BDGP Sequence Production Resources |
Search the DGRC for LD46760
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 467 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1440-RA |
Protein status: | LD46760.pep: gold |
Preliminary Size: | 1983 |
Sequenced Size: | 1873 |
Gene | Date | Evidence |
---|---|---|
CG1440 | 2002-05-20 | Blastp of sequenced clone |
CG1440 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1440 | 2008-04-29 | Release 5.5 accounting |
CG1440 | 2008-08-15 | Release 5.9 accounting |
CG1440 | 2008-12-18 | 5.12 accounting |
1873 bp (1873 high quality bases) assembled on 2002-05-20
GenBank Submission: AY118343
> LD46760.complete GAAACAAAAAAAACACTCCACAGCAAACCAAAATAAAATCAAATTAAAAA AATTATCCAAATTGCGCATAGTACGACTGCAGTAGCCAGAAGTGGTCAGG AGTTCGGAAAACTGAAGGACATCCAAATCTGGGTCGAGCAAAATTCGAAG TGACCTTATAAAATCAAAACAAGTGTAAAATCACAAAAGAAAGGAGAAAA AACCATTAAATATGTCTGACAACAACAGCGGATCCGGAGGAGGTGGAAGC GGTGGCGGTGGCGCCGGTAACAATAACAGTGCCAATAGTGGTAAGAACTC GACGCACAGGTTCGCTGAGACCAGTGTGATCACCAATCAATTGTTGGAAA AATGGCGGAAAAACTTCTACAGCGAACCGAAGAATCTGCTGGCGCAGAAC GTCTGCTCACGCGTTGATCCGTTCGATGTGTGCCTGTCCAGGAAGGCACT GGAGACCACCAATCATGTGTTCAACTACAAGGTGGAAACGGAGGGCAAGC CGGTGACCAATCAAAGGAGCTCCGGCCGCTGCTGGCTGTTTGCGGCCCTC AACTGCATCCGCCTGCCATTCATGAAGAACTACAATCTGGACGAGTTCGA ATTCTCGCAGGCCTTCCTCTTCTACTGGGACAAGATCGAGCGTTGCAACT ACTTTCTCAACAATGTTGTGAAGACGGCACAGCGCGGCGAGAAGGTTGAT GGTCGTCTGGTGTCGTTCCTGCTACTCGATCCCACCTCCGATGGCGGCCA GTGGGACATGCTGGTCAATCTGATAACCAAACACGGCCTTATGCCAAAGA AATGCTTTCCCGAGAGCTTCAGCTGCGAGTCCAGCTTACGAATGAACGCC ATACTGAAGAGCAAGCTACGGGAGTATGCCCGCAATTTGCGCGTGCTGAT GGAGAAGAATCCCACGGATGAGGAGATCGCCTGCAAGATCCAGGAGCAAA TGGCCGAGATCTACAAGGTGGTTGGCATTTGCCTGGGCATACCCTCGGAG ACCTTCACCTGGGAGTACTATGACAAGAGCAAGAACTATCAGTCAATCGG ACCCGTTAGTTCGCTGGAGTTCTATGAGCGTTATGTTAAGCCGCATTTCA ACGTGGAGGACAAAGTGTGCCTGGTCACCGATCCTCGGCCGACGAGTAGC TATGACCAGGCATACACTGTTGACTGCCTGGGCAACGTGGTTGGCGGTCG ACCCGTTCTGTATAACAATCAGTCCGTCGAACTGCTCCTTGCGGTTGTCA CCAAGTCGCTAAAGGCCGGCGAGGCCGTTTGGTTTGGCTGCGAGGTTAGC AAGCGATTCGCCTCCAAGCAGGGCATCGAGGATGTGGATGTCCACGATTT TAAGCTGGTCTTCGACATTGACATACAAACGACATTCTCCAAGGCAGACC GCCTGATCTACGGTGAATCGGCCATGACCCATGCCATGGTTTTCACCGCC GTATCCGTGGATAAGAGCGGCGTGGCCCAGAAATTGCGTGTGGAGAACTC GTGGGGTGAGGATCGCGGCGAGAAGGGCTATCTGGTGATGAACGCCGATT GGTTTAGGGAGTTTGGATTCGAGGTGGTCGTCGACAAGAAGTACGTGCCC GAGGATGTGTTGCGCGTGTTCGACATGGATCCGATCGTACTGCCTGCCTG GGATCCCATGGGTACGCTAGCACAGTAGGTCCAGGTTGCCATCAAGACAC ACCCAACACACCTAACACACACCCAACACACACACACACACCCAACACAC ACACACACACCCAACACACACCCAACACACACACACACATATAAAAAAAC ATATATTAAAATACAATATATATAAAGCTTTACGAGCAGCAATCTTCGAG CAGCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8330851..8331500 | 216..865 | 3205 | 99.5 | Plus |
chrX | 22417052 | chrX | 8331559..8332036 | 864..1341 | 2345 | 99.4 | Plus |
chrX | 22417052 | chrX | 8332287..8332682 | 1463..1854 | 1785 | 97.7 | Plus |
chrX | 22417052 | chrX | 8328823..8329037 | 1..215 | 1075 | 100 | Plus |
chrX | 22417052 | chrX | 8332103..8332223 | 1342..1462 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8439109..8439758 | 216..865 | 3250 | 100 | Plus |
X | 23542271 | X | 8439817..8440294 | 864..1341 | 2390 | 100 | Plus |
X | 23542271 | X | 8440545..8440937 | 1463..1855 | 1965 | 100 | Plus |
