDGCSREQHDAGWFNTLAGAMKRQFATYVKTQLNSTATS
PVASSMDRDQEPVHPQPPAYRSVVNNGSGGKSYYYRTLSAASSSSNTSQS
TSPTTEPLPGGGTSSFLRRYASSGPGGSISTPPSPHILAGLDRRHRSPDP
PPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRYVSASPPLPPPRRGSES
VPGSPQHFRTRIHYTPEPQRRIYRTIDQ*

LD46661.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
hep-PA 1178 CG4353-PA 1..1178 1..1178 6136 100 Plus
hep-PD 1162 CG4353-PD 1..1153 1..1178 5968 97.9 Plus
hep-PF 1153 CG4353-PF 1..1153 1..1178 5968 97.9 Plus
hep-PE 492 CG4353-PE 1..488 1..488 2537 100 Plus
hep-PC 492 CG4353-PC 1..488 1..488 2537 100 Plus