X | 23542271 | X | 8437080..8437294 | 1..215 | 1075 | 100 | Plus |
X | 23542271 | X | 8440361..8440481 | 1342..1462 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8447207..8447856 | 216..865 | 3250 | 100 | Plus |
X | 23527363 | X | 8447915..8448392 | 864..1341 | 2390 | 100 | Plus |
X | 23527363 | X | 8448643..8449035 | 1463..1855 | 1965 | 100 | Plus |
X | 23527363 | X | 8445178..8445392 | 1..215 | 1075 | 100 | Plus |
X | 23527363 | X | 8448459..8448579 | 1342..1462 | 605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8328823..8329037 | 1..215 | 100 | -> | Plus |
chrX | 8330851..8331500 | 216..865 | 99 | -> | Plus |
chrX | 8331561..8332036 | 866..1341 | 99 | -> | Plus |
chrX | 8332103..8332223 | 1342..1462 | 100 | -> | Plus |
chrX | 8332287..8332520 | 1463..1696 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1467 | 212..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1467 | 212..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1467 | 212..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1467 | 212..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1467 | 212..1678 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1854 | 1..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1854 | 1..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1854 | 1..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 1..1854 | 1..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1440-RA | 24..1877 | 1..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8440361..8440481 | 1342..1462 | 100 | -> | Plus |
X | 8437080..8437294 | 1..215 | 100 | -> | Plus |
X | 8439109..8439758 | 216..865 | 100 | -> | Plus |
X | 8439819..8440294 | 866..1341 | 100 | -> | Plus |
X | 8440545..8440936 | 1463..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8440361..8440481 | 1342..1462 | 100 | -> | Plus |
X | 8437080..8437294 | 1..215 | 100 | -> | Plus |
X | 8439109..8439758 | 216..865 | 100 | -> | Plus |
X | 8439819..8440294 | 866..1341 | 100 | -> | Plus |
X | 8440545..8440936 | 1463..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8440361..8440481 | 1342..1462 | 100 | -> | Plus |
X | 8437080..8437294 | 1..215 | 100 | -> | Plus |
X | 8439109..8439758 | 216..865 | 100 | -> | Plus |
X | 8439819..8440294 | 866..1341 | 100 | -> | Plus |
X | 8440545..8440936 | 1463..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8331113..8331327 | 1..215 | 100 | -> | Plus |
arm_X | 8333142..8333791 | 216..865 | 100 | -> | Plus |
arm_X | 8333852..8334327 | 866..1341 | 100 | -> | Plus |
arm_X | 8334394..8334514 | 1342..1462 | 100 | -> | Plus |
arm_X | 8334578..8334969 | 1463..1854 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8445178..8445392 | 1..215 | 100 | -> | Plus |
X | 8447207..8447856 | 216..865 | 100 | -> | Plus |
X | 8447917..8448392 | 866..1341 | 100 | -> | Plus |
X | 8448459..8448579 | 1342..1462 | 100 | -> | Plus |
X | 8448643..8449034 | 1463..1854 | 100 | Plus |
Translation from 211 to 1677
> LD46760.pep MSDNNSGSGGGGSGGGGAGNNNSANSGKNSTHRFAETSVITNQLLEKWRK NFYSEPKNLLAQNVCSRVDPFDVCLSRKALETTNHVFNYKVETEGKPVTN QRSSGRCWLFAALNCIRLPFMKNYNLDEFEFSQAFLFYWDKIERCNYFLN NVVKTAQRGEKVDGRLVSFLLLDPTSDGGQWDMLVNLITKHGLMPKKCFP ESFSCESSLRMNAILKSKLREYARNLRVLMEKNPTDEEIACKIQEQMAEI YKVVGICLGIPSETFTWEYYDKSKNYQSIGPVSSLEFYERYVKPHFNVED KVCLVTDPRPTSSYDQAYTVDCLGNVVGGRPVLYNNQSVELLLAVVTKSL KAGEAVWFGCEVSKRFASKQGIEDVDVHDFKLVFDIDIQTTFSKADRLIY GESAMTHAMVFTAVSVDKSGVAQKLRVENSWGEDRGEKGYLVMNADWFRE FGFEVVVDKKYVPEDVLRVFDMDPIVLPAWDPMGTLAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22364-PA | 510 | GF22364-PA | 40..510 | 20..488 | 2403 | 94.3 | Plus |
Dana\GF12272-PA | 521 | GF12272-PA | 17..474 | 40..463 | 755 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18250-PA | 486 | GG18250-PA | 1..486 | 1..488 | 2551 | 96.9 | Plus |
Dere\GG22041-PA | 475 | GG22041-PA | 5..473 | 40..486 | 740 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12231-PA | 492 | GH12231-PA | 39..492 | 35..488 | 2217 | 89 | Plus |
Dgri\GH20841-PA | 472 | GH20841-PA | 18..470 | 45..486 | 739 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1440-PA | 488 | CG1440-PA | 1..488 | 1..488 | 2589 | 100 | Plus |
CG1440-PD | 551 | CG1440-PD | 65..551 | 2..488 | 2581 | 99.8 | Plus |
CG1440-PC | 511 | CG1440-PC | 25..511 | 2..488 | 2581 | 99.8 | Plus |
CG1440-PB | 368 | CG1440-PB | 1..368 | 121..488 | 1944 | 100 | Plus |
CG13423-PA | 476 | CG13423-PA | 4..474 | 39..486 | 725 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15765-PA | 524 | GI15765-PA | 74..524 | 38..488 | 2334 | 94.7 | Plus |
Dmoj\GI20946-PA | 486 | GI20946-PA | 7..484 | 35..486 | 774 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20308-PA | 486 | GL20308-PA | 21..486 | 28..488 | 2304 | 91.2 | Plus |
Dper\GL17669-PA | 467 | GL17669-PA | 5..465 | 40..486 | 729 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12954-PA | 486 | GA12954-PA | 21..486 | 28..488 | 2305 | 91.2 | Plus |
Dpse\GA12276-PA | 467 | GA12276-PA | 5..465 | 40..486 | 742 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21572-PA | 543 | GM21572-PA | 65..543 | 2..488 | 2536 | 96.5 | Plus |
Dsec\GM22024-PA | 476 | GM22024-PA | 4..474 | 39..486 | 753 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16898-PA | 456 | GD16898-PA | 2..456 | 34..488 | 2434 | 98.7 | Plus |
Dsim\GD11522-PA | 476 | GD11522-PA | 4..474 | 39..486 | 754 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18622-PA | 510 | GJ18622-PA | 46..510 | 24..488 | 2325 | 91.2 | Plus |
Dvir\GJ20667-PA | 482 | GJ20667-PA | 18..480 | 45..486 | 733 | 33.1 | Plus |
Translation from 211 to 1677
> LD46760.hyp MSDNNSGSGGGGSGGGGAGNNNSANSGKNSTHRFAETSVITNQLLEKWRK NFYSEPKNLLAQNVCSRVDPFDVCLSRKALETTNHVFNYKVETEGKPVTN QRSSGRCWLFAALNCIRLPFMKNYNLDEFEFSQAFLFYWDKIERCNYFLN NVVKTAQRGEKVDGRLVSFLLLDPTSDGGQWDMLVNLITKHGLMPKKCFP ESFSCESSLRMNAILKSKLREYARNLRVLMEKNPTDEEIACKIQEQMAEI YKVVGICLGIPSETFTWEYYDKSKNYQSIGPVSSLEFYERYVKPHFNVED KVCLVTDPRPTSSYDQAYTVDCLGNVVGGRPVLYNNQSVELLLAVVTKSL KAGEAVWFGCEVSKRFASKQGIEDVDVHDFKLVFDIDIQTTFSKADRLIY GESAMTHAMVFTAVSVDKSGVAQKLRVENSWGEDRGEKGYLVMNADWFRE FGFEVVVDKKYVPEDVLRVFDMDPIVLPAWDPMGTLAQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1440-PA | 488 | CG1440-PA | 1..488 | 1..488 | 2589 | 100 | Plus |
CG1440-PD | 551 | CG1440-PD | 65..551 | 2..488 | 2581 | 99.8 | Plus |
CG1440-PC | 511 | CG1440-PC | 25..511 | 2..488 | 2581 | 99.8 | Plus |
CG1440-PB | 368 | CG1440-PB | 1..368 | 121..488 | 1944 | 100 | Plus |
CG13423-PA | 476 | CG13423-PA | 4..474 | 39..486 | 725 | 35.4 | Plus